FFCP PHASE1:Hg19::chr11:2154122..2154138,+: Difference between revisions
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|id=chr11:2154122..2154138,+
|short_description=p4@CU674261
|description=CAGE_peak_4_at_CU674261_5end
|association_with_transcript=-79bp_to_CU674261_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-79bp_to_CU674261_5end | |||
|cluster_id=chr11:2154122..2154138,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_4_at_CU674261_5end | |||
|id=chr11:2154122..2154138,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.39e-28;19!CL:0002577;1.89e-12;3!CL:0000669;6.96e-10;4!CL:0002575;1.14e-09;2!CL:0002536;2.55e-09;2!CL:0002537;6.91e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.57e-28,19;CL:0002577,9.53e-13,3;CL:0000669,1.01e-09,4;CL:0002575,1.15e-09,2;CL:0002536,2.84e-09,2;CL:0002537,7.26e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.67e-09;11!UBERON:0009497;1.76e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.01e-18!14;UBERON:0000158!3.01e-18!14;UBERON:0000478!1.55e-12!24;UBERON:0003124!1.52e-11!7;UBERON:0002107!1.72e-09!19;UBERON:0006925!1.72e-09!19;UBERON:0008836!1.72e-09!19;UBERON:0008835!4.99e-09!22;UBERON:0003894!4.99e-09!22;UBERON:0009854!1.74e-08!23;UBERON:0000305!1.76e-08!7;UBERON:0005256!1.02e-07!143;UBERON:0003929!1.46e-07!54;UBERON:0007499!1.54e-07!25;UBERON:0009497!1.54e-07!25;UBERON:0000015!1.54e-07!25;UBERON:0002423!1.54e-07!25;UBERON:0006235!1.54e-07!25;UBERON:0004161!1.54e-07!25;UBERON:0001987!2.36e-07!4;UBERON:0004340!2.36e-07!4;UBERON:0004871!2.80e-07!8;UBERON:0005057!3.69e-07!26;UBERON:0009856!4.02e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;7.15e-22;24!UBERON:0005631;1.54e-19;10!UBERON:0000158;1.54e-19;10!UBERON:0000305;1.59e-14;7!UBERON:0001987;1.89e-09;4!UBERON:0002107;3.28e-09;19!UBERON:0006925;3.28e-09;19!UBERON:0002423;9.10e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.74e-27,14;UBERON:0000158,1.74e-27,14;UBERON:0000478,5.16e-22,24;UBERON:0003124,1.12e-14,7;UBERON:0000305,1.81e-14,7;UBERON:0004871,1.28e-12,8;UBERON:0001987,1.14e-09,4;UBERON:0004340,1.14e-09,4;UBERON:0002107,3.47e-09,19;UBERON:0006925,3.47e-09,19;UBERON:0008836,3.47e-09,19;UBERON:0008835,8.42e-08,22;UBERON:0003894,8.42e-08,22;UBERON:0009854,2.03e-07,23;UBERON:0007499,9.48e-07,25;UBERON:0009497,9.48e-07,25;UBERON:0000015,9.48e-07,25;UBERON:0002423,9.48e-07,25;UBERON:0006235,9.48e-07,25;UBERON:0004161,9.48e-07,25 | |||
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| ||
|short_description=p4@CU674261 | |||
}} | }} |
Latest revision as of 21:01, 23 July 2015
Short description: | p4@CU674261 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CU674261_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -79bp_to_CU674261_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.57e-28 | 19 |
placental epithelial cell | 9.53e-13 | 3 |
pericyte cell | 1.01e-09 | 4 |
central nervous system pericyte | 1.15e-09 | 2 |
amniotic epithelial cell | 2.84e-09 | 2 |
amnion mesenchymal stem cell | 7.26e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.74e-27 | 14 |
membranous layer | 1.74e-27 | 14 |
extraembryonic structure | 5.16e-22 | 24 |
chorion | 1.12e-14 | 7 |
amnion | 1.81e-14 | 7 |
somatic layer of lateral plate mesoderm | 1.28e-12 | 8 |
placenta | 1.14e-09 | 4 |
allantois | 1.14e-09 | 4 |
liver | 3.47e-09 | 19 |
digestive gland | 3.47e-09 | 19 |
liver bud | 3.47e-09 | 19 |
hepatic diverticulum | 8.42e-08 | 22 |
liver primordium | 8.42e-08 | 22 |
digestive tract diverticulum | 2.03e-07 | 23 |
epithelial sac | 9.48e-07 | 25 |
epithelium of foregut-midgut junction | 9.48e-07 | 25 |
anatomical boundary | 9.48e-07 | 25 |
hepatobiliary system | 9.48e-07 | 25 |
foregut-midgut junction | 9.48e-07 | 25 |
septum transversum | 9.48e-07 | 25 |