FFCP PHASE1:Hg19::chr11:2153356..2153374,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:2153356..2153374,-
|short_description=p7@IGF2
|description=CAGE_peak_7_at_IGF2_5end
|association_with_transcript=-391bp_to_AF318382_5end
|EntrezGene=3481...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P09565 | |UniProt=P09565 | ||
|association_with_transcript=-391bp_to_AF318382_5end | |||
|cluster_id=chr11:2153356..2153374,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_7_at_IGF2_5end | |||
|id=chr11:2153356..2153374,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.25e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.21e-10,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-16!115;UBERON:0000481!2.24e-16!347;UBERON:0000475!3.07e-14!365;UBERON:0000468!5.29e-13!659;UBERON:0000119!1.33e-11!312;UBERON:0000483!3.84e-11!309;UBERON:0005631!6.99e-11!14;UBERON:0000158!6.99e-11!14;UBERON:0000922!1.26e-10!612;UBERON:0000064!1.40e-10!219;UBERON:0000062!1.84e-10!511;UBERON:0002616!8.57e-10!59;UBERON:0003075!1.26e-09!86;UBERON:0007284!1.26e-09!86;UBERON:0004119!2.79e-09!169;UBERON:0000925!2.79e-09!169;UBERON:0006595!2.79e-09!169;UBERON:0001049!4.17e-09!57;UBERON:0005068!4.17e-09!57;UBERON:0006241!4.17e-09!57;UBERON:0007135!4.17e-09!57;UBERON:0002100!4.21e-09!216;UBERON:0005743!5.60e-09!86;UBERON:0002050!6.26e-09!605;UBERON:0005423!6.26e-09!605;UBERON:0001017!8.14e-09!82;UBERON:0000955!8.96e-09!69;UBERON:0006238!8.96e-09!69;UBERON:0000477!1.18e-08!286;UBERON:0000923!1.30e-08!604;UBERON:0005291!1.30e-08!604;UBERON:0006598!1.30e-08!604;UBERON:0002532!1.30e-08!604;UBERON:0002346!1.61e-08!90;UBERON:0000153!1.80e-08!129;UBERON:0007811!1.80e-08!129;UBERON:0000467!2.30e-08!625;UBERON:0000033!3.27e-08!123;UBERON:0000480!3.31e-08!626;UBERON:0005256!5.29e-08!143;UBERON:0004121!6.73e-08!169;UBERON:0000478!2.02e-07!24;UBERON:0005177!2.69e-07!107;UBERON:0000073!2.73e-07!94;UBERON:0001016!2.73e-07!94;UBERON:0002417!2.78e-07!61;UBERON:0000916!2.78e-07!61;UBERON:0003104!2.81e-07!238;UBERON:0009142!2.81e-07!238;UBERON:0000924!3.04e-07!173;UBERON:0006601!3.04e-07!173;UBERON:0001008!4.30e-07!45;UBERON:0004111!4.90e-07!241;UBERON:0000466!5.66e-07!126;UBERON:0006554!6.76e-07!44;UBERON:0004923!8.91e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.76e-09;24!UBERON:0005631;3.11e-09;10!UBERON:0000158;3.11e-09;10!UBERON:0002107;1.47e-07;19!UBERON:0006925;1.47e-07;19!UBERON:0000305;8.61e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.68e-13,114;UBERON:0005631,1.95e-12,14;UBERON:0000158,1.95e-12,14;UBERON:0011216,3.79e-12,223;UBERON:0004119,1.25e-10,160;UBERON:0000925,1.25e-10,160;UBERON:0006595,1.25e-10,160;UBERON:0003104,1.54e-10,160;UBERON:0009142,1.54e-10,160;UBERON:0000478,2.73e-09,24;UBERON:0001008,1.23e-08,48;UBERON:0000119,1.77e-08,309;UBERON:0006554,2.09e-08,47;UBERON:0000483,2.95e-08,306;UBERON:0002107,1.75e-07,19;UBERON:0006925,1.75e-07,19;UBERON:0008836,1.75e-07,19;UBERON:0002417,1.98e-07,60;UBERON:0000916,1.98e-07,60;UBERON:0003124,3.02e-07,7;UBERON:0003075,6.94e-07,82;UBERON:0007284,6.94e-07,82;UBERON:0001007,7.63e-07,145;UBERON:0001555,7.63e-07,145;UBERON:0007026,7.63e-07,145;UBERON:0000305,8.54e-07,7 | |||
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|phase1_expression=15.0793054794562,10.2768251467672,3.10099689011137,13.009528785907,8.49226079411847,22.6808016266096,0,0,0.261185628199839,11.0580271425679,5.58240934377942,470.304274196261,292.781345833583,29.5801583574511,24.8548031795937,0,0,0,0,5.0479633811483,16.3200552995402,17.2400096812948,0.572471974262113,0.136874425072884,1.25542639594803,0,0,0,0,0,6.50227717927519,0,0,0.739508020333575,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87019353423379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.639312809217652,0,2.50668955317945,24.9136012612617,0,1.94653948121054,2.6469748805939,2.21729397462564,5.35792192728069,4.51877810467109,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,5.77747888074142,0,1.03366703667732,0,3.68192674041137,0,0,0.24406205754817,0.367663080345869,1.62028389576352,0.267899184852239,0,0.225222960966644,0,0,2.38162267109529,0,0,4.79703457356788,0,0.25326102332916,0,0,0,2.24271040056923,0,0.24666754841716,0,0.67355336034844,0.163461903113459,39.9583608982619,209.15186058624,3.04617861383936,0,0,0.448346041655403,0,0.161872944368132,0,0,3.0708579327942,0,34.4520828611796,67.2566047637675,0,0,5.05008341862199,2.75260743718321,0.554128230968366,3.07284334616587,0.919463387397059,3.75595147266492,3.06266894532057,0.179389635688862,4.91181994282705,0.211931901159562,0,0,0,0,0.337552664482532,0,0,0.276149695926898,7.92065678412178,0,0,4.57813599238317,0,0,0,0.731842236777572,0.397589304964456,42.9917588617218,25.9152637538426,17.1578178595427,0.36497735907583,0,0.643240938192885,0,180.63912400444,7.21879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,7.4083322039652,29.4017422771084,110.276880294993,48.1585336172037,142.9711574169,0,298.61592878268,0.514703430895577,0,0,0,19.8139272639253,1.95484983186195,0,2.88662684050547,4.86907700895323,0,0,0,0.380508304469197,0,0,0,0,0,0,0.335964256397719,0,0.179117045405697,0,0,0.492663237895943,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.897048674762886,15.6945624779981,2.7868548611961,0,3.57656445851882,1.690605505112,25.7959973087324,16.6411899058186,11.8315392160585,14.1849132023278,3.99633268524149,91.2199599538981,761.840733969586,30.4598924608884,0,66.1029024661135,18.2148930774689,0,0,0,0,0,0,0,0,1.42636905040718,23.3097903734803,21.5750138677903,3.40215830155802,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,91.2824698390401,79.5271128484887,24.1425871092765,71.3340055050668,42.2876703449273,48.4146414154179,58.4535660813639,2.40756879782175,11.3703752027992,7.24311499047534,0.664225598535437,2.02806085395873,0.260650843404249,311.715442680683,309.515368277392,0,0,0,134.891769293585,346.185714181834,213.789937384084,2.23297027036899,11.0492620767405,4.49056151092918,0.640695746278505,30.1907276949355,6.75586468803151,4.45254199334973,0,0,0,6.23105315020345,0,398.59446475317,4.41114234667227,4.41988746892302,20.3221573251354,18.7553903046919,21.5044040533456,2.70719767744447,14.47888337563,2.35304930753057,1.46139224653261,3.37765212457202,1.13733384070897,0.680374821106063,14.8981982110476,6.16909010761157,17.8824648778943,9.03041592938736,0,0,0.447749509444357,2.41185864310528,0.784306353074702,0,2.29610251989794,1.30151357865721,54.8178181965882,1.37354197227515,0.495056999523528,0,0,0,16.4340221096607,0.770243085573222,1.99554777143968,5.92697261683481,1.82614416276065,10.0061518800818,6.81813019328807,253.652269557555,9.25595526021477,5.18913181885787,2.29702882490251,4.75441570021085,0.929691098594572,0.94443704049192,0,0.308033580176089,0,0,0,0,11.16475108079,30.3724247729977,11.6284418293533,3.58256907835867,56.0600074324436,0,0,30.3984453315802,7.13796277313742,4.47687128913608,0,0,0,42.4241353007944,0,0,46.8194696129391,3.53513579884282,0,0.551365343546124,0,0,0.578775534266688,1.9676842561399,0,0.30982349809975,0.281695602532241,7.17056761020257,26.8219881965821,0,0,0.211107635297664,2.63435914367922,5.31262443272001,1.04980416073495,0.192444225451024,0,0,45.5655995759611,48.647107111849,6.73885902670502,29.7098202869573,88.6732324798864,0,0.764637207142375,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.6953456948366,0,0,0,0,14.7973261064613,0,0,6.5351313765475,708.832375186202,271.128753600199,949.740890890826,7.95318118213038,1.26602474769461,0,0,43.9140848906226,12.1541272833153,1.93398740871803,6.04638594850262,0,0,0.622079175323615,0,0,0,10.7521312144258,0,0,0,3.52518773015035,1.99613798001194,0,0,7.97499532978273,0.1137934482855,1.5255219017566,0,4.48166385213904,0,0,5.31444831488303,0.60298219312704,0,6.08185929621735,1.47773809476774,7.45910350323507,0,0,28.3946453879011,0,56.0270287662986,0.269272933229316,0,572.607081718795,58.9888501507993,1950.9072802282,0,0,0,0,0,0,0,0,0,0.652931232636591,38.8720946443337,0,0.995261931078505,2.65372693510018,23.2191455074778,0,0,0,3.70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| ||
|short_description=p7@IGF2 | |||
}} | }} |
Latest revision as of 07:46, 17 September 2015
Short description: | p7@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -391bp_to_AF318382_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P09565 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.21e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.68e-13 | 114 |
extraembryonic membrane | 1.95e-12 | 14 |
membranous layer | 1.95e-12 | 14 |
organ system subdivision | 3.79e-12 | 223 |
endoderm-derived structure | 1.25e-10 | 160 |
endoderm | 1.25e-10 | 160 |
presumptive endoderm | 1.25e-10 | 160 |
mesenchyme | 1.54e-10 | 160 |
entire embryonic mesenchyme | 1.54e-10 | 160 |
extraembryonic structure | 2.73e-09 | 24 |
renal system | 1.23e-08 | 48 |
cell layer | 1.77e-08 | 309 |
urinary system structure | 2.09e-08 | 47 |
epithelium | 2.95e-08 | 306 |
liver | 1.75e-07 | 19 |
digestive gland | 1.75e-07 | 19 |
liver bud | 1.75e-07 | 19 |
abdominal segment of trunk | 1.98e-07 | 60 |
abdomen | 1.98e-07 | 60 |
chorion | 3.02e-07 | 7 |
neural plate | 6.94e-07 | 82 |
presumptive neural plate | 6.94e-07 | 82 |
digestive system | 7.63e-07 | 145 |
digestive tract | 7.63e-07 | 145 |
primitive gut | 7.63e-07 | 145 |
amnion | 8.54e-07 | 7 |