FFCP PHASE1:Hg19::chr1:111148241..111148250,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3737 | |EntrezGene=3737 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6220 | |HGNC=6220 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=93bp_to_uc001dzu.2_5end | |association_with_transcript=93bp_to_uc001dzu.2_5end | ||
|cluster_id=chr1:111148241..111148250,- | |||
|coexpression_cluster_id=C787 | |||
|description=CAGE_peak_25_at_KCNA2_5end | |description=CAGE_peak_25_at_KCNA2_5end | ||
|id=chr1:111148241..111148250,- | |id=chr1:111148241..111148250,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.04e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.56e-60!57;UBERON:0005068!7.56e-60!57;UBERON:0006241!7.56e-60!57;UBERON:0007135!7.56e-60!57;UBERON:0001017!1.44e-53!82;UBERON:0000955!2.55e-53!69;UBERON:0006238!2.55e-53!69;UBERON:0002616!3.48e-52!59;UBERON:0005743!5.53e-51!86;UBERON:0000073!6.01e-46!94;UBERON:0001016!6.01e-46!94;UBERON:0003075!7.21e-43!86;UBERON:0007284!7.21e-43!86;UBERON:0002346!7.71e-41!90;UBERON:0007023!3.11e-38!115;UBERON:0001950!5.72e-38!20;UBERON:0001893!1.27e-37!34;UBERON:0002780!4.16e-36!41;UBERON:0001890!4.16e-36!41;UBERON:0006240!4.16e-36!41;UBERON:0003080!3.26e-35!42;UBERON:0002619!1.53e-34!22;UBERON:0001869!3.98e-34!32;UBERON:0002791!7.29e-33!33;UBERON:0002020!4.45e-32!34;UBERON:0003528!4.45e-32!34;UBERON:0000956!2.18e-30!25;UBERON:0000203!2.18e-30!25;UBERON:0000033!7.43e-29!123;UBERON:0000153!2.23e-27!129;UBERON:0007811!2.23e-27!129;UBERON:0003076!7.14e-27!15;UBERON:0003057!7.14e-27!15;UBERON:0004733!4.78e-25!12;UBERON:0002028!4.78e-25!12;UBERON:0007277!4.78e-25!12;UBERON:0004121!1.98e-24!169;UBERON:0000924!8.53e-24!173;UBERON:0006601!8.53e-24!173;UBERON:0003056!1.07e-23!61;UBERON:0002680!1.42e-23!9;UBERON:0001895!1.42e-23!9;UBERON:0010092!1.42e-23!9;UBERON:0004732!4.32e-23!13;UBERON:0000200!1.56e-22!6;UBERON:0001871!1.73e-16!7;UBERON:0000025!1.86e-15!194;UBERON:0002037!2.84e-13!6;UBERON:0006215!2.84e-13!6;UBERON:0000988!1.53e-12!3;UBERON:0002771!7.78e-12!3;UBERON:0004111!9.01e-12!241;UBERON:0002298!3.20e-10!8;UBERON:0002581!5.31e-10!1;UBERON:0007190!6.31e-10!1;UBERON:0002022!6.88e-10!1;UBERON:0002902!8.17e-10!1;UBERON:0009899!8.17e-10!1;UBERON:0000483!1.67e-09!309;UBERON:0000119!2.24e-09!312;UBERON:0000477!2.30e-09!286;UBERON:0002336!2.46e-09!1;UBERON:0001018!2.46e-09!1;UBERON:0002473!2.46e-09!1;UBERON:0005340!2.46e-09!1;UBERON:0002316!2.46e-09!1;UBERON:0003544!2.46e-09!1;UBERON:0001020!2.46e-09!1;UBERON:0005970!2.46e-09!1;UBERON:0002437!2.46e-09!1;UBERON:0001882!2.67e-09!1;UBERON:0005403!2.67e-09!1;UBERON:0000064!3.44e-09!219;UBERON:0000475!1.90e-08!365;UBERON:0002021!8.83e-08!5;UBERON:0001872!1.12e-07!5;UBERON:0000349!2.16e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0000988;5.04e-34;3!UBERON:0004733;5.97e-34;12!UBERON:0002028;5.97e-34;12!UBERON:0004732;1.86e-31;13!UBERON:0002037;8.34e-18;6!UBERON:0002298;8.34e-18;6!UBERON:0000073;1.92e-07;53!UBERON:0002616;1.92e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0000988,5.96e-34,3;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0002037,7.67e-18,6;UBERON:0006215,7.67e-18,6;UBERON:0002298,9.07e-18,6;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p25@KCNA2 | |short_description=p25@KCNA2 | ||
}} | }} |
Latest revision as of 01:06, 16 September 2015
Short description: | p25@KCNA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_KCNA2_5end |
Coexpression cluster: | C787_cerebellum_pons_locus_brain_medulla_paracentral_temporal |
Association with transcript: | 93bp_to_uc001dzu.2_5end |
EntrezGene: | KCNA2 |
HGNC: | 6220 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
pons | 5.96e-34 | 3 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
cerebellum | 7.67e-18 | 6 |
rhombic lip | 7.67e-18 | 6 |
brainstem | 9.07e-18 | 6 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |