FFCP PHASE1:Hg19::chr1:110625257..110625270,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_ENST00000554808_5end | |association_with_transcript=-39bp_to_ENST00000554808_5end | ||
|cluster_id=chr1:110625257..110625270,+ | |||
|coexpression_cluster_id=C465 | |||
|description=CAGE_peak_2_at_ENST00000554808_5end | |description=CAGE_peak_2_at_ENST00000554808_5end | ||
|id=chr1:110625257..110625270,+ | |id=chr1:110625257..110625270,+ | ||
|ontology_enrichment_celltype=CL:0002620!3.81e-12!23;CL:0000057!1.79e-10!75;CL:0000708!4.78e-09!3;CL:0000197!2.33e-08!6;CL:0000098!2.33e-08!6;CL:0002167!2.33e-08!6 | |ontology_enrichment_celltype=CL:0002620!3.81e-12!23;CL:0000057!1.79e-10!75;CL:0000708!4.78e-09!3;CL:0000197!2.33e-08!6;CL:0000098!2.33e-08!6;CL:0002167!2.33e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000197;2.95e-34;6!CL:0000098;2.95e-34;6!CL:0002167;2.95e-34;6!CL:0002550;8.05e-14;1!CL:0002574;1.51e-13;1!CL:0002620;1.96e-13;23!CL:0000710;1.71e-10;20!CL:0000075;8.00e-08;27!CL:0002367;1.50e-07;2!CL:0002549;2.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.95e-34,6;CL:0000098,2.95e-34,6;CL:0002167,2.95e-34,6;CL:0002550,7.55e-14,1;CL:0002574,1.42e-13,1;CL:0002620,2.12e-13,23;CL:0000710,1.71e-10,20;CL:0000075,8.01e-08,27;CL:0002367,1.64e-07,2;CL:0002549,1.75e-07,2;CL:0000057,2.16e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0010115;5.85e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.73e-10!129;UBERON:0007811!1.73e-10!129;UBERON:0000033!1.80e-10!123;UBERON:0003210!4.78e-09!3;UBERON:0003102!8.70e-09!95;UBERON:0007023!1.27e-08!115;UBERON:0005743!2.14e-07!86;UBERON:0000924!2.29e-07!173;UBERON:0006601!2.29e-07!173;UBERON:0002199!3.10e-07!45;UBERON:0002416!3.10e-07!45;UBERON:0002097!3.78e-07!40;UBERON:0004121!4.75e-07!169;UBERON:0001017!5.24e-07!82;UBERON:0002346!5.67e-07!90;UBERON:0002616!7.88e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;5.85e-14;1!UBERON:0002360;1.28e-07;2!UBERON:0000094;1.28e-07;2!UBERON:0010743;1.28e-07;2!UBERON:0005969;1.50e-07;2!UBERON:0003956;1.50e-07;2!UBERON:0005629;2.05e-07;2!UBERON:0005358;2.05e-07;2!UBERON:0001886;2.05e-07;2!UBERON:0004086;2.05e-07;2!UBERON:0005282;2.05e-07;2!UBERON:0005281;2.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,5.85e-14,1;UBERON:0007645,5.85e-14,1;UBERON:0007647,5.85e-14,1;UBERON:0010115,5.85e-14,1;UBERON:0002360,1.28e-07,2;UBERON:0000094,1.28e-07,2;UBERON:0010743,1.28e-07,2;UBERON:0005969,1.64e-07,2;UBERON:0003956,1.64e-07,2;UBERON:0002097,1.73e-07,41;UBERON:0005629,1.75e-07,2;UBERON:0005358,1.75e-07,2;UBERON:0001886,1.75e-07,2;UBERON:0004086,1.75e-07,2;UBERON:0005282,1.75e-07,2;UBERON:0005281,1.75e-07,2 | |||
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| ||
|short_description=p2@ENST00000554808 | |short_description=p2@ENST00000554808 | ||
}} | }} |
Latest revision as of 19:29, 27 July 2015
Short description: | p2@ENST00000554808 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000554808_5end |
Coexpression cluster: | C465_Olfactory_basal_Fibroblast_Preadipocyte_Adipocyte_small_Prostate |
Association with transcript: | -39bp_to_ENST00000554808_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.95e-34 | 6 |
sensory epithelial cell | 2.95e-34 | 6 |
olfactory epithelial cell | 2.95e-34 | 6 |
fibroblast of the conjuctiva | 7.55e-14 | 1 |
stromal cell of pancreas | 1.42e-13 | 1 |
skin fibroblast | 2.12e-13 | 23 |
neurecto-epithelial cell | 1.71e-10 | 20 |
columnar/cuboidal epithelial cell | 8.01e-08 | 27 |
trabecular meshwork cell | 1.64e-07 | 2 |
fibroblast of choroid plexus | 1.75e-07 | 2 |
fibroblast | 2.16e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
dura mater | 5.85e-14 | 1 |
future meninx | 5.85e-14 | 1 |
ectomeninx | 5.85e-14 | 1 |
future dura mater | 5.85e-14 | 1 |
meninx | 1.28e-07 | 2 |
membrane organ | 1.28e-07 | 2 |
meningeal cluster | 1.28e-07 | 2 |
reticulum trabeculare | 1.64e-07 | 2 |
aqueous drainage system | 1.64e-07 | 2 |
skin of body | 1.73e-07 | 41 |
vascular plexus | 1.75e-07 | 2 |
ventricle of nervous system | 1.75e-07 | 2 |
choroid plexus | 1.75e-07 | 2 |
brain ventricle | 1.75e-07 | 2 |
ventricular system of brain | 1.75e-07 | 2 |
ventricular system of central nervous system | 1.75e-07 | 2 |