FFCP PHASE1:Hg19::chr1:109242036..109242049,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55119 | |EntrezGene=55119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25512 | |HGNC=25512 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VTL8 | |UniProt=Q5VTL8 | ||
|association_with_transcript=-154bp_to_AY211915_5end | |association_with_transcript=-154bp_to_AY211915_5end | ||
|cluster_id=chr1:109242036..109242049,+ | |||
|coexpression_cluster_id=C1037 | |||
|description=CAGE_peak_5_at_PRPF38B_5end | |description=CAGE_peak_5_at_PRPF38B_5end | ||
|id=chr1:109242036..109242049,+ | |id=chr1:109242036..109242049,+ | ||
|ontology_enrichment_celltype=CL:0002032!8.89e-13!165;CL:0000837!8.89e-13!165;CL:0000037!2.67e-12!172;CL:0000566!2.67e-12!172;CL:0002087!4.47e-12!119;CL:0000988!1.31e-10!182;CL:0002031!1.92e-10!124;CL:0000860!5.16e-10!45;CL:0000738!5.18e-09!140;CL:0002057!1.23e-08!42;CL:0000763!2.27e-08!112;CL:0000049!2.27e-08!112;CL:0002194!8.42e-08!63;CL:0000576!8.42e-08!63;CL:0000040!8.42e-08!63;CL:0000559!8.42e-08!63;CL:0000839!2.24e-07!70;CL:0002009!4.24e-07!65 | |ontology_enrichment_celltype=CL:0002032!8.89e-13!165;CL:0000837!8.89e-13!165;CL:0000037!2.67e-12!172;CL:0000566!2.67e-12!172;CL:0002087!4.47e-12!119;CL:0000988!1.31e-10!182;CL:0002031!1.92e-10!124;CL:0000860!5.16e-10!45;CL:0000738!5.18e-09!140;CL:0002057!1.23e-08!42;CL:0000763!2.27e-08!112;CL:0000049!2.27e-08!112;CL:0002194!8.42e-08!63;CL:0000576!8.42e-08!63;CL:0000040!8.42e-08!63;CL:0000559!8.42e-08!63;CL:0000839!2.24e-07!70;CL:0002009!4.24e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.55e-09;33!CL:0002057;8.55e-09;33!CL:0000473;3.44e-07;39!CL:0000234;3.44e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.32e-10,115;CL:0002032,2.29e-10,161;CL:0000837,2.29e-10,161;CL:0000037,4.92e-10,168;CL:0000988,4.39e-09,177;CL:0002031,1.73e-08,120;CL:0000860,3.33e-08,42;CL:0002057,3.33e-08,42;CL:0000473,1.05e-07,48;CL:0000234,1.05e-07,48;CL:0000738,4.27e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;6.44e-07;42 | |||
|ontology_enrichment_disease=DOID:162!2.47e-20!235;DOID:14566!3.24e-19!239;DOID:2531!4.05e-10!51;DOID:0060083!4.05e-10!51;DOID:0050687!1.08e-09!143;DOID:0050686!2.04e-09!137;DOID:1240!2.87e-08!39;DOID:305!5.04e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.98e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.89e-18,235;DOID:14566,9.46e-17,239;DOID:2531,1.24e-09,51;DOID:0060083,1.24e-09,51;DOID:0050687,2.17e-09,143;DOID:0050686,1.77e-08,137;DOID:1240,3.67e-08,39;DOID:305,1.63e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@PRPF38B | |short_description=p5@PRPF38B | ||
}} | }} |
Latest revision as of 20:00, 15 September 2015
Short description: | p5@PRPF38B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRPF38B_5end |
Coexpression cluster: | C1037_acute_medulloblastoma_Monocytederived_CD4_diffuse_testicular_small |
Association with transcript: | -154bp_to_AY211915_5end |
EntrezGene: | PRPF38B |
HGNC: | 25512 |
UniProt: | Q5VTL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.32e-10 | 115 |
hematopoietic oligopotent progenitor cell | 2.29e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.29e-10 | 161 |
hematopoietic stem cell | 4.92e-10 | 168 |
hematopoietic cell | 4.39e-09 | 177 |
hematopoietic lineage restricted progenitor cell | 1.73e-08 | 120 |
classical monocyte | 3.33e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.33e-08 | 42 |
defensive cell | 1.05e-07 | 48 |
phagocyte | 1.05e-07 | 48 |
leukocyte | 4.27e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.89e-18 | 235 |
disease of cellular proliferation | 9.46e-17 | 239 |
hematologic cancer | 1.24e-09 | 51 |
immune system cancer | 1.24e-09 | 51 |
cell type cancer | 2.17e-09 | 143 |
organ system cancer | 1.77e-08 | 137 |
leukemia | 3.67e-08 | 39 |
carcinoma | 1.63e-07 | 106 |