FFCP PHASE1:Hg19::chr1:103574154..103574165,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1301 | |EntrezGene=1301 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2186 | |HGNC=2186 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5Z5,P12107,Q59HB5,E9PCU0,Q149N0 | |UniProt=F5H5Z5,P12107,Q59HB5,E9PCU0,Q149N0 | ||
|association_with_transcript=-102bp_to_ENST00000353414,ENST00000358392,ENST00000370090,NM_001190709,NM_001854,NM_080629,NM_080630,uc001dul.2,uc001dum.2,uc001dun.2,uc009weh.2_5end | |association_with_transcript=-102bp_to_ENST00000353414,ENST00000358392,ENST00000370090,NM_001190709,NM_001854,NM_080629,NM_080630,uc001dul.2,uc001dum.2,uc001dun.2,uc009weh.2_5end | ||
|cluster_id=chr1:103574154..103574165,- | |||
|coexpression_cluster_id=C2510 | |||
|description=CAGE_peak_4_at_COL11A1_5end | |description=CAGE_peak_4_at_COL11A1_5end | ||
|id=chr1:103574154..103574165,- | |id=chr1:103574154..103574165,- | ||
|ontology_enrichment_celltype=CL:0000055!2.18e-15!180;CL:0000325!3.03e-09!39;CL:0000075!9.48e-07!27 | |ontology_enrichment_celltype=CL:0000055!2.18e-15!180;CL:0000325!3.03e-09!39;CL:0000075!9.48e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000062;7.08e-09;9!CL:0000136;1.69e-07;13!CL:0000306;3.22e-07;4!CL:0002222;3.22e-07;4!CL:0002224;3.22e-07;4!CL:0002569;9.29e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.30e-09,15;CL:0000062,3.20e-09,11;CL:0000375,3.20e-09,11;CL:0000335,3.20e-09,11;CL:0000306,2.81e-07,4;CL:0002222,2.81e-07,4;CL:0002224,2.81e-07,4;CL:0002569,8.47e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000335;2.90e-09;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.09e-17!86;UBERON:0000073!1.11e-15!94;UBERON:0001016!1.11e-15!94;UBERON:0000475!2.24e-15!365;UBERON:0001017!3.27e-15!82;UBERON:0003075!1.91e-13!86;UBERON:0007284!1.91e-13!86;UBERON:0000033!1.99e-13!123;UBERON:0000153!3.95e-13!129;UBERON:0007811!3.95e-13!129;UBERON:0002346!8.20e-13!90;UBERON:0004121!1.38e-12!169;UBERON:0003056!2.05e-12!61;UBERON:0000924!2.86e-12!173;UBERON:0006601!2.86e-12!173;UBERON:0000955!4.09e-12!69;UBERON:0006238!4.09e-12!69;UBERON:0002616!7.56e-12!59;UBERON:0001049!3.46e-10!57;UBERON:0005068!3.46e-10!57;UBERON:0006241!3.46e-10!57;UBERON:0007135!3.46e-10!57;UBERON:0007625!6.13e-10!11;UBERON:0001869!1.52e-08!32;UBERON:0002020!1.76e-08!34;UBERON:0003528!1.76e-08!34;UBERON:0001893!2.46e-08!34;UBERON:0002791!5.10e-08!33;UBERON:0003080!5.20e-08!42;UBERON:0002200!5.85e-08!11;UBERON:0006876!5.85e-08!11;UBERON:0002780!1.24e-07!41;UBERON:0001890!1.24e-07!41;UBERON:0006240!1.24e-07!41;UBERON:0003688!5.71e-07!6;UBERON:0002358!5.71e-07!6;UBERON:0003684!5.71e-07!6;UBERON:0001178!5.71e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.04e-13;11!UBERON:0006876;2.07e-11;11!UBERON:0003688;3.87e-11;6!UBERON:0002358;3.87e-11;6!UBERON:0003684;3.87e-11;6!UBERON:0001178;3.87e-11;6!UBERON:0005284;5.52e-09;5!UBERON:0011135;7.52e-09;5!UBERON:0002216;7.52e-09;5!UBERON:0011134;7.52e-09;5!UBERON:0002209;7.52e-09;5!UBERON:0002213;7.52e-09;5!UBERON:0007844;7.52e-09;5!UBERON:0011138;7.52e-09;5!UBERON:0001130;7.52e-09;5!UBERON:0001066;7.52e-09;5!UBERON:0001468;7.52e-09;5!UBERON:0000970;9.09e-08;20!UBERON:0000020;1.28e-07;23!UBERON:0002104;2.81e-07;21!UBERON:0010077;3.22e-07;4!UBERON:0005389;3.22e-07;4!UBERON:0000484;3.22e-07;4!UBERON:0000965;3.22e-07;4!UBERON:0001803;3.22e-07;4!UBERON:0001032;3.47e-07;24!UBERON:0004456;3.47e-07;24!UBERON:0000488;4.22e-07;4!UBERON:0004457;4.58e-07;9!UBERON:0000042;4.58e-07;9!UBERON:0000019;6.12e-07;19!UBERON:0000047;6.12e-07;19!UBERON:0004088;6.12e-07;19!UBERON:0010230;6.12e-07;19!UBERON:0003422;9.29e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,7.80e-14,11;UBERON:0006876,1.71e-11,11;UBERON:0003688,4.11e-11,6;UBERON:0002358,4.11e-11,6;UBERON:0003684,4.11e-11,6;UBERON:0001178,4.11e-11,6;UBERON:0005284,5.47e-09,5;UBERON:0011135,1.03e-08,5;UBERON:0002216,1.03e-08,5;UBERON:0011134,1.03e-08,5;UBERON:0002209,1.03e-08,5;UBERON:0002213,1.03e-08,5;UBERON:0005856,1.03e-08,5;UBERON:0005866,1.03e-08,5;UBERON:0005863,1.03e-08,5;UBERON:0007844,1.03e-08,5;UBERON:0011138,1.03e-08,5;UBERON:0001130,1.03e-08,5;UBERON:0001066,1.03e-08,5;UBERON:0001468,1.03e-08,5;UBERON:0000970,2.29e-07,21;UBERON:0002104,2.29e-07,21;UBERON:0010077,2.81e-07,4;UBERON:0005389,2.81e-07,4;UBERON:0000484,2.81e-07,4;UBERON:0002546,2.81e-07,4;UBERON:0000965,2.81e-07,4;UBERON:0001803,2.81e-07,4;UBERON:0003073,2.81e-07,4;UBERON:0005426,2.81e-07,4;UBERON:0000020,3.26e-07,24;UBERON:0001032,3.26e-07,24;UBERON:0004456,3.26e-07,24;UBERON:0000488,3.37e-07,4;UBERON:0003422,8.47e-07,6 | |||
|phase1_expression=3.81524596468169,7.70761886007539,4.93340414335899,6.00439790118782,9.83314407740033,2.61701557230111,2.53299878168311,2.52687949370732,0,0,0,0,0,2.22779435328084,7.62213964174206,0,0,0,0,0.492484232307152,0.612002073732759,0.313454721478088,3.43483184557268,2.46373965131192,3.76627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.869079113764942,7.95285947051099,41.8505988460267,3.97046232089085,2.4390233720882,2.98638271356629,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4666914686485,0,0,0,0,0,0,0,0,0,0,6.65972681637698,9.21881479167998,0,0,0,0,0.23486899728753,0.161872944368132,0,0.204154171254893,0.491337269247072,0.516628905878827,5.94001428641027,3.4617370098998,0,0,0,0.375355559615893,0,1.31693286264251,0.30648779579902,4.35690370829131,0,5.56107870635472,6.62027905337559,0,0,0.103052529238439,5.92573242104947,3.53622027030021,0,0,0.757301322732344,0.552299391853796,0.484938170456436,7.4552014428489,3.22406714328449,1.18692414617341,0,0,0,0,0.265059536642971,0.116193942869518,0.207322110030741,0,0,0,3.21620469096443,0,8.35862270457562,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.14703430895577,0,0,0,0,0,0,1.44331342025273,3.59384255422738,12.3279128947613,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.317489471460845,0.763976851116555,0,0,2.67351481028641,2.40274446275134,2.5724378936752,0.336393253036082,5.66748089483264,0.51336800074665,1.29271715757778,3.57656445851882,0,0.26593811658487,0,0.257207374262142,1.41849132023278,0.266422179016099,0,4.88359444852299,0,0.325736184293735,0.355391948742546,1.58390374586686,0,0,0.099972991182057,0,0,0,5.5113716763064,4.59447743336456,0,1.59259437334337,1.2328579353023,1.96967059563885,0,0,0,0,1.01637849688985,1.30139853857622,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,4.53958519360818,3.00102312635806,3.52644530809656,0.207970861530807,0.713715955188647,0.630809660135739,3.5142424497814,8.12554469264841,4.5481500811197,2.0694614258501,1.32845119707087,0.553107505625109,1.04260337361699,2.34961388955289,1.02943027143257,0,0,0,0,0,0,1.73675465473144,25.1677636192422,10.3844234940237,2.30650468660262,7.67560873600055,9.97294311090366,1.48418066444991,0.308419387605311,0,0,0,0,0,0,0,0,0,0.524497659837696,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0.671624264166535,0,0,3.07740150139667,2.62411716559765,0.976135183992909,0.103041011647722,8.33282129846925,3.79543699634705,0,0,0,0.290012154876366,0.308097234229289,0.921022048356777,0.964856007391714,1.82614416276065,2.61030049045611,0,0.712256285173899,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0,0,2.232950216158,4.11293252134344,2.85945290885737,0,1.28381696410176,0,0,0.539617372749944,0.54907405947211,0.471249609382746,0,0,0,0,0,0,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0.811641507850816,1.8589409885985,0.563391205064483,1.29070216983646,1.8667317792493,1.78335525740625,3.19284957663538,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1572127655407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,8.73795756596497,0,0,0,0,0,1.9882952955326,0.422008249231538,0,0,0,0.398495976502139,0,0,5.01116544260559,0,1.24415835064723,0,0,0,0.0986434056369336,0,0,2.90799823828566,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0.885741385813839,0.964771509003264,0,0.221158519862449,0,0.219385397153973,0,0,0.153900517007594,1.13942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0.61214552326098,2.84339608328196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58186518546373,0,0,0.443175571691151,0,0.400794101257669,0,0,0,0,0,0,0,0,0.271808412147228,0.313808538937,0,0,0,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0,0.470284307407084,0.360299883542404,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.303747783290123,0,0,0.157363764404994,0,0,0,0,0,0.5085370753095,0,0,0,3.59190574687462,0,0,0,0,0,0,1.05786081394152,0,0,0.320362237703084,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0.732157589411779,0.876336514945499,0,0.554645257684261,0.248385611765534,0.415045904808692,0,0,0,0,0,0,0,0.934853239388898,0,0.947015026375446,1.0062716070103,0,0,0,0.310874401165561,0,1.27437413730962,0,1.39736661188633,0,5.3168342911599,0,0.150257608997218,0,0.406870733204662,0.363697318405119,0.966695013382396,1.39210127963548,0,1.20008329398946,1.71697852591396,2.02049693259551,0,0,0,0,0.453411851024545,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.691292180758654,0,0,0,1.63804924423206,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0.218419276384028,0,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0.963438376446893,0,0.798169295285756,0,0.504143392443436,0.207471757392654,0.161475645631851,0,0,0,0,0,6.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|phase1_expression=3.81524596468169,7.70761886007539,4.93340414335899,6.00439790118782,9.83314407740033,2.61701557230111,2.53299878168311,2.52687949370732,0,0,0,0,0,2.22779435328084,7.62213964174206,0,0,0,0,0.492484232307152,0.612002073732759,0.313454721478088,3.43483184557268,2.46373965131192,3.76627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.869079113764942,7.95285947051099,41.8505988460267,3.97046232089085,2.4390233720882,2.98638271356629,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4666914686485,0,0,0,0,0,0,0,0,0,0,6.65972681637698,9.21881479167998,0,0,0,0,0.23486899728753,0.161872944368132,0,0.204154171254893,0.491337269247072,0.516628905878827,5.94001428641027,3.4617370098998,0,0,0,0.375355559615893,0,1.31693286264251,0.30648779579902,4.35690370829131,0,5.56107870635472,6.62027905337559,0,0,0.103052529238439,5.92573242104947,3.53622027030021,0,0,0.757301322732344,0.552299391853796,0.484938170456436,7.4552014428489,3.22406714328449,1.18692414617341,0,0,0,0,0.265059536642971,0.116193942869518,0.207322110030741,0,0,0,3.21620469096443,0,8.35862270457562,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.14703430895577,0,0,0,0,0,0,1.44331342025273,3.59384255422738,12.3279128947613,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.317489471460845,0.763976851116555,0,0,2.67351481028641,2.40274446275134,2.5724378936752,0.336393253036082,5.66748089483264,0.51336800074665,1.29271715757778,3.57656445851882,0,0.26593811658487,0,0.257207374262142,1.41849132023278,0.266422179016099,0,4.88359444852299,0,0.325736184293735,0.355391948742546,1.58390374586686,0,0,0.099972991182057,0,0,0,5.5113716763064,4.59447743336456,0,1.59259437334337,1.2328579353023,1.96967059563885,0,0,0,0,1.01637849688985,1.30139853857622,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,4.53958519360818,3.00102312635806,3.52644530809656,0.207970861530807,0.713715955188647,0.630809660135739,3.5142424497814,8.12554469264841,4.5481500811197,2.0694614258501,1.32845119707087,0.553107505625109,1.04260337361699,2.34961388955289,1.02943027143257,0,0,0,0,0,0,1.73675465473144,25.1677636192422,10.3844234940237,2.30650468660262,7.67560873600055,9.97294311090366,1.48418066444991,0.308419387605311,0,0,0,0,0,0,0,0,0,0.524497659837696,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0.671624264166535,0,0,3.07740150139667,2.62411716559765,0.976135183992909,0.103041011647722,8.33282129846925,3.79543699634705,0,0,0,0.290012154876366,0.308097234229289,0.921022048356777,0.964856007391714,1.82614416276065,2.61030049045611,0,0.712256285173899,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0,0,2.232950216158,4.11293252134344,2.85945290885737,0,1.28381696410176,0,0,0.539617372749944,0.54907405947211,0.471249609382746,0,0,0,0,0,0,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0.811641507850816,1.8589409885985,0.563391205064483,1.29070216983646,1.8667317792493,1.78335525740625,3.19284957663538,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1572127655407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,8.73795756596497,0,0,0,0,0,1.9882952955326,0.422008249231538,0,0,0,0.398495976502139,0,0,5.01116544260559,0,1.24415835064723,0,0,0,0.0986434056369336,0,0,2.90799823828566,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0.885741385813839,0.964771509003264,0,0.221158519862449,0,0.219385397153973,0,0,0.153900517007594,1.13942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0.61214552326098,2.84339608328196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58186518546373,0,0,0.443175571691151,0,0.400794101257669,0,0,0,0,0,0,0,0,0.271808412147228,0.313808538937,0,0,0,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0,0.470284307407084,0.360299883542404,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.303747783290123,0,0,0.157363764404994,0,0,0,0,0,0.5085370753095,0,0,0,3.59190574687462,0,0,0,0,0,0,1.05786081394152,0,0,0.320362237703084,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0.732157589411779,0.876336514945499,0,0.554645257684261,0.248385611765534,0.415045904808692,0,0,0,0,0,0,0,0.934853239388898,0,0.947015026375446,1.0062716070103,0,0,0,0.310874401165561,0,1.27437413730962,0,1.39736661188633,0,5.3168342911599,0,0.150257608997218,0,0.406870733204662,0.363697318405119,0.966695013382396,1.39210127963548,0,1.20008329398946,1.71697852591396,2.02049693259551,0,0,0,0,0.453411851024545,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.691292180758654,0,0,0,1.63804924423206,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0.218419276384028,0,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0.963438376446893,0,0.798169295285756,0,0.504143392443436,0.207471757392654,0.161475645631851,0,0,0,0,0,6.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| ||
|short_description=p4@COL11A1 | |short_description=p4@COL11A1 | ||
}} | }} |
Latest revision as of 06:33, 25 September 2015
Short description: | p4@COL11A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COL11A1_5end |
Coexpression cluster: | C2510_Preadipocyte_Chondrocyte_Osteoblast_Wilms_rhabdomyosarcoma_adrenal_Lens |
Association with transcript: | -102bp_to_ENST00000353414, ENST00000358392, ENST00000370090, NM_001190709, NM_001854, NM_080629, NM_080630, uc001dul.2, uc001dum.2, uc001dun.2, uc009weh.2_5end |
EntrezGene: | COL11A1 |
HGNC: | 2186 |
UniProt: | F5H5Z5P12107Q59HB5E9PCU0Q149N0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.30e-09 | 15 |
osteoblast | 3.20e-09 | 11 |
osteoprogenitor cell | 3.20e-09 | 11 |
mesenchyme condensation cell | 3.20e-09 | 11 |
crystallin accumulating cell | 2.81e-07 | 4 |
vertebrate lens cell | 2.81e-07 | 4 |
lens epithelial cell | 2.81e-07 | 4 |
mesenchymal stem cell of umbilical cord | 8.47e-07 | 6 |