FFCP PHASE1:Hg19::chr14:57271062..57271079,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:57271062..57271079,- | |||
|coexpression_cluster_id=C535 | |||
|description=CAGE_peak_at_chr14:57271062..57271079,- | |description=CAGE_peak_at_chr14:57271062..57271079,- | ||
|id=chr14:57271062..57271079,- | |id=chr14:57271062..57271079,- | ||
|ontology_enrichment_celltype=CL:0002586!1.98e-29!3;CL:0000149!3.00e-22!4;CL:0000147!3.85e-11!14;CL:0002322!2.00e-08!5;CL:0000540!2.53e-07!6;CL:0000031!2.53e-07!6;CL:0000404!2.53e-07!6 | |ontology_enrichment_celltype=CL:0002586!1.98e-29!3;CL:0000149!3.00e-22!4;CL:0000147!3.85e-11!14;CL:0002322!2.00e-08!5;CL:0000540!2.53e-07!6;CL:0000031!2.53e-07!6;CL:0000404!2.53e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002586;1.83e-14;3!CL:0000149;3.42e-11;4!CL:0000243;2.35e-10;15!CL:0000125;2.35e-10;15!CL:0000095;2.26e-09;17!CL:0002319;7.03e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.60e-14,3;CL:0000149,3.10e-11,4;CL:0000243,2.46e-10,15;CL:0000125,2.46e-10,15;CL:0000030,2.46e-10,15;CL:0000339,2.46e-10,15;CL:0000095,2.36e-09,17;CL:0000123,2.36e-09,17;CL:0002319,7.24e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.02e-15;10!UBERON:0003056;1.83e-14;3!CL:0000339;2.35e-10;15 | |||
|ontology_enrichment_disease=DOID:3095!1.53e-10!22;DOID:2994!1.53e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:3093;3.14e-14;11!DOID:5409;2.53e-11;4!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,3.36e-14,11;DOID:5409,2.53e-11,4;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.67e-47!5;UBERON:0005388!1.67e-47!5;UBERON:0001802!1.67e-47!5;UBERON:0001781!1.98e-29!3;UBERON:0001782!1.98e-29!3;UBERON:0005424!1.98e-29!3;UBERON:0000970!7.19e-17!20;UBERON:0002104!4.77e-16!21;UBERON:0000020!1.28e-14!23;UBERON:0001032!5.41e-14!24;UBERON:0004456!5.41e-14!24;UBERON:0005743!9.73e-14!86;UBERON:0000019!1.74e-12!19;UBERON:0000047!1.74e-12!19;UBERON:0004088!1.74e-12!19;UBERON:0003072!1.74e-12!19;UBERON:0003071!1.74e-12!19;UBERON:0004128!1.74e-12!19;UBERON:0000073!2.74e-12!94;UBERON:0001016!2.74e-12!94;UBERON:0001456!2.75e-11!21;UBERON:0002336!1.77e-10!1;UBERON:0001018!1.77e-10!1;UBERON:0002473!1.77e-10!1;UBERON:0005340!1.77e-10!1;UBERON:0002316!1.77e-10!1;UBERON:0003544!1.77e-10!1;UBERON:0001020!1.77e-10!1;UBERON:0005970!1.77e-10!1;UBERON:0002437!1.77e-10!1;UBERON:0002346!5.71e-09!90;UBERON:0007625!1.90e-08!11;UBERON:0005085!3.93e-08!29;UBERON:0003075!1.24e-07!86;UBERON:0007284!1.24e-07!86;UBERON:0000924!4.63e-07!173;UBERON:0006601!4.63e-07!173;UBERON:0003056!8.28e-07!61 | |ontology_enrichment_uberon=UBERON:0000966!1.67e-47!5;UBERON:0005388!1.67e-47!5;UBERON:0001802!1.67e-47!5;UBERON:0001781!1.98e-29!3;UBERON:0001782!1.98e-29!3;UBERON:0005424!1.98e-29!3;UBERON:0000970!7.19e-17!20;UBERON:0002104!4.77e-16!21;UBERON:0000020!1.28e-14!23;UBERON:0001032!5.41e-14!24;UBERON:0004456!5.41e-14!24;UBERON:0005743!9.73e-14!86;UBERON:0000019!1.74e-12!19;UBERON:0000047!1.74e-12!19;UBERON:0004088!1.74e-12!19;UBERON:0003072!1.74e-12!19;UBERON:0003071!1.74e-12!19;UBERON:0004128!1.74e-12!19;UBERON:0000073!2.74e-12!94;UBERON:0001016!2.74e-12!94;UBERON:0001456!2.75e-11!21;UBERON:0002336!1.77e-10!1;UBERON:0001018!1.77e-10!1;UBERON:0002473!1.77e-10!1;UBERON:0005340!1.77e-10!1;UBERON:0002316!1.77e-10!1;UBERON:0003544!1.77e-10!1;UBERON:0001020!1.77e-10!1;UBERON:0005970!1.77e-10!1;UBERON:0002437!1.77e-10!1;UBERON:0002346!5.71e-09!90;UBERON:0007625!1.90e-08!11;UBERON:0005085!3.93e-08!29;UBERON:0003075!1.24e-07!86;UBERON:0007284!1.24e-07!86;UBERON:0000924!4.63e-07!173;UBERON:0006601!4.63e-07!173;UBERON:0003056!8.28e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.34e-32;5!UBERON:0005388;2.34e-32;5!UBERON:0001802;2.34e-32;5!UBERON:0000970;1.60e-18;20!UBERON:0002104;1.10e-17;21!UBERON:0000020;3.17e-16;23!UBERON:0001032;1.38e-15;24!UBERON:0004456;1.38e-15;24!UBERON:0001781;1.83e-14;3!UBERON:0001782;1.83e-14;3!UBERON:0000019;2.46e-09;19!UBERON:0000047;2.46e-09;19!UBERON:0004088;2.46e-09;19!UBERON:0010230;2.46e-09;19!UBERON:0001456;1.53e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,3.55e-27,6;UBERON:0005388,3.55e-27,6;UBERON:0001802,3.55e-27,6;UBERON:0000970,1.10e-17,21;UBERON:0002104,1.10e-17,21;UBERON:0000020,1.38e-15,24;UBERON:0001032,1.38e-15,24;UBERON:0004456,1.38e-15,24;UBERON:0001782,1.60e-14,3;UBERON:0005424,1.60e-14,3;UBERON:0001781,3.10e-11,4;UBERON:0000019,6.42e-09,20;UBERON:0000047,6.42e-09,20;UBERON:0010312,6.42e-09,20;UBERON:0004088,6.42e-09,20;UBERON:0010230,6.42e-09,20;UBERON:0003072,6.42e-09,20;UBERON:0004128,6.42e-09,20;UBERON:0003071,6.42e-09,20;UBERON:0001456,3.39e-08,22 | |||
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|short_description=p@chr14:57271062..57271079,- | |short_description=p@chr14:57271062..57271079,- | ||
}} | }} |
Latest revision as of 21:22, 24 July 2015
Short description: | p@chr14:57271062..57271079, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:57271062..57271079, - |
Coexpression cluster: | C535_medulloblastoma_small_pineal_retinoblastoma_eye_Retinal_retina |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.60e-14 | 3 |
visual pigment cell | 3.10e-11 | 4 |
glial cell (sensu Vertebrata) | 2.46e-10 | 15 |
glial cell | 2.46e-10 | 15 |
glioblast | 2.46e-10 | 15 |
glioblast (sensu Vertebrata) | 2.46e-10 | 15 |
neuron associated cell | 2.36e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.36e-09 | 17 |
neural cell | 7.24e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
retina | 3.55e-27 | 6 |
photoreceptor array | 3.55e-27 | 6 |
posterior segment of eyeball | 3.55e-27 | 6 |
eye | 1.10e-17 | 21 |
visual system | 1.10e-17 | 21 |
sense organ | 1.38e-15 | 24 |
sensory system | 1.38e-15 | 24 |
entire sense organ system | 1.38e-15 | 24 |
pigmented layer of retina | 1.60e-14 | 3 |
presumptive retinal pigmented epithelium | 1.60e-14 | 3 |
layer of retina | 3.10e-11 | 4 |
camera-type eye | 6.42e-09 | 20 |
simple eye | 6.42e-09 | 20 |
immature eye | 6.42e-09 | 20 |
ocular region | 6.42e-09 | 20 |
eyeball of camera-type eye | 6.42e-09 | 20 |
optic cup | 6.42e-09 | 20 |
optic vesicle | 6.42e-09 | 20 |
eye primordium | 6.42e-09 | 20 |
face | 3.39e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.36e-14 | 11 |
lung small cell carcinoma | 2.53e-11 | 4 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |