FFCP PHASE1:Hg19::chr14:55034454..55034473,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23034 | |EntrezGene=23034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23023 | |HGNC=23023 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=104bp_to_ENST00000555112_5end | |association_with_transcript=104bp_to_ENST00000555112_5end | ||
|cluster_id=chr14:55034454..55034473,+ | |||
|description=CAGE_peak_6_at_SAMD4A_5end | |description=CAGE_peak_6_at_SAMD4A_5end | ||
|id=chr14:55034454..55034473,+ | |id=chr14:55034454..55034473,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.45e-13!180;CL:0000057!3.74e-10!75;CL:0002620!4.12e-07!23 | |ontology_enrichment_celltype=CL:0000055!9.45e-13!180;CL:0000057!3.74e-10!75;CL:0002620!4.12e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000138;2.59e-09;6!CL:0002581;5.12e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.96e-09,6;CL:0000138,2.96e-09,6;CL:0002581,3.20e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010115;5.12e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;1.80e-07;1!DOID:4549;1.80e-07;1!DOID:5861;1.80e-07;1!DOID:6496;1.80e-07;1!DOID:3112;5.12e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.10e-07,1;DOID:4549,2.10e-07,1;DOID:5861,2.10e-07,1;DOID:6496,2.10e-07,1;DOID:3112,4.85e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003513;7.31e-08;7!UBERON:0007195;1.80e-07;1!UBERON:0002363;5.12e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,7.33e-08,7;UBERON:0007195,1.86e-07,1;UBERON:0002363,3.82e-07,1;UBERON:0007645,3.82e-07,1;UBERON:0007647,3.82e-07,1;UBERON:0010115,3.82e-07,1 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.704772020479856,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0.61560529038394,0.612002073732759,0.313454721478088,0.572471974262113,0,0,0.152826811495903,0,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0.426507697462265,0,0,0,0.434021741431704,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,1.1384259382189,2.93618594685469,1.14681968437569,0,1.12101712596307,0.263384084775077,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.802320587350522,0.289648807765598,0,0,0,0,1.00267582127178,0.144846518960824,1.5905718941022,0.973269740605272,1.13441780596881,0,0.702678285545008,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.417989933073621,0.775250277507987,0,0.33472061276467,0.402829317109147,0,0,0,0,0.17859945656816,0.673588117878509,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0.926864265692532,1.72101972449288,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0.326923806226917,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0.149448680551801,0.352303495931295,0.485618833104395,0.421352420106746,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0.910161361938026,0,0.336672227908132,0.625592599359821,0.277064115484183,0.877955241761676,0.30648779579902,0.300476117813194,0,1.25572744982203,0.213557388818567,0.423863802319124,0.300091096084402,0.103052529238439,0.772921620136887,0.18611685633159,0.168776332241266,0.292311015483596,0.504867548488229,0.276149695926898,0.161646056818812,1.06502877754984,0.302256294682921,0.339121184620975,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0,0,0,0.769494313892781,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.352226082707465,0.433099343283221,0,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0,0,0.581267877027924,0,0,0,0.414656231081544,0.576479813667846,0.25248486685276,0.126995788584338,0,0,0,0.102827492703324,0.300343057843917,0.571652865261156,1.34557301214433,0.43596006883328,0.5867062865676,0.129271715757778,0,0,0.531876233169741,0,0,1.41849132023278,0,0.57191197463259,0,0,0.325736184293735,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.716243852959582,0,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.623912584592421,0.356857977594324,0.630809660135739,0.117141414992713,0.300946099727719,0,0,0,0.553107505625109,0.260650843404249,0.195801157462741,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0.496215615637554,1.38115775959256,0.841980283299221,0.384417447767103,0,0.482561763430822,1.48418066444991,0.308419387605311,0.177561725313127,0.410635780069046,1.03850885836724,0.232420756919918,0,0.200506470303285,0,0,0.364182336013434,0.262248829918848,0,0,0,2.92278449306521,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0.770243085573222,0.307007349452259,0.689182862422653,0.214840489736547,0.580066775656914,0.511359764496605,0.445160178233687,0.330569830721956,0.384380134730212,0.127612712494584,0,0,1.88887408098384,2.0911118104818,0,2.12922412126809,0,0.18532421910392,0.572499546967965,0.744316738719335,0,0,0.255897791311334,0,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0.141405431953713,0,1.10273068709225,1.32687795048244,0.876901770507525,0,0.655894752046633,0,0,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0.422215270595328,0,0,0,0,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0.222886768554957,0.284136146806413,0,0.296964680832639,0.307160702099232,0,0,0,0.16480387422676,0,0.19924798825107,0.276283915531148,0.251932747854276,0.20453736500431,0.369254416383208,0.933118762985422,0.629078458031288,0.537063524026827,0,0.887790650732402,0,2.22273980289274,0,0.185536196323703,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.442317039724898,0.295547618953547,0,0,0,0,0,0,0.269272933229316,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0.176915129006678,0.611030144933625,0.296521128680622,0,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0.30607276163049,1.39010475182674,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0,0.277349346026277,0.173559738335131,0.195984794828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| ||
|short_description=p6@SAMD4A | |short_description=p6@SAMD4A | ||
}} | }} |
Latest revision as of 07:57, 20 September 2015
Short description: | p6@SAMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SAMD4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 104bp_to_ENST00000555112_5end |
EntrezGene: | SAMD4A |
HGNC: | 23023 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.96e-09 | 6 |
chondrocyte | 2.96e-09 | 6 |
perirenal preadipocyte | 3.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 7.33e-08 | 7 |
stroma of bone marrow | 1.86e-07 | 1 |
dura mater | 3.82e-07 | 1 |
future meninx | 3.82e-07 | 1 |
ectomeninx | 3.82e-07 | 1 |
future dura mater | 3.82e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.10e-07 | 1 |
extraosseous chondrosarcoma | 2.10e-07 | 1 |
myxoid chondrosarcoma | 2.10e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 2.10e-07 | 1 |
papillary adenocarcinoma | 4.85e-07 | 1 |