FFCP PHASE1:Hg19::chr11:14993888..14993903,-: Difference between revisions
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|id=chr11:14993888..14993903,-
|short_description=p1@CALCA
|description=CAGE_peak_1_at_CALCA_5end
|association_with_transcript=0bp_to_ENST00000331587_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=796 | |EntrezGene=796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1437 | |HGNC=1437 | ||
|TSSclassifier=strong | |||
|UniProt=P01258 | |UniProt=P01258 | ||
|association_with_transcript=0bp_to_ENST00000331587_5end | |||
|cluster_id=chr11:14993888..14993903,- | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_1_at_CALCA_5end | |||
|id=chr11:14993888..14993903,- | |||
|ontology_enrichment_celltype=CL:0000453!7.89e-08!5;CL:0002322!1.11e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002298;1.16e-17;6!UBERON:0004732;5.46e-15;13!UBERON:0001896;2.44e-13;3!UBERON:0005290;2.44e-13;3!UBERON:0004733;3.56e-12;12!UBERON:0002028;3.56e-12;12!UBERON:0001905;2.21e-10;2!UBERON:0002757;2.21e-10;2!UBERON:0010134;2.21e-10;2!UBERON:0005408;2.21e-10;2!UBERON:0001899;2.21e-10;2!UBERON:0002133;5.30e-10;2!UBERON:0003127;8.62e-10;2!UBERON:0002148;1.22e-09;2!UBERON:0006331;1.22e-09;2!UBERON:0009662;1.22e-09;2!UBERON:0002368;2.90e-08;33!UBERON:0003978;6.27e-07;3!UBERON:0000946;6.27e-07;3 | |||
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| ||
|short_description=p1@CALCA | |||
}} | }} |
Latest revision as of 22:20, 16 September 2015
Short description: | p1@CALCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CALCA_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | 0bp_to_ENST00000331587_5end |
EntrezGene: | CALCA |
HGNC: | 1437 |
UniProt: | P01258 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brainstem | 7.43e-18 | 6 |
posterior neural tube | 4.15e-17 | 15 |
chordal neural plate | 4.15e-17 | 15 |
segmental subdivision of nervous system | 3.63e-15 | 13 |
medulla oblongata | 1.97e-13 | 3 |
myelencephalon | 1.97e-13 | 3 |
future myelencephalon | 1.97e-13 | 3 |
segmental subdivision of hindbrain | 2.57e-12 | 12 |
hindbrain | 2.57e-12 | 12 |
presumptive hindbrain | 2.57e-12 | 12 |
adult organism | 1.61e-10 | 114 |
pineal body | 2.21e-10 | 2 |
regional part of epithalamus | 2.21e-10 | 2 |
secretory circumventricular organ | 2.21e-10 | 2 |
circumventricular organ | 2.21e-10 | 2 |
epithalamus | 2.21e-10 | 2 |
atrioventricular valve | 4.96e-10 | 2 |
open tracheal system trachea | 8.82e-10 | 2 |
locus ceruleus | 8.82e-10 | 2 |
brainstem nucleus | 8.82e-10 | 2 |
hindbrain nucleus | 8.82e-10 | 2 |
endocrine gland | 7.99e-09 | 35 |
organ system subdivision | 1.67e-07 | 223 |
valve | 6.00e-07 | 3 |
cardiac mesenchyme | 6.00e-07 | 3 |
cardial valve | 6.00e-07 | 3 |
tunica intima | 6.00e-07 | 3 |
heart layer | 6.00e-07 | 3 |
endocardium | 6.00e-07 | 3 |
endocardial cushion | 6.00e-07 | 3 |
presumptive endocardium | 6.00e-07 | 3 |
pons | 8.76e-07 | 3 |
spinal cord | 9.83e-07 | 3 |
dorsal region element | 9.83e-07 | 3 |
dorsum | 9.83e-07 | 3 |