FFCP PHASE1:Hg19::chr11:13030878..13030889,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:13030878..13030889,+
|short_description=p2@RASSF10
|description=CAGE_peak_2_at_RASSF10_5end
|association_with_transcript=-80bp_to_NM_001080521_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=644943 | |EntrezGene=644943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=33984 | |HGNC=33984 | ||
|TSSclassifier=strong | |||
|UniProt=A6NK89 | |UniProt=A6NK89 | ||
|association_with_transcript=-80bp_to_NM_001080521_5end | |||
|cluster_id=chr11:13030878..13030889,+ | |||
|description=CAGE_peak_2_at_RASSF10_5end | |||
|id=chr11:13030878..13030889,+ | |||
|ontology_enrichment_celltype=CL:0002621!4.19e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002621;2.01e-59;3!CL:0000650;3.18e-11;2!CL:1000500;3.18e-11;2!CL:1000618;3.18e-11;2!CL:1001318;3.18e-11;2!CL:0002173;3.18e-11;2!CL:0002251;1.51e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.22e-59,3;CL:0000650,4.09e-11,2;CL:1000500,4.09e-11,2;CL:1000618,4.09e-11,2;CL:1001318,4.09e-11,2;CL:0002173,4.09e-11,2;CL:0002251,1.40e-09,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;2.02e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000922!1.41e-07!612;UBERON:0000153!3.93e-07!129;UBERON:0007811!3.93e-07!129;UBERON:0001949!4.19e-07!3;UBERON:0000166!6.88e-07!21;UBERON:0000033!9.80e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.01e-59;3!UBERON:0003929;5.53e-26;7!UBERON:0003350;7.74e-23;8!UBERON:0001828;7.74e-23;8!UBERON:0004913;1.87e-21;1!UBERON:0003703;1.87e-21;1!UBERON:0001174;1.87e-21;1!UBERON:0004914;1.87e-21;1!UBERON:0000486;1.78e-15;12!UBERON:0003729;2.43e-14;13!UBERON:0003567;3.18e-11;2!UBERON:0003838;3.18e-11;2!UBERON:0003586;3.18e-11;2!UBERON:0005169;3.18e-11;2!UBERON:0002321;3.18e-11;2!UBERON:0005215;3.18e-11;2!UBERON:0002303;3.18e-11;2!UBERON:0002319;3.18e-11;2!UBERON:0000161;5.10e-10;19!UBERON:0000166;5.10e-10;19!UBERON:0000344;1.51e-09;20!UBERON:0004807;9.81e-09;22!UBERON:0002114;4.84e-08;2!UBERON:0000165;5.52e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.22e-59,3;UBERON:0003350,6.43e-23,8;UBERON:0001828,6.43e-23,8;UBERON:0004913,1.88e-21,1;UBERON:0003703,1.88e-21,1;UBERON:0001174,1.88e-21,1;UBERON:0004914,1.88e-21,1;UBERON:0003729,2.17e-14,13;UBERON:0003567,4.09e-11,2;UBERON:0003838,4.09e-11,2;UBERON:0003586,4.09e-11,2;UBERON:0005169,4.09e-11,2;UBERON:0002321,4.09e-11,2;UBERON:0005215,4.09e-11,2;UBERON:0002303,4.09e-11,2;UBERON:0002319,4.09e-11,2;UBERON:0000344,1.40e-09,20;UBERON:0000166,9.18e-09,22;UBERON:0002114,4.84e-08,2;UBERON:0004807,5.25e-07,28;UBERON:0000165,8.77e-07,29;UBERON:0000930,8.77e-07,29 | |||
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| ||
|short_description=p2@RASSF10 | |||
}} | }} |
Latest revision as of 18:37, 16 September 2015
Short description: | p2@RASSF10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RASSF10_5end |
Coexpression cluster: | NA |
Association with transcript: | -80bp_to_NM_001080521_5end |
EntrezGene: | RASSF10 |
HGNC: | 33984 |
UniProt: | A6NK89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.22e-59 | 3 |
mesangial cell | 4.09e-11 | 2 |
kidney interstitial cell | 4.09e-11 | 2 |
juxtaglomerular complex cell | 4.09e-11 | 2 |
renal interstitial pericyte | 4.09e-11 | 2 |
extraglomerular mesangial cell | 4.09e-11 | 2 |
epithelial cell of alimentary canal | 1.40e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.22e-59 | 3 |
epithelium of mucosa | 6.43e-23 | 8 |
gingiva | 6.43e-23 | 8 |
hepatopancreatic ampulla | 1.88e-21 | 1 |
extrahepatic bile duct | 1.88e-21 | 1 |
common bile duct | 1.88e-21 | 1 |
duodenal papilla | 1.88e-21 | 1 |
mouth mucosa | 2.17e-14 | 13 |
abdomen connective tissue | 4.09e-11 | 2 |
abdominal segment connective tissue | 4.09e-11 | 2 |
trunk connective tissue | 4.09e-11 | 2 |
interstitial tissue | 4.09e-11 | 2 |
extraglomerular mesangium | 4.09e-11 | 2 |
kidney interstitium | 4.09e-11 | 2 |
juxtaglomerular apparatus | 4.09e-11 | 2 |
mesangium | 4.09e-11 | 2 |
mucosa | 1.40e-09 | 20 |
oral opening | 9.18e-09 | 22 |
duodenum | 4.84e-08 | 2 |
respiratory system epithelium | 5.25e-07 | 28 |
mouth | 8.77e-07 | 29 |
stomodeum | 8.77e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.02e-11 | 2 |