FFCP PHASE1:Hg19::chr14:23398566..23398614,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10419 | |EntrezGene=10419 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10894 | |HGNC=10894 | ||
|TSSclassifier=strong | |||
|UniProt=B4DX49,A8MZ91,C9JSX3,B4DV00,G3V2L6,G3V507,G3V3A3,G3V580,G3V2X6,G3V2F5 | |UniProt=B4DX49,A8MZ91,C9JSX3,B4DV00,G3V2L6,G3V507,G3V3A3,G3V580,G3V2X6,G3V2F5 | ||
|association_with_transcript=0bp_to_ENST00000216350,ENST00000397441,ENST00000421938,ENST00000538452,ENST00000553550,ENST00000553787,ENST00000553915,ENST00000554716,ENST00000554867,ENST00000556426,ENST00000556616,ENST00000557015,ENST00000557415_5end | |association_with_transcript=0bp_to_ENST00000216350,ENST00000397441,ENST00000421938,ENST00000538452,ENST00000553550,ENST00000553787,ENST00000553915,ENST00000554716,ENST00000554867,ENST00000556426,ENST00000556616,ENST00000557015,ENST00000557415_5end | ||
|cluster_id=chr14:23398566..23398614,- | |||
|description=CAGE_peak_1_at_PRMT5_5end | |description=CAGE_peak_1_at_PRMT5_5end | ||
|id=chr14:23398566..23398614,- | |id=chr14:23398566..23398614,- | ||
|ontology_enrichment_celltype=CL:0000066!4.59e-27!254;CL:0002321!2.59e-17!248;CL:0000220!9.63e-17!246;CL:0000548!1.59e-15!679;CL:0000004!1.59e-15!679;CL:0000255!1.59e-15!679;CL:0000012!4.67e-15!682;CL:0000055!5.38e-09!180;CL:0000076!3.40e-08!62;CL:0000221!4.67e-07!71 | |ontology_enrichment_celltype=CL:0000066!4.59e-27!254;CL:0002321!2.59e-17!248;CL:0000220!9.63e-17!246;CL:0000548!1.59e-15!679;CL:0000004!1.59e-15!679;CL:0000255!1.59e-15!679;CL:0000012!4.67e-15!682;CL:0000055!5.38e-09!180;CL:0000076!3.40e-08!62;CL:0000221!4.67e-07!71 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.84e-27,253;CL:0002321,2.27e-17,250;CL:0000076,5.74e-08,63;CL:0000221,7.05e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!9.57e-33!239;DOID:162!7.71e-32!235;DOID:0050687!5.81e-23!143;DOID:305!1.33e-19!106;DOID:0050686!2.22e-11!137;DOID:2531!1.97e-07!51;DOID:0060083!1.97e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,9.57e-33,239;DOID:162,7.71e-32,235;DOID:0050687,5.81e-23,143;DOID:305,1.33e-19,106;DOID:0050686,2.22e-11,137;DOID:2531,1.97e-07,51;DOID:0060083,1.97e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.43e-12!238;UBERON:0009142!1.43e-12!238;UBERON:0001048!7.15e-10!168;UBERON:0008947!7.60e-09!38;UBERON:0003258!7.60e-09!38;UBERON:0002100!1.06e-08!216;UBERON:0000072!1.20e-08!46;UBERON:0000490!1.40e-08!138;UBERON:0000481!2.07e-08!347;UBERON:0000119!2.23e-08!312;UBERON:0000483!4.46e-08!309;UBERON:0004119!6.86e-08!169;UBERON:0000925!6.86e-08!169;UBERON:0006595!6.86e-08!169;UBERON:0000077!1.32e-07!130;UBERON:0005256!5.52e-07!143;UBERON:0005157!5.97e-07!51;UBERON:0001007!7.60e-07!155;UBERON:0001555!7.60e-07!155;UBERON:0007026!7.60e-07!155 | |ontology_enrichment_uberon=UBERON:0003104!1.43e-12!238;UBERON:0009142!1.43e-12!238;UBERON:0001048!7.15e-10!168;UBERON:0008947!7.60e-09!38;UBERON:0003258!7.60e-09!38;UBERON:0002100!1.06e-08!216;UBERON:0000072!1.20e-08!46;UBERON:0000490!1.40e-08!138;UBERON:0000481!2.07e-08!347;UBERON:0000119!2.23e-08!312;UBERON:0000483!4.46e-08!309;UBERON:0004119!6.86e-08!169;UBERON:0000925!6.86e-08!169;UBERON:0006595!6.86e-08!169;UBERON:0000077!1.32e-07!130;UBERON:0005256!5.52e-07!143;UBERON:0005157!5.97e-07!51;UBERON:0001007!7.60e-07!155;UBERON:0001555!7.60e-07!155;UBERON:0007026!7.60e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0000072;1.11e-09;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,4.04e-10,199;UBERON:0000490,5.49e-10,148;UBERON:0001048,1.12e-09,160;UBERON:0008947,7.60e-09,38;UBERON:0003258,7.60e-09,38;UBERON:0000072,1.11e-08,47;UBERON:0004119,3.55e-08,160;UBERON:0000925,3.55e-08,160;UBERON:0006595,3.55e-08,160;UBERON:0000119,3.96e-08,309;UBERON:0000483,7.81e-08,306;UBERON:0003104,1.20e-07,160;UBERON:0009142,1.20e-07,160;UBERON:0005157,4.61e-07,47;UBERON:0001007,4.73e-07,145;UBERON:0001555,4.73e-07,145;UBERON:0007026,4.73e-07,145;UBERON:0000065,9.02e-07,54 | |||
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| ||
|short_description=p1@PRMT5 | |short_description=p1@PRMT5 | ||
}} | }} |
Latest revision as of 08:17, 19 September 2015
Short description: | p1@PRMT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRMT5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000216350, ENST00000397441, ENST00000421938, ENST00000538452, ENST00000553550, ENST00000553787, ENST00000553915, ENST00000554716, ENST00000554867, ENST00000556426, ENST00000556616, ENST00000557015, ENST00000557415_5end |
EntrezGene: | PRMT5 |
HGNC: | 10894 |
UniProt: | B4DX49A8MZ91C9JSX3B4DV00G3V2L6G3V507G3V3A3G3V580G3V2X6G3V2F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.84e-27 | 253 |
embryonic cell | 2.27e-17 | 250 |
squamous epithelial cell | 5.74e-08 | 63 |
ectodermal cell | 7.05e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
trunk | 4.04e-10 | 199 |
unilaminar epithelium | 5.49e-10 | 148 |
primordium | 1.12e-09 | 160 |
respiratory primordium | 7.60e-09 | 38 |
endoderm of foregut | 7.60e-09 | 38 |
segment of respiratory tract | 1.11e-08 | 47 |
endoderm-derived structure | 3.55e-08 | 160 |
endoderm | 3.55e-08 | 160 |
presumptive endoderm | 3.55e-08 | 160 |
cell layer | 3.96e-08 | 309 |
epithelium | 7.81e-08 | 306 |
mesenchyme | 1.20e-07 | 160 |
entire embryonic mesenchyme | 1.20e-07 | 160 |
epithelial fold | 4.61e-07 | 47 |
digestive system | 4.73e-07 | 145 |
digestive tract | 4.73e-07 | 145 |
primitive gut | 4.73e-07 | 145 |
respiratory tract | 9.02e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 9.57e-33 | 239 |
cancer | 7.71e-32 | 235 |
cell type cancer | 5.81e-23 | 143 |
carcinoma | 1.33e-19 | 106 |
organ system cancer | 2.22e-11 | 137 |
hematologic cancer | 1.97e-07 | 51 |
immune system cancer | 1.97e-07 | 51 |