FFCP PHASE1:Hg19::chr11:1263439..1263454,-: Difference between revisions
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|id=chr11:1263439..1263454,-
|short_description=p@chr11:1263439..1263454,-
|description=CAGE_peak_at_chr11:1263439..1263454,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:1263439..1263454,- | |||
|coexpression_cluster_id=C251 | |||
|description=CAGE_peak_at_chr11:1263439..1263454,- | |||
|id=chr11:1263439..1263454,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;8.10e-41;1!UBERON:0008814;5.69e-21;2!UBERON:0010056;5.69e-21;2!UBERON:0006595;9.86e-09;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!5.30e-15!3;UBERON:0001033!5.30e-15!3;UBERON:0010056!5.30e-15!3;UBERON:0002372!2.93e-12!1;UBERON:0001961!2.93e-12!1;UBERON:0001744!2.93e-12!1;UBERON:0001735!2.93e-12!1;UBERON:0001736!6.97e-12!1;UBERON:0006298!6.97e-12!1;UBERON:0001042!3.63e-10!10;UBERON:0009145!3.63e-10!10;UBERON:0000078!1.14e-09!18;UBERON:0006562!2.74e-09!11;UBERON:0000166!2.59e-08!21;UBERON:0000161!1.84e-07!35;UBERON:0002294!4.46e-07!7;UBERON:0001173!4.46e-07!7;UBERON:0004912!4.46e-07!7;UBERON:0004921!9.63e-07!129;UBERON:0004185!9.63e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;8.10e-41;1!UBERON:0001961;8.10e-41;1!UBERON:0001744;8.10e-41;1!UBERON:0001042;8.10e-41;1!UBERON:0001735;8.10e-41;1!UBERON:0006562;3.44e-21;2!UBERON:0003127;5.69e-21;2!UBERON:0002110;1.31e-14;3!UBERON:0001723;1.83e-14;3!UBERON:0001033;1.83e-14;3!UBERON:0002294;5.22e-07;7!UBERON:0001173;5.22e-07;7!UBERON:0003126;6.04e-07;7!UBERON:0001005;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,9.91e-41,1;UBERON:0001961,9.91e-41,1;UBERON:0001744,9.91e-41,1;UBERON:0001735,9.91e-41,1;UBERON:0003127,5.70e-21,2;UBERON:0001042,8.13e-17,10;UBERON:0009145,8.13e-17,10;UBERON:0006562,2.17e-15,11;UBERON:0002110,1.22e-14,3;UBERON:0006242,1.22e-14,3;UBERON:0001723,2.09e-14,3;UBERON:0001033,2.09e-14,3;UBERON:0010056,2.09e-14,3;UBERON:0001557,2.36e-09,19;UBERON:0007023,2.58e-09,114;UBERON:0000072,2.27e-08,47;UBERON:0000166,3.27e-08,22;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0000065,2.22e-07,54;UBERON:0003126,6.04e-07,7;UBERON:0001005,6.04e-07,7;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p@chr11:1263439..1263454,- | |||
}} | }} |
Latest revision as of 19:45, 23 July 2015
Short description: | p@chr11:1263439..1263454, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1263439..1263454, - |
Coexpression cluster: | C251_gall_tonsil_trachea_CD14_salivary_throat_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 9.91e-41 | 1 |
mucosa-associated lymphoid tissue | 9.91e-41 | 1 |
lymphoid tissue | 9.91e-41 | 1 |
tonsillar ring | 9.91e-41 | 1 |
open tracheal system trachea | 5.70e-21 | 2 |
chordate pharynx | 8.13e-17 | 10 |
pharyngeal region of foregut | 8.13e-17 | 10 |
pharynx | 2.17e-15 | 11 |
gallbladder | 1.22e-14 | 3 |
gall bladder primordium | 1.22e-14 | 3 |
tongue | 2.09e-14 | 3 |
gustatory system | 2.09e-14 | 3 |
future tongue | 2.09e-14 | 3 |
upper respiratory tract | 2.36e-09 | 19 |
adult organism | 2.58e-09 | 114 |
segment of respiratory tract | 2.27e-08 | 47 |
oral opening | 3.27e-08 | 22 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
respiratory tract | 2.22e-07 | 54 |
trachea | 6.04e-07 | 7 |
respiratory airway | 6.04e-07 | 7 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |