FFCP PHASE1:Hg19::chr11:126275477..126275530,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:126275477..126275530,+
|short_description=p4@ST3GAL4
|description=CAGE_peak_4_at_ST3GAL4_5end
|association_with_transcript=0bp_to_ENST00000526756_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6484 | |EntrezGene=6484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10864 | |HGNC=10864 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000526756_5end | |||
|cluster_id=chr11:126275477..126275530,+ | |||
|description=CAGE_peak_4_at_ST3GAL4_5end | |||
|id=chr11:126275477..126275530,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.74e-14!254;CL:0002251!3.76e-09!21;CL:0002076!1.40e-07!43;CL:0002541!1.49e-07!3;CL:0000039!2.60e-07!7;CL:0000586!2.60e-07!7;CL:0000349!9.48e-07!3;CL:0002577!9.48e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.25e-13;3!CL:0000349;6.43e-10;19!CL:0002537;2.14e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.54e-13,3;CL:0000349,5.40e-10,19;CL:0002537,2.09e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.66e-21!106;DOID:0050687!1.21e-17!143;DOID:1749!4.33e-12!14;DOID:299!1.27e-10!25;DOID:162!8.66e-09!235;DOID:14566!2.36e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.80e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.86e-12,106;DOID:0050687,9.37e-11,143;DOID:1749,8.84e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!6.72e-20!14;UBERON:0000158!6.72e-20!14;UBERON:0003124!9.84e-15!7;UBERON:0004119!1.54e-14!169;UBERON:0000925!1.54e-14!169;UBERON:0006595!1.54e-14!169;UBERON:0000478!3.09e-12!24;UBERON:0000077!1.26e-11!130;UBERON:0001007!4.77e-10!155;UBERON:0001555!4.77e-10!155;UBERON:0007026!4.77e-10!155;UBERON:0000344!1.36e-09!12;UBERON:0004923!2.48e-09!57;UBERON:0004921!6.31e-09!129;UBERON:0004185!6.31e-09!129;UBERON:0001987!7.38e-09!4;UBERON:0004340!7.38e-09!4;UBERON:0001004!3.31e-08!72;UBERON:0000161!9.71e-08!35;UBERON:0000476!1.49e-07!3;UBERON:0000920!1.49e-07!3;UBERON:0000305!1.67e-07!7;UBERON:0002294!1.94e-07!7;UBERON:0001173!1.94e-07!7;UBERON:0004912!1.94e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;7.62e-15;10!UBERON:0000158;7.62e-15;10!UBERON:0003124;3.25e-13;3!UBERON:0000920;3.25e-13;3!UBERON:0000478;1.19e-12;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.79e-18,14;UBERON:0000158,2.79e-18,14;UBERON:0003124,6.04e-15,7;UBERON:0000920,2.54e-13,3;UBERON:0000478,1.02e-12,24;UBERON:0004119,7.32e-07,160;UBERON:0000925,7.32e-07,160;UBERON:0006595,7.32e-07,160 | |||
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| ||
|short_description=p4@ST3GAL4 | |||
}} | }} |
Latest revision as of 14:23, 16 September 2015
Short description: | p4@ST3GAL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ST3GAL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526756_5end |
EntrezGene: | ST3GAL4 |
HGNC: | 10864 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.54e-13 | 3 |
extraembryonic cell | 5.40e-10 | 19 |
amnion mesenchymal stem cell | 2.09e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.79e-18 | 14 |
membranous layer | 2.79e-18 | 14 |
chorion | 6.04e-15 | 7 |
egg chorion | 2.54e-13 | 3 |
extraembryonic structure | 1.02e-12 | 24 |
endoderm-derived structure | 7.32e-07 | 160 |
endoderm | 7.32e-07 | 160 |
presumptive endoderm | 7.32e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.86e-12 | 106 |
cell type cancer | 9.37e-11 | 143 |
squamous cell carcinoma | 8.84e-07 | 14 |