FFCP PHASE1:Hg19::chr11:122526392..122526406,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:122526392..122526406,+
|short_description=p3@UBASH3B
|description=CAGE_peak_3_at_UBASH3B_5end
|association_with_transcript=0bp_to_NM_032873,uc001pyi.3_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84959 | |EntrezGene=84959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29884 | |HGNC=29884 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TF42 | |UniProt=Q8TF42 | ||
|association_with_transcript=0bp_to_NM_032873,uc001pyi.3_5end | |||
|cluster_id=chr11:122526392..122526406,+ | |||
|description=CAGE_peak_3_at_UBASH3B_5end | |||
|id=chr11:122526392..122526406,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.01e-18!172;CL:0000566!4.01e-18!172;CL:0000988!7.85e-16!182;CL:0002032!9.64e-16!165;CL:0000837!9.64e-16!165;CL:0000738!1.51e-14!140;CL:0002087!2.46e-13!119;CL:0002031!1.38e-12!124;CL:0000763!7.73e-10!112;CL:0000049!7.73e-10!112;CL:0000766!3.41e-08!76;CL:0000791!5.68e-08!18;CL:0000789!5.68e-08!18;CL:0002420!5.68e-08!18;CL:0002419!5.68e-08!18;CL:0000790!5.68e-08!18;CL:0000839!4.24e-07!70;CL:0000084!4.41e-07!25;CL:0000827!4.41e-07!25;CL:0000838!9.54e-07!52;CL:0002194!9.60e-07!63;CL:0000576!9.60e-07!63;CL:0000040!9.60e-07!63;CL:0000559!9.60e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.37e-10;25!CL:0000624;3.28e-10;6!CL:0000791;1.39e-09;18!CL:0000789;1.39e-09;18!CL:0002419;1.39e-09;18!CL:0000763;8.72e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.45e-25,168;CL:0000988,2.35e-23,177;CL:0002032,6.53e-22,161;CL:0000837,6.53e-22,161;CL:0000738,6.58e-19,136;CL:0002087,1.53e-16,115;CL:0000763,1.06e-14,108;CL:0000049,1.06e-14,108;CL:0002031,1.31e-13,120;CL:0000084,5.71e-11,25;CL:0000827,5.71e-11,25;CL:0000624,6.82e-11,6;CL:0000766,8.36e-11,72;CL:0000791,2.47e-10,18;CL:0000789,2.47e-10,18;CL:0002420,2.47e-10,18;CL:0002419,2.47e-10,18;CL:0000790,2.47e-10,18;CL:0002194,6.40e-08,59;CL:0000576,6.40e-08,59;CL:0000040,6.40e-08,59;CL:0000559,6.40e-08,59;CL:0000473,6.69e-08,48;CL:0000234,6.69e-08,48;CL:0002009,1.71e-07,61;CL:0000838,1.87e-07,52;CL:0000839,1.88e-07,66;CL:0000557,2.92e-07,67;CL:0000542,3.16e-07,53;CL:0000051,3.16e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.39e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.36e-09,39;DOID:2531,4.69e-07,51;DOID:0060083,4.69e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.34e-08!102;UBERON:0003061!2.34e-08!102;UBERON:0002193!4.97e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.27e-12,98;UBERON:0003061,1.27e-12,98;UBERON:0002193,1.63e-11,108;UBERON:0002370,1.64e-08,4;UBERON:0005058,1.64e-08,4;UBERON:0009113,1.64e-08,4;UBERON:0003295,1.64e-08,4;UBERON:0005562,1.64e-08,4;UBERON:0002405,1.69e-08,93;UBERON:0004177,8.41e-07,7;UBERON:0005057,8.41e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.655324116390517,0.263766978228454,0.37129905888014,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0.125542639594803,0.229240217243854,0.328402357799783,0.629686250509434,1.18009283054671,1.15148819429164,1.23852898652861,0,0,0,0.92960640696362,0.426507697462265,1.17440175733939,0,0.802177789880567,1.30206522429511,0.447830948479849,0.32389366601898,1.28787783817093,1.01778767145695,0.377875943688809,0.727752183563449,0.929716147622738,0,0,0.28769239232215,1.2808035326455,0.709446689665756,1.03423704220986,0.645484683583826,0,0.941211697713023,0.272906150057846,0.449446968890169,0,0,1.27867425159808,0,1.39624560335142,0.426224750532694,0.870627715885752,1.13477044938228,0,1.00499466102697,0,0.65156653411535,0,0,0,0.422510572623884,1.27562579979026,0.838634582033504,1.12328631146495,1.50176892841506,1.12507910687956,3.13514018115373,1.59133341759272,1.64397738388171,0,1.09227722252426,0,0.426730222566507,0.400395987036012,0,1.32208974556972,0,0.569212969109448,0,0.382273228125229,0,0,1.05353633910031,1.7703879310245,1.57204305099666,1.23360899399706,3.17654341242288,1.30368906653436,1.89379122293893,0,2.22820913770347,2.06224135232386,1.10766947291811,1.62482318259009,4.86747014957566,4.1618991219161,1.80881695064044,2.21080014228679,1.44901542867526,1.63115219478266,1.60524496853828,4.18142095219907,2.83273356743915,1.91610246800961,1.37450978193052,1.26509846009751,1.91139248594458,1.30216690771284,1.90090408889675,0.301150238155546,0.127986611154418,0,0.710331756132051,0.821127996921047,0.80642697289893,0.802320587350522,1.30341963494519,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0.263504357079378,0.327447688744282,0,0,1.29818957461873,1.56716763569341,0.797747763113191,0,1.71598473234038,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.488124115096339,0,0,0.0892997282840798,0.673588117878509,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0.468642863667593,0,0,0,0.23486899728753,0.161872944368132,0,0.61246251376468,0.368502951935304,0.516628905878827,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0.831192346452549,0.877955241761676,0.30648779579902,0.300476117813194,0.453728732640084,0,0.213557388818567,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0,0.243947412259191,0.132529768321485,0.929551542956147,0.207322110030741,0,1.09493207722749,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.330881918197182,0,0,0.134831308160164,0,0,1.4763109092493,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.702012795417713,1.18904929830983,0,0,0,0.0895585227028483,0,0,0.985326475791887,2.3773077183571,0.414656231081544,0,0,0.253991577168676,1.52795370223311,0,0,0.205654985406647,0.300343057843917,1.14330573052231,0.224262168690721,0,0.2933531432838,0.258543431515556,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0.871533458600294,0.099972991182057,4.86495122564762,2.00902836572851,0,0,0,0,0.144781306667579,0.205476322550383,0,2.12961773587702,0.985153801009636,1.50939302401662,0.641715181398742,0,1.30139853857622,0,0.335032530668698,1.27587750330633,2.24702107184155,2.99161459204025,0.414415513436035,0,0,0.542530047399471,0.207970861530807,0.535286966391485,0,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0,0.343143423810856,1.03384013061444,1.72571360654893,1.38745825144478,0,0,0.604780586659361,0,0,0,0,0,0.160853921143607,0,0,0,0.328508624055237,0,0.232420756919918,0.483437798366489,0.40101294060657,0.276242966807689,0.114814448164607,0,0.262248829918848,0,0.231046011313244,0,0,0.527758144464379,0,0,0,0,0,0,0.254876273045038,0,0,0.438519753291869,0.261435451024901,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.170453254832202,0,0.165284915360978,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0.37064843820784,0,0.372158369359667,0,0.38126038784765,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0.404364963146632,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0.430234056612155,0.491245205065606,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0.764637207142375,1.13929437434833,1.19115887728894,2.05681136543097,0.648473311192717,0,1.58625035258854,0.320472213382419,0.962479855263359,0.245040215981032,0,1.44269212976445,2.13425530045242,1.11598390910176,1.1974762285969,2.2980644415884,2.11673582723883,1.29848776109822,0,0,0.94007937463814,0,1.18504244461122,1.76646882614069,1.61439765752838,2.98092366383228,0.343505344755765,0.307240764308458,0.894704431569664,0.667396566847634,0.19538809540204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| ||
|short_description=p3@UBASH3B | |||
}} | }} |
Latest revision as of 08:21, 16 September 2015
Short description: | p3@UBASH3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UBASH3B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_032873, uc001pyi.3_5end |
EntrezGene: | UBASH3B |
HGNC: | 29884 |
UniProt: | Q8TF42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.45e-25 | 168 |
hematopoietic cell | 2.35e-23 | 177 |
hematopoietic oligopotent progenitor cell | 6.53e-22 | 161 |
hematopoietic multipotent progenitor cell | 6.53e-22 | 161 |
leukocyte | 6.58e-19 | 136 |
nongranular leukocyte | 1.53e-16 | 115 |
myeloid cell | 1.06e-14 | 108 |
common myeloid progenitor | 1.06e-14 | 108 |
hematopoietic lineage restricted progenitor cell | 1.31e-13 | 120 |
T cell | 5.71e-11 | 25 |
pro-T cell | 5.71e-11 | 25 |
CD4-positive, alpha-beta T cell | 6.82e-11 | 6 |
myeloid leukocyte | 8.36e-11 | 72 |
mature alpha-beta T cell | 2.47e-10 | 18 |
alpha-beta T cell | 2.47e-10 | 18 |
immature T cell | 2.47e-10 | 18 |
mature T cell | 2.47e-10 | 18 |
immature alpha-beta T cell | 2.47e-10 | 18 |
monopoietic cell | 6.40e-08 | 59 |
monocyte | 6.40e-08 | 59 |
monoblast | 6.40e-08 | 59 |
promonocyte | 6.40e-08 | 59 |
defensive cell | 6.69e-08 | 48 |
phagocyte | 6.69e-08 | 48 |
macrophage dendritic cell progenitor | 1.71e-07 | 61 |
lymphoid lineage restricted progenitor cell | 1.87e-07 | 52 |
myeloid lineage restricted progenitor cell | 1.88e-07 | 66 |
granulocyte monocyte progenitor cell | 2.92e-07 | 67 |
lymphocyte | 3.16e-07 | 53 |
common lymphoid progenitor | 3.16e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.27e-12 | 98 |
blood island | 1.27e-12 | 98 |
hemolymphoid system | 1.63e-11 | 108 |
thymus | 1.64e-08 | 4 |
hemolymphoid system gland | 1.64e-08 | 4 |
thymic region | 1.64e-08 | 4 |
pharyngeal gland | 1.64e-08 | 4 |
thymus primordium | 1.64e-08 | 4 |
immune system | 1.69e-08 | 93 |
hemopoietic organ | 8.41e-07 | 7 |
immune organ | 8.41e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.36e-09 | 39 |
hematologic cancer | 4.69e-07 | 51 |
immune system cancer | 4.69e-07 | 51 |