FFCP PHASE1:Hg19::chr11:121322799..121322818,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:121322799..121322818,+
|short_description=p3@SORL1
|description=CAGE_peak_3_at_SORL1_5end
|association_with_transcript=-93bp_to_ENST00000260197,NM_003105_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6653 | |EntrezGene=6653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11185 | |HGNC=11185 | ||
|TSSclassifier=strong | |||
|UniProt=Q92673 | |UniProt=Q92673 | ||
|association_with_transcript=-93bp_to_ENST00000260197,NM_003105_5end | |||
|cluster_id=chr11:121322799..121322818,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_SORL1_5end | |||
|id=chr11:121322799..121322818,+ | |||
|ontology_enrichment_celltype=CL:0002087!3.59e-39!119;CL:0000738!4.45e-39!140;CL:0002031!6.54e-33!124;CL:0002057!2.84e-32!42;CL:0000037!3.93e-32!172;CL:0000566!3.93e-32!172;CL:0002032!2.91e-31!165;CL:0000837!2.91e-31!165;CL:0000860!9.85e-29!45;CL:0000766!2.49e-28!76;CL:0000988!5.79e-28!182;CL:0002194!9.03e-25!63;CL:0000576!9.03e-25!63;CL:0000040!9.03e-25!63;CL:0000559!9.03e-25!63;CL:0002009!2.51e-23!65;CL:0000557!2.00e-21!71;CL:0000839!8.86e-21!70;CL:0000763!3.90e-18!112;CL:0000049!3.90e-18!112;CL:0000838!5.98e-13!52;CL:0000542!1.95e-12!53;CL:0000051!1.95e-12!53;CL:0000094!1.39e-08!8;CL:0000945!4.42e-08!24;CL:0000826!4.42e-08!24;CL:0002393!3.35e-07!9;CL:0002397!3.35e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.42e-34;33!CL:0002057;1.42e-34;33!CL:0000576;3.08e-27;48!CL:0000473;1.36e-24;39!CL:0000234;1.36e-24;39!CL:0000766;2.35e-19;69!CL:0002087;4.91e-15;104!CL:0000094;8.03e-12;8!CL:0000738;1.23e-10;136!CL:0000763;4.06e-09;100!CL:0000988;3.17e-08;177!CL:0000081;5.85e-08;11!CL:0002393;1.40e-07;6!CL:0002397;1.40e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.58e-47,136;CL:0000860,1.37e-46,42;CL:0002057,1.37e-46,42;CL:0002087,2.90e-46,115;CL:0000473,1.10e-40,48;CL:0000234,1.10e-40,48;CL:0000766,2.87e-40,72;CL:0002031,8.90e-39,120;CL:0000037,2.35e-38,168;CL:0002032,1.85e-37,161;CL:0000837,1.85e-37,161;CL:0002194,5.94e-35,59;CL:0000576,5.94e-35,59;CL:0000040,5.94e-35,59;CL:0000559,5.94e-35,59;CL:0000988,6.85e-35,177;CL:0002009,2.86e-33,61;CL:0000557,1.76e-30,67;CL:0000839,1.60e-29,66;CL:0000763,1.12e-25,108;CL:0000049,1.12e-25,108;CL:0000094,7.81e-12,8;CL:0000838,4.77e-11,52;CL:0000542,1.11e-10,53;CL:0000051,1.11e-10,53;CL:0002393,8.07e-10,9;CL:0002397,8.07e-10,9;CL:0000081,5.73e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-33;42!CL:0000049;1.91e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.98e-37!115;UBERON:0002390!2.13e-25!102;UBERON:0003061!2.13e-25!102;UBERON:0002193!1.57e-22!112;UBERON:0001049!9.35e-18!57;UBERON:0005068!9.35e-18!57;UBERON:0006241!9.35e-18!57;UBERON:0007135!9.35e-18!57;UBERON:0002371!2.17e-17!80;UBERON:0001474!9.93e-15!86;UBERON:0002780!1.36e-13!41;UBERON:0001890!1.36e-13!41;UBERON:0006240!1.36e-13!41;UBERON:0002405!2.41e-13!115;UBERON:0002616!2.96e-13!59;UBERON:0003080!5.65e-13!42;UBERON:0001017!3.68e-12!82;UBERON:0005743!2.11e-11!86;UBERON:0001893!2.29e-11!34;UBERON:0002020!3.49e-11!34;UBERON:0003528!3.49e-11!34;UBERON:0000955!6.08e-11!69;UBERON:0006238!6.08e-11!69;UBERON:0002791!8.84e-11!33;UBERON:0004765!2.14e-10!101;UBERON:0001434!2.14e-10!101;UBERON:0001869!5.49e-10!32;UBERON:0000073!2.18e-09!94;UBERON:0001016!2.18e-09!94;UBERON:0003075!3.18e-09!86;UBERON:0007284!3.18e-09!86;UBERON:0000178!2.86e-08!15;UBERON:0000179!2.86e-08!15;UBERON:0000463!2.86e-08!15;UBERON:0002619!3.64e-08!22;UBERON:0002346!3.86e-08!90;UBERON:0001950!4.19e-07!20;UBERON:0002308!6.09e-07!9;UBERON:0000125!6.09e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.78e-12;15!UBERON:0000179;2.78e-12;15!UBERON:0000463;2.78e-12;15!UBERON:0000073;1.38e-11;53!UBERON:0002616;1.38e-11;53!UBERON:0002780;6.72e-11;41!UBERON:0001890;6.72e-11;41!UBERON:0001893;5.58e-10;34!UBERON:0003528;1.94e-09;34!UBERON:0002020;1.94e-09;34!UBERON:0002791;6.08e-09;32!UBERON:0001869;7.78e-09;32!UBERON:0000125;7.57e-08;9!UBERON:0002308;7.57e-08;9!UBERON:0002619;8.75e-08;22!UBERON:0002298;1.84e-07;6!UBERON:0004732;4.09e-07;13!UBERON:0007023;4.14e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.38e-36,98;UBERON:0003061,9.38e-36,98;UBERON:0002193,4.87e-33,108;UBERON:0007023,4.05e-25,114;UBERON:0002371,6.10e-25,76;UBERON:0002405,4.20e-23,93;UBERON:0001049,5.14e-22,56;UBERON:0005068,5.14e-22,56;UBERON:0006241,5.14e-22,56;UBERON:0007135,5.14e-22,56;UBERON:0001474,5.96e-22,82;UBERON:0000073,1.87e-19,53;UBERON:0002616,1.87e-19,53;UBERON:0004765,1.28e-18,90;UBERON:0001434,3.62e-16,100;UBERON:0002780,1.50e-14,41;UBERON:0001890,1.50e-14,41;UBERON:0003080,1.50e-14,41;UBERON:0006240,1.50e-14,41;UBERON:0000955,2.41e-14,68;UBERON:0006238,2.41e-14,68;UBERON:0001017,5.58e-13,81;UBERON:0000178,3.06e-12,15;UBERON:0000179,3.06e-12,15;UBERON:0000463,3.06e-12,15;UBERON:0001893,4.10e-12,34;UBERON:0003075,4.12e-12,82;UBERON:0007284,4.12e-12,82;UBERON:0003528,6.96e-12,34;UBERON:0002020,6.96e-12,34;UBERON:0001016,2.59e-11,89;UBERON:0002346,5.06e-11,86;UBERON:0002791,2.07e-10,32;UBERON:0001869,2.69e-10,32;UBERON:0003076,6.30e-09,15;UBERON:0003057,6.30e-09,15;UBERON:0003081,2.89e-08,203;UBERON:0003056,5.03e-08,61;UBERON:0002619,6.17e-08,22;UBERON:0000125,7.70e-08,9;UBERON:0002308,7.70e-08,9;UBERON:0002298,2.11e-07,6;UBERON:0010371,2.70e-07,104;UBERON:0004732,4.65e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,1.55991119954897,1.81034797021462,10.2274711980715,5.37361157336098,6.65709330259127,0,0,0,1.62681121218633,0.710846162437108,0.880801318004542,6.09394949385065,4.01088894940283,6.07630438004385,1.11957737119962,0.647787332037959,0.77272670290256,21.2281428618164,8.69114670484262,18.436388650274,6.50801303335917,2.46700732813095,3.71647645074124,4.02769349251011,5.37937483711111,5.20260905754887,7.23965929546899,4.51839278508678,2.70852973188684,8.84738995850242,3.547779950752,4.71919317334678,7.03992952453076,5.1348644332175,8.31138263538754,9.89553900560148,9.3747919082167,8.09827026012119,5.22376629531451,6.80862269629368,3.11411124497787,6.02996796616184,5.21482918420201,5.86409880703815,6.05399502633369,4.78760926783834,3.79754864929061,2.74631872205524,3.4016687994407,4.40283155567589,9.32327638515909,7.50884464207532,9.64353520182481,2.56511469367124,1.39241674039363,3.47061892152804,0,4.36910889009705,0,2.56038133539904,1.60158394814405,3.4485146397269,3.96626923670917,1.90810750907073,1.70763890732835,1.17447437874188,0.764546456250458,1.32171328579026,0.560508562981536,1.84368859342554,1.57367816091066,1.17903228824749,2.2616164889946,1.5046784585161,0.651844533267181,0.946895611469467,0,1.11410456885174,1.17842362989935,1.77227115666897,1.08321545506006,0.512365278902701,0.650296737799391,0.822189523018381,1.38175008892924,2.02862160014537,2.96573126324121,1.60524496853828,2.09071047609954,1.0197840842781,1.91610246800961,0.34362744548263,1.51811815211702,1.59282707162048,0.651083453856419,0,1.20460095262218,0.255973222308837,2.49861453104692,6.39298580518846,1.64225599384209,1.20964045934839,1.60464117470104,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.44076983047484,0,0,0,0,0.132957960518865,1.43094374583205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,172.632346841243,221.034750564545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.594524649154913,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00902836572851,0,0,0,0,0,0,0,0,1.77327684181734,1.2937654491571,1.92514554419623,0,0,0,0.502548796003046,0,217.212036944683,209.413021442817,285.117873243992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,6.47142602455851,4.37582986994122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,3.40035338437484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7301702225266,0,0,0,0,36.5362278647162,35.1733115285493,101.966846504175,52.4109906007136,59.236167324412,40.2053452939485,36.7221377321918,91.2093952738411,0,0,0,0,1.58696134274089,0,0.159426272728822,0,1.91505370132367,0,0.973865820823666,0,0,2.35019843659535,0,0,0.321176150207399,1.00899853595524,0.851692475380653,0.343505344755765,1.22896305723383,1.3420566473545,0.667396566847634,2.34465714482448,0,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0,0,0.296964680832639,0,0,2.95405774462077,0,0,0,0.796991953004279,2.21027132424918,0,0.20453736500431,0.984678443688556,0,0.0898683511473268,0,0,0.493217028184668,35.922463852041,0,5.81599647657131,1.57705766875147,0,0,0.174919999992391,0,0.227586896570999,0.254253650292766,0,0,0,0,2.65722415744152,2.77371808838438,1.52581736317083,1.21637185924347,1.47773809476774,0.438770794307945,0,0.278847488557207,0.538651809526579,0.113942055847001,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0.995261931078505,0.707660516026713,2.4441205797345,0,0,0,10.2449722130629,0.802577647298789,4.2167600230561,0.91227394607833,0.782658475728359,0,0.789168805698781,0,0.91821828489147,0.947798694427319,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0.698906672968121,0.171986032471617,0,0,0,0.581934098930517,0,0.225980740780532,0,0,2.21587785845575,0,0,0.426905989478705,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,2.40168115483916,6.70836356570766,5.10986352267889,0,1.31443677139657,0.279282401272254,0.229160424011684,0,1.39775300349294,0.429226048136571,1.56220020209311,0.470284307407084,0,0,0,0,0.0674035438541849,0,0.508039992394707,1.59045937961861,5.72054305668618,0.160753148465019,0.412618309791701,0.415440338029185,0,0,3.64497339948148,0.335434687599266,0.236417121897595,0.524545881349981,0.422401346077626,0,0,0,1.98627591109629,0,0,0,0,0,0,0,0,0.879313402068495,1.32506888912221,2.19781025814636,5.15707146796491,0,0,4.59185874041087,0.471612915298998,4.14239055347196,11.4118185016749,0,1.82688897571344,0,0,0,0,0,0.942324577501406,0.886068179966986,1.83039397352945,3.129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| ||
|short_description=p3@SORL1 | |||
}} | }} |
Latest revision as of 06:40, 16 September 2015
Short description: | p3@SORL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SORL1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -93bp_to_ENST00000260197, NM_003105_5end |
EntrezGene: | SORL1 |
HGNC: | 11185 |
UniProt: | Q92673 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.58e-47 | 136 |
classical monocyte | 1.37e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.37e-46 | 42 |
nongranular leukocyte | 2.90e-46 | 115 |
defensive cell | 1.10e-40 | 48 |
phagocyte | 1.10e-40 | 48 |
myeloid leukocyte | 2.87e-40 | 72 |
hematopoietic lineage restricted progenitor cell | 8.90e-39 | 120 |
hematopoietic stem cell | 2.35e-38 | 168 |
hematopoietic oligopotent progenitor cell | 1.85e-37 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-37 | 161 |
monopoietic cell | 5.94e-35 | 59 |
monocyte | 5.94e-35 | 59 |
monoblast | 5.94e-35 | 59 |
promonocyte | 5.94e-35 | 59 |
hematopoietic cell | 6.85e-35 | 177 |
macrophage dendritic cell progenitor | 2.86e-33 | 61 |
granulocyte monocyte progenitor cell | 1.76e-30 | 67 |
myeloid lineage restricted progenitor cell | 1.60e-29 | 66 |
myeloid cell | 1.12e-25 | 108 |
common myeloid progenitor | 1.12e-25 | 108 |
granulocyte | 7.81e-12 | 8 |
lymphoid lineage restricted progenitor cell | 4.77e-11 | 52 |
lymphocyte | 1.11e-10 | 53 |
common lymphoid progenitor | 1.11e-10 | 53 |
intermediate monocyte | 8.07e-10 | 9 |
CD14-positive, CD16-positive monocyte | 8.07e-10 | 9 |
blood cell | 5.73e-08 | 11 |