FFCP PHASE1:Hg19::chr13:72358093..72358097,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:72358093..72358097,- | |||
|coexpression_cluster_id=C1187 | |||
|description=CAGE_peak_at_chr13:72358093..72358097,- | |description=CAGE_peak_at_chr13:72358093..72358097,- | ||
|id=chr13:72358093..72358097,- | |id=chr13:72358093..72358097,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;8.48e-25;2!CL:0000242;8.48e-25;2!CL:0000312;1.65e-10;5!CL:0000240;6.64e-09;6!CL:0000311;6.64e-09;6!CL:0000079;6.64e-09;6!CL:0000237;6.64e-09;6!CL:0002319;2.93e-07;25!CL:0000047;4.42e-07;2!CL:0002253;4.42e-07;2!CL:0002535;4.42e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,9.02e-25,2;CL:0000312,1.69e-10,5;CL:0000240,6.77e-09,6;CL:0000311,6.77e-09,6;CL:0000079,6.77e-09,6;CL:0000237,6.77e-09,6;CL:0000036,6.77e-09,6;CL:0000357,6.77e-09,6;CL:0000114,6.77e-09,6;CL:0002319,3.08e-07,25;CL:0002535,3.70e-07,2;CL:0002253,5.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.13e-16;3!UBERON:0005425;6.82e-13;1!CL:0000357;6.64e-09;6!CL:0000114;6.64e-09;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;5.68e-21;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,6.72e-21,14;DOID:0050687,6.52e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.37e-08!94;UBERON:0001016!2.37e-08!94;UBERON:0001049!4.75e-08!57;UBERON:0005068!4.75e-08!57;UBERON:0006241!4.75e-08!57;UBERON:0007135!4.75e-08!57;UBERON:0002616!1.27e-07!59;UBERON:0002020!1.29e-07!34;UBERON:0003528!1.29e-07!34;UBERON:0000955!1.91e-07!69;UBERON:0006238!1.91e-07!69;UBERON:0003075!2.75e-07!86;UBERON:0007284!2.75e-07!86;UBERON:0005743!3.66e-07!86;UBERON:0001017!5.86e-07!82;UBERON:0003056!6.86e-07!61;UBERON:0003080!8.08e-07!42 | |ontology_enrichment_uberon=UBERON:0000073!2.37e-08!94;UBERON:0001016!2.37e-08!94;UBERON:0001049!4.75e-08!57;UBERON:0005068!4.75e-08!57;UBERON:0006241!4.75e-08!57;UBERON:0007135!4.75e-08!57;UBERON:0002616!1.27e-07!59;UBERON:0002020!1.29e-07!34;UBERON:0003528!1.29e-07!34;UBERON:0000955!1.91e-07!69;UBERON:0006238!1.91e-07!69;UBERON:0003075!2.75e-07!86;UBERON:0007284!2.75e-07!86;UBERON:0005743!3.66e-07!86;UBERON:0001017!5.86e-07!82;UBERON:0003056!6.86e-07!61;UBERON:0003080!8.08e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.82e-13;1!UBERON:0001785;6.82e-13;1!UBERON:0002464;6.82e-13;1!UBERON:0004904;6.82e-13;1!UBERON:0001021;6.82e-13;1!UBERON:0001905;4.42e-07;2!UBERON:0003714;4.42e-07;2!UBERON:0005162;4.42e-07;2!UBERON:0000122;4.42e-07;2!UBERON:0002757;4.42e-07;2!UBERON:0010134;4.42e-07;2!UBERON:0006955;4.42e-07;2!UBERON:0005408;4.42e-07;2!UBERON:0004801;4.42e-07;2!UBERON:0001899;4.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.06e-13,1;UBERON:0001785,6.06e-13,1;UBERON:0002464,6.06e-13,1;UBERON:0004904,6.06e-13,1;UBERON:0001021,6.06e-13,1;UBERON:0003902,6.06e-13,1;UBERON:0005425,6.06e-13,1;UBERON:0000966,8.57e-09,6;UBERON:0005388,8.57e-09,6;UBERON:0001802,8.57e-09,6;UBERON:0006955,3.70e-07,2;UBERON:0004801,3.70e-07,2;UBERON:0003714,4.17e-07,2;UBERON:0005162,4.17e-07,2;UBERON:0000122,4.17e-07,2;UBERON:0001905,4.42e-07,2;UBERON:0002757,4.42e-07,2;UBERON:0010134,4.42e-07,2;UBERON:0005408,4.42e-07,2;UBERON:0001899,4.42e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.85870796139317,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0,0.263504357079378,0.196468613246569,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.088048434013226,0,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70338495076131,0.343505344755765,0.614481528616916,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,7.60051469260776,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437299999980979,0.724999575434793,0,0,0,3.44743373241465,0,0.347249989866585,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,1.08194319871046,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,3.6651710773093,1.20116498503375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0.276697269872462,0,0,0,0,3.27834434064817,2.3187364577732,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91841556955478,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0.252071696221718,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,1.3451348888753,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.157115589916002,0.280272163313789,0.913158720509496,0,0,0.428859265059938,3.00225862292181,1.04617282831313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18845852677505,0.118920090777569,0.11294608203896,0.549702583727146,0,0.463044948647668,0.437119121007915,0,0,0,0,0,0,0,0.469919589899268,0.193373663920732,0,0,0,0,0,0,0,0.788857810965923,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.85870796139317,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0,0.263504357079378,0.196468613246569,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.088048434013226,0,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70338495076131,0.343505344755765,0.614481528616916,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,7.60051469260776,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437299999980979,0.724999575434793,0,0,0,3.44743373241465,0,0.347249989866585,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,1.08194319871046,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,3.6651710773093,1.20116498503375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0.276697269872462,0,0,0,0,3.27834434064817,2.3187364577732,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91841556955478,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0.252071696221718,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,1.3451348888753,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.157115589916002,0.280272163313789,0.913158720509496,0,0,0.428859265059938,3.00225862292181,1.04617282831313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18845852677505,0.118920090777569,0.11294608203896,0.549702583727146,0,0.463044948647668,0.437119121007915,0,0,0,0,0,0,0,0.469919589899268,0.193373663920732,0,0,0,0,0,0,0,0.788857810965923,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p@chr13:72358093..72358097,- | |short_description=p@chr13:72358093..72358097,- | ||
}} | }} |
Latest revision as of 16:58, 24 July 2015
Short description: | p@chr13:72358093..72358097, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:72358093..72358097, - |
Coexpression cluster: | C1187_anaplastic_gastric_small_carcinoid_acute_retinoblastoma_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 9.02e-25 | 2 |
keratinocyte | 1.69e-10 | 5 |
stratified squamous epithelial cell | 6.77e-09 | 6 |
keratin accumulating cell | 6.77e-09 | 6 |
stratified epithelial cell | 6.77e-09 | 6 |
keratinizing barrier epithelial cell | 6.77e-09 | 6 |
epithelial fate stem cell | 6.77e-09 | 6 |
stratified epithelial stem cell | 6.77e-09 | 6 |
surface ectodermal cell | 6.77e-09 | 6 |
neural cell | 3.08e-07 | 25 |
epithelial cell of cervix | 3.70e-07 | 2 |
epithelial cell of large intestine | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.06e-13 | 1 |
cranial nerve | 6.06e-13 | 1 |
nerve trunk | 6.06e-13 | 1 |
nerve connecting eye with brain | 6.06e-13 | 1 |
nerve | 6.06e-13 | 1 |
retinal neural layer | 6.06e-13 | 1 |
presumptive neural retina | 6.06e-13 | 1 |
retina | 8.57e-09 | 6 |
photoreceptor array | 8.57e-09 | 6 |
posterior segment of eyeball | 8.57e-09 | 6 |
uterine epithelium | 3.70e-07 | 2 |
cervix epithelium | 3.70e-07 | 2 |
neural tissue | 4.17e-07 | 2 |
multi cell component structure | 4.17e-07 | 2 |
neuron projection bundle | 4.17e-07 | 2 |
pineal body | 4.42e-07 | 2 |
regional part of epithalamus | 4.42e-07 | 2 |
secretory circumventricular organ | 4.42e-07 | 2 |
circumventricular organ | 4.42e-07 | 2 |
epithalamus | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 6.72e-21 | 14 |
cell type cancer | 6.52e-07 | 143 |