FFCP PHASE1:Hg19::chr13:72166623..72166627,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:72166623..72166627,- | |||
|coexpression_cluster_id=C1187 | |||
|description=CAGE_peak_at_chr13:72166623..72166627,- | |description=CAGE_peak_at_chr13:72166623..72166627,- | ||
|id=chr13:72166623..72166627,- | |id=chr13:72166623..72166627,- | ||
|ontology_enrichment_celltype=CL:0002618!9.97e-07!3 | |ontology_enrichment_celltype=CL:0002618!9.97e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.54e-29;2!CL:0000242;4.54e-29;2!CL:0000312;2.99e-12;5!CL:0000240;2.29e-10;6!CL:0000311;2.29e-10;6!CL:0000079;2.29e-10;6!CL:0000237;2.29e-10;6!CL:0002319;1.21e-08;25!CL:0002535;1.44e-08;2!CL:0000047;2.23e-08;2!CL:0000095;2.86e-07;17!CL:0000362;3.34e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.94e-29,2;CL:0000312,2.82e-12,5;CL:0000240,2.19e-10,6;CL:0000311,2.19e-10,6;CL:0000079,2.19e-10,6;CL:0000237,2.19e-10,6;CL:0000036,2.19e-10,6;CL:0000357,2.19e-10,6;CL:0000114,2.19e-10,6;CL:0002319,1.12e-08,25;CL:0002535,1.50e-08,2;CL:0000095,2.54e-07,17;CL:0000123,2.54e-07,17;CL:0000362,3.24e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.29e-10;6!CL:0000114;2.29e-10;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;7.48e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.26e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0003056!5.28e-09!61;UBERON:0003075!2.96e-08!86;UBERON:0007284!2.96e-08!86;UBERON:0002346!1.35e-07!90;UBERON:0000073!1.92e-07!94;UBERON:0001016!1.92e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.44e-08;2!UBERON:0004801;1.44e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.50e-08,2;UBERON:0004801,1.50e-08,2 | |||
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| ||
|short_description=p@chr13:72166623..72166627,- | |short_description=p@chr13:72166623..72166627,- | ||
}} | }} |
Latest revision as of 16:58, 24 July 2015
Short description: | p@chr13:72166623..72166627, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:72166623..72166627, - |
Coexpression cluster: | C1187_anaplastic_gastric_small_carcinoid_acute_retinoblastoma_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.94e-29 | 2 |
keratinocyte | 2.82e-12 | 5 |
stratified squamous epithelial cell | 2.19e-10 | 6 |
keratin accumulating cell | 2.19e-10 | 6 |
stratified epithelial cell | 2.19e-10 | 6 |
keratinizing barrier epithelial cell | 2.19e-10 | 6 |
epithelial fate stem cell | 2.19e-10 | 6 |
stratified epithelial stem cell | 2.19e-10 | 6 |
surface ectodermal cell | 2.19e-10 | 6 |
neural cell | 1.12e-08 | 25 |
epithelial cell of cervix | 1.50e-08 | 2 |
neuron associated cell | 2.54e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 2.54e-07 | 17 |
epidermal cell | 3.24e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.50e-08 | 2 |
cervix epithelium | 1.50e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.26e-10 | 14 |