FFCP PHASE1:Hg19::chr11:12030834..12030845,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:12030834..12030845,-
|short_description=p7@DKK3
|description=CAGE_peak_7_at_DKK3_5end
|association_with_transcript=31bp_to_ENST00000534479_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27122 | |EntrezGene=27122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2893 | |HGNC=2893 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000534479_5end | |||
|cluster_id=chr11:12030834..12030845,- | |||
|coexpression_cluster_id=C2103 | |||
|description=CAGE_peak_7_at_DKK3_5end | |||
|id=chr11:12030834..12030845,- | |||
|ontology_enrichment_celltype=CL:0000055!2.05e-11!180;CL:0000220!3.13e-10!246;CL:0000222!3.83e-10!119;CL:0002321!9.20e-10!248;CL:0000057!8.88e-09!75;CL:0000192!1.55e-08!42;CL:0000514!1.55e-08!42;CL:0000183!2.77e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.87e-08;19!CL:0000359;4.06e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,8.09e-09,43;CL:0000514,8.09e-09,43;CL:0000349,1.97e-08,19;CL:0000222,2.47e-08,121;CL:0002321,1.51e-07,250;CL:0000359,2.20e-07,32;CL:0000057,8.88e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;1.48e-11;53!UBERON:0002616;1.48e-11;53!UBERON:0001893;1.94e-11;34!UBERON:0003528;2.68e-11;34!UBERON:0002020;2.68e-11;34!UBERON:0002791;5.52e-11;32!UBERON:0001869;1.21e-10;32!UBERON:0002780;1.04e-09;41!UBERON:0001890;1.04e-09;41!UBERON:0000955;1.80e-09;68!UBERON:0001017;1.03e-08;75!UBERON:0000956;1.35e-08;25!UBERON:0000203;1.35e-08;25!UBERON:0004733;4.80e-08;12!UBERON:0002028;4.80e-08;12!UBERON:0002619;1.14e-07;22!UBERON:0005631;3.30e-07;10!UBERON:0000158;3.30e-07;10!UBERON:0004732;4.64e-07;13!UBERON:0000125;6.34e-07;9!UBERON:0002308;6.34e-07;9!UBERON:0000305;8.20e-07;7 | |||
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| ||
|short_description=p7@DKK3 | |||
}} | }} |
Latest revision as of 05:48, 16 September 2015
Short description: | p7@DKK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DKK3_5end |
Coexpression cluster: | C2103_Fibroblast_putamen_left_caudate_hippocampus_heart_amniotic |
Association with transcript: | 31bp_to_ENST00000534479_5end |
EntrezGene: | DKK3 |
HGNC: | 2893 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 8.09e-09 | 43 |
smooth muscle myoblast | 8.09e-09 | 43 |
extraembryonic cell | 1.97e-08 | 19 |
mesodermal cell | 2.47e-08 | 121 |
embryonic cell | 1.51e-07 | 250 |
vascular associated smooth muscle cell | 2.20e-07 | 32 |
fibroblast | 8.88e-07 | 76 |