FFCP PHASE1:Hg19::chr19:17970693..17970729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6142 | |EntrezGene=6142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10311 | |HGNC=10311 | ||
|TSSclassifier=strong | |||
|UniProt=B4DM74,Q02543 | |UniProt=B4DM74,Q02543 | ||
|association_with_transcript=0bp_to_ENST00000420197,uc002nhp.1_5end | |association_with_transcript=0bp_to_ENST00000420197,uc002nhp.1_5end | ||
|cluster_id=chr19:17970693..17970729,+ | |||
|coexpression_cluster_id=C447 | |||
|description=CAGE_peak_1_at_RPL18A_5end | |description=CAGE_peak_1_at_RPL18A_5end | ||
|id=chr19:17970693..17970729,+ | |id=chr19:17970693..17970729,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.38e-33!679;CL:0000004!1.38e-33!679;CL:0000255!1.38e-33!679;CL:0000012!4.22e-33!682;CL:0002321!2.10e-30!248;CL:0000220!7.57e-30!246;CL:0000144!1.86e-23!625;CL:0000055!1.87e-21!180;CL:0000222!2.00e-21!119;CL:0000066!2.60e-19!254;CL:0000003!9.42e-19!722;CL:0000183!2.19e-18!59;CL:0000393!3.56e-17!60;CL:0000211!3.56e-17!60;CL:0002371!7.94e-17!591;CL:0000680!7.99e-17!57;CL:0000056!7.99e-17!57;CL:0000355!7.99e-17!57;CL:0000187!1.22e-16!54;CL:0000192!2.23e-14!42;CL:0000514!2.23e-14!42;CL:0000359!4.32e-11!32;CL:0000063!3.22e-08!578;CL:0000076!8.49e-08!62;CL:0000221!1.62e-07!71 | |ontology_enrichment_celltype=CL:0000548!1.38e-33!679;CL:0000004!1.38e-33!679;CL:0000255!1.38e-33!679;CL:0000012!4.22e-33!682;CL:0002321!2.10e-30!248;CL:0000220!7.57e-30!246;CL:0000144!1.86e-23!625;CL:0000055!1.87e-21!180;CL:0000222!2.00e-21!119;CL:0000066!2.60e-19!254;CL:0000003!9.42e-19!722;CL:0000183!2.19e-18!59;CL:0000393!3.56e-17!60;CL:0000211!3.56e-17!60;CL:0002371!7.94e-17!591;CL:0000680!7.99e-17!57;CL:0000056!7.99e-17!57;CL:0000355!7.99e-17!57;CL:0000187!1.22e-16!54;CL:0000192!2.23e-14!42;CL:0000514!2.23e-14!42;CL:0000359!4.32e-11!32;CL:0000063!3.22e-08!578;CL:0000076!8.49e-08!62;CL:0000221!1.62e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.94e-10;32!CL:0000192;6.74e-10;43!CL:0000187;1.60e-09;55!CL:0000393;1.11e-08;61!CL:0000211;1.11e-08;61!CL:1000449;6.17e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.82e-30,250;CL:0000222,2.28e-21,121;CL:0000066,1.46e-19,253;CL:0000393,1.35e-16,61;CL:0000211,1.35e-16,61;CL:0000680,3.10e-16,58;CL:0000056,3.10e-16,58;CL:0000355,3.10e-16,58;CL:0000187,4.95e-16,55;CL:0000192,9.84e-14,43;CL:0000514,9.84e-14,43;CL:0000359,4.32e-11,32;CL:0000076,6.00e-08,63;CL:0000221,1.16e-07,72;CL:1000449,5.74e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;6.74e-10;43!CL:0000355;4.21e-09;58 | |||
|ontology_enrichment_disease=DOID:14566!7.03e-08!239;DOID:162!1.27e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,7.03e-08,239;DOID:162,1.27e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000486!1.47e-19!82;UBERON:0004290!6.62e-19!70;UBERON:0000914!3.03e-18!83;UBERON:0002329!3.03e-18!83;UBERON:0003077!3.03e-18!83;UBERON:0003059!3.03e-18!83;UBERON:0007282!3.03e-18!83;UBERON:0009618!3.03e-18!83;UBERON:0007285!3.03e-18!83;UBERON:0005256!1.40e-16!143;UBERON:0003104!3.47e-16!238;UBERON:0009142!3.47e-16!238;UBERON:0001134!1.95e-15!61;UBERON:0002036!1.95e-15!61;UBERON:0003082!1.95e-15!61;UBERON:0002385!3.65e-14!63;UBERON:0001015!3.65e-14!63;UBERON:0000383!3.65e-14!63;UBERON:0002100!7.51e-14!216;UBERON:0000490!9.42e-14!138;UBERON:0002049!1.15e-11!79;UBERON:0007798!1.15e-11!79;UBERON:0001637!1.81e-11!42;UBERON:0003509!1.81e-11!42;UBERON:0004572!1.81e-11!42;UBERON:0003914!2.34e-11!118;UBERON:0004872!3.07e-11!84;UBERON:0001981!4.56e-11!60;UBERON:0007500!4.56e-11!60;UBERON:0004537!4.56e-11!60;UBERON:0006965!4.56e-11!60;UBERON:0000055!3.42e-10!69;UBERON:0000119!1.01e-09!312;UBERON:0000483!2.66e-09!309;UBERON:0000481!3.60e-08!347;UBERON:0004573!3.84e-08!33;UBERON:0004571!3.84e-08!33;UBERON:0001737!2.09e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;2.62e-08;74!UBERON:0001637;4.02e-08;42!UBERON:0003509;4.02e-08;42!UBERON:0004572;4.02e-08;42!UBERON:0007500;6.72e-08;56!UBERON:0001981;6.72e-08;56!UBERON:0004537;6.72e-08;56!UBERON:0001737;2.08e-07;9!UBERON:0001557;2.08e-07;9!UBERON:0004573;2.51e-07;33!UBERON:0004571;2.51e-07;33!UBERON:0000072;2.52e-07;37!UBERON:0006555;6.17e-07;15!UBERON:0004819;6.17e-07;15!UBERON:0001285;6.17e-07;15!UBERON:0007684;6.17e-07;15 | |||
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| ||
|short_description=p1@RPL18A | |short_description=p1@RPL18A | ||
}} | }} |
Latest revision as of 13:16, 16 September 2015
Short description: | p1@RPL18A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL18A_5end |
Coexpression cluster: | C447_Alveolar_Bronchial_Smooth_Renal_Tracheal_Keratocytes_Hepatic |
Association with transcript: | 0bp_to_ENST00000420197, uc002nhp.1_5end |
EntrezGene: | RPL18A |
HGNC: | 10311 |
UniProt: | B4DM74Q02543 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.82e-30 | 250 |
mesodermal cell | 2.28e-21 | 121 |
epithelial cell | 1.46e-19 | 253 |
electrically responsive cell | 1.35e-16 | 61 |
electrically active cell | 1.35e-16 | 61 |
muscle precursor cell | 3.10e-16 | 58 |
myoblast | 3.10e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.10e-16 | 58 |
muscle cell | 4.95e-16 | 55 |
smooth muscle cell | 9.84e-14 | 43 |
smooth muscle myoblast | 9.84e-14 | 43 |
vascular associated smooth muscle cell | 4.32e-11 | 32 |
squamous epithelial cell | 6.00e-08 | 63 |
ectodermal cell | 1.16e-07 | 72 |
epithelial cell of nephron | 5.74e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 7.03e-08 | 239 |
cancer | 1.27e-07 | 235 |