FFCP PHASE1:Hg19::chr11:117800095..117800134,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:117800095..117800134,-
|short_description=p1@TMPRSS13
|description=CAGE_peak_1_at_TMPRSS13_5end
|association_with_transcript=0bp_to_ENST00000336500,ENST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84000 | |EntrezGene=84000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29808 | |HGNC=29808 | ||
|UniProt=E9PHM4, | |TSSclassifier=strong | ||
|UniProt=E9PHM4,F8WAJ3,Q9BYE2,E9PIJ5,Q1RMF8 | |||
|association_with_transcript=0bp_to_ENST00000336500,ENST00000430170,ENST00000445164,ENST00000525794,ENST00000528626,uc001prs.1,uc001pru.1_5end | |||
|cluster_id=chr11:117800095..117800134,- | |||
|description=CAGE_peak_1_at_TMPRSS13_5end | |||
|id=chr11:117800095..117800134,- | |||
|ontology_enrichment_celltype=CL:0002076!1.02e-21!43;CL:0000066!2.20e-20!254;CL:0000223!1.32e-15!59;CL:0002251!6.32e-12!21;CL:0002368!1.07e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.18e-13;42!CL:0002251;1.17e-10;20!CL:0002159;7.35e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.84e-18,253;CL:0002076,6.38e-16,42;CL:0000223,2.57e-12,58;CL:0002251,1.13e-10,20;CL:0002159,6.41e-07,14;CL:0002368,9.58e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;3.37e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!6.12e-13!14;DOID:305!3.04e-11!106;DOID:0050687!1.49e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.22e-13;14!DOID:5093;9.38e-09;4!DOID:1612;9.38e-09;4!DOID:299;3.76e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.36e-13,14;DOID:305,2.25e-10,106;DOID:5093,1.02e-08,4;DOID:1612,1.02e-08,4;DOID:0050687,5.13e-08,143;DOID:299,4.29e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.84e-22!169;UBERON:0000925!9.84e-22!169;UBERON:0006595!9.84e-22!169;UBERON:0001004!2.19e-16!72;UBERON:0001007!2.45e-15!155;UBERON:0001555!2.45e-15!155;UBERON:0007026!2.45e-15!155;UBERON:0000077!1.42e-13!130;UBERON:0004921!1.38e-12!129;UBERON:0004185!1.38e-12!129;UBERON:0000161!1.16e-11!35;UBERON:0000464!1.46e-11!104;UBERON:0000166!2.36e-11!21;UBERON:0005911!4.38e-11!82;UBERON:0000065!3.89e-10!53;UBERON:0000466!6.71e-10!126;UBERON:0005178!1.50e-09!34;UBERON:0002224!1.50e-09!34;UBERON:0005181!4.09e-09!35;UBERON:0001041!5.38e-09!98;UBERON:0000165!1.24e-08!28;UBERON:0000930!1.24e-08!28;UBERON:0000915!1.25e-08!52;UBERON:0005153!1.98e-08!37;UBERON:0003124!8.27e-08!7;UBERON:0000344!1.02e-07!12;UBERON:0002048!1.48e-07!22;UBERON:0000117!1.48e-07!22;UBERON:0000171!1.48e-07!22;UBERON:0000170!1.48e-07!22;UBERON:0005597!1.48e-07!22;UBERON:0000118!1.48e-07!22;UBERON:0004807!9.42e-07!28;UBERON:0001044!9.66e-07!6;UBERON:0003293!9.66e-07!6;UBERON:0003294!9.66e-07!6;UBERON:0010047!9.66e-07!6;UBERON:0000167!9.66e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0005178;1.03e-08;34!UBERON:0002224;1.03e-08;34!UBERON:0000165;1.33e-07;28!UBERON:0005181;1.56e-07;35!UBERON:0000161;3.28e-07;19!UBERON:0000166;3.28e-07;19!UBERON:0001987;3.35e-07;4!UBERON:0000915;6.66e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.61e-16,160;UBERON:0000925,6.61e-16,160;UBERON:0006595,6.61e-16,160;UBERON:0001004,1.98e-13,74;UBERON:0001007,3.49e-11,145;UBERON:0001555,3.49e-11,145;UBERON:0007026,3.49e-11,145;UBERON:0000915,1.17e-09,52;UBERON:0000065,2.33e-09,54;UBERON:0005178,2.98e-09,34;UBERON:0002224,2.98e-09,34;UBERON:0001041,5.61e-09,87;UBERON:0005181,7.14e-09,35;UBERON:0000166,7.47e-09,22;UBERON:0004921,1.35e-08,118;UBERON:0001987,2.48e-07,4;UBERON:0004340,2.48e-07,4;UBERON:0000165,2.84e-07,29;UBERON:0000930,2.84e-07,29;UBERON:0005911,7.64e-07,82 | |||
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| ||
|short_description=p1@TMPRSS13 | |||
}} | }} |
Latest revision as of 22:47, 15 September 2015
Short description: | p1@TMPRSS13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMPRSS13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000336500, ENST00000430170, ENST00000445164, ENST00000525794, ENST00000528626, uc001prs.1, uc001pru.1_5end |
EntrezGene: | TMPRSS13 |
HGNC: | 29808 |
UniProt: | E9PHM4F8WAJ3Q9BYE2E9PIJ5Q1RMF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.84e-18 | 253 |
endo-epithelial cell | 6.38e-16 | 42 |
endodermal cell | 2.57e-12 | 58 |
epithelial cell of alimentary canal | 1.13e-10 | 20 |
general ecto-epithelial cell | 6.41e-07 | 14 |
respiratory epithelial cell | 9.58e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 6.61e-16 | 160 |
endoderm | 6.61e-16 | 160 |
presumptive endoderm | 6.61e-16 | 160 |
respiratory system | 1.98e-13 | 74 |
digestive system | 3.49e-11 | 145 |
digestive tract | 3.49e-11 | 145 |
primitive gut | 3.49e-11 | 145 |
thoracic segment of trunk | 1.17e-09 | 52 |
respiratory tract | 2.33e-09 | 54 |
thoracic cavity element | 2.98e-09 | 34 |
thoracic cavity | 2.98e-09 | 34 |
foregut | 5.61e-09 | 87 |
thoracic segment organ | 7.14e-09 | 35 |
oral opening | 7.47e-09 | 22 |
subdivision of digestive tract | 1.35e-08 | 118 |
placenta | 2.48e-07 | 4 |
allantois | 2.48e-07 | 4 |
mouth | 2.84e-07 | 29 |
stomodeum | 2.84e-07 | 29 |
endo-epithelium | 7.64e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.36e-13 | 14 |
carcinoma | 2.25e-10 | 106 |
thoracic cancer | 1.02e-08 | 4 |
breast cancer | 1.02e-08 | 4 |
cell type cancer | 5.13e-08 | 143 |
adenocarcinoma | 4.29e-07 | 25 |