FFCP PHASE1:Hg19::chr18:67715553..67715566,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25914 | |EntrezGene=25914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18654 | |HGNC=18654 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-253bp_to_AK129866_5end | |association_with_transcript=-253bp_to_AK129866_5end | ||
|cluster_id=chr18:67715553..67715566,- | |||
|description=CAGE_peak_10_at_RTTN_5end | |description=CAGE_peak_10_at_RTTN_5end | ||
|id=chr18:67715553..67715566,- | |id=chr18:67715553..67715566,- | ||
|ontology_enrichment_celltype=CL:0000144!9.20e-12!625;CL:0002371!4.34e-11!591;CL:0000548!1.53e-09!679;CL:0000004!1.53e-09!679;CL:0000255!1.53e-09!679;CL:0000012!2.30e-09!682;CL:0000055!9.68e-09!180;CL:0002368!9.62e-08!13;CL:0000003!1.20e-07!722;CL:0002620!1.63e-07!23;CL:0000723!2.91e-07!436;CL:0000057!4.59e-07!75;CL:0002202!8.68e-07!9;CL:0002632!8.68e-07!9;CL:0000034!8.92e-07!444 | |ontology_enrichment_celltype=CL:0000144!9.20e-12!625;CL:0002371!4.34e-11!591;CL:0000548!1.53e-09!679;CL:0000004!1.53e-09!679;CL:0000255!1.53e-09!679;CL:0000012!2.30e-09!682;CL:0000055!9.68e-09!180;CL:0002368!9.62e-08!13;CL:0000003!1.20e-07!722;CL:0002620!1.63e-07!23;CL:0000723!2.91e-07!436;CL:0000057!4.59e-07!75;CL:0002202!8.68e-07!9;CL:0002632!8.68e-07!9;CL:0000034!8.92e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000515;6.22e-24;3!CL:0000056;4.14e-18;4!CL:0000307;3.98e-11;3!CL:0000680;1.38e-10;7!CL:0002368;1.39e-09;13!CL:0002327;9.36e-09;4!CL:0002202;3.54e-08;9!CL:0002632;3.54e-08;9!CL:0000860;4.21e-07;33!CL:0002057;4.21e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,4.67e-18,4;CL:0000068,6.99e-11,3;CL:0000069,6.99e-11,3;CL:0000307,6.99e-11,3;CL:0000377,6.99e-11,3;CL:0002368,1.56e-09,13;CL:0002327,7.88e-09,4;CL:0000860,3.40e-08,42;CL:0002057,3.40e-08,42;CL:0002202,3.92e-08,9;CL:0002632,3.92e-08,9;CL:0000473,4.52e-07,48;CL:0000234,4.52e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000515;4.14e-18;4!CL:0000377;3.98e-11;3 | |||
|ontology_enrichment_disease=DOID:17!4.38e-08!5;DOID:450!4.38e-08!5;DOID:66!4.38e-08!5;DOID:423!4.38e-08!5;DOID:0080000!4.38e-08!5;DOID:11722!4.38e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!8.29e-07!33;UBERON:0004571!8.29e-07!33;UBERON:0003102!9.24e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;9.36e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.88e-09,4;UBERON:0005333,7.88e-09,4;UBERON:0008425,7.88e-09,4;UBERON:0005311,7.88e-09,4 | |||
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| ||
|short_description=p10@RTTN | |short_description=p10@RTTN | ||
}} | }} |
Latest revision as of 06:56, 20 September 2015
Short description: | p10@RTTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RTTN_5end |
Coexpression cluster: | NA |
Association with transcript: | -253bp_to_AK129866_5end |
EntrezGene: | RTTN |
HGNC: | 18654 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 4.67e-18 | 4 |
duct epithelial cell | 6.99e-11 | 3 |
branched duct epithelial cell | 6.99e-11 | 3 |
tracheal epithelial cell | 6.99e-11 | 3 |
tracheoblast | 6.99e-11 | 3 |
respiratory epithelial cell | 1.56e-09 | 13 |
mammary gland epithelial cell | 7.88e-09 | 4 |
classical monocyte | 3.40e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.40e-08 | 42 |
epithelial cell of tracheobronchial tree | 3.92e-08 | 9 |
epithelial cell of lower respiratory tract | 3.92e-08 | 9 |
defensive cell | 4.52e-07 | 48 |
phagocyte | 4.52e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 7.88e-09 | 4 |
mammary bud | 7.88e-09 | 4 |
mammary ridge | 7.88e-09 | 4 |
mammary placode | 7.88e-09 | 4 |