FFCP PHASE1:Hg19::chr13:102104920..102104936,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9358 | |EntrezGene=9358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6164 | |HGNC=6164 | ||
|TSSclassifier=strong | |||
|UniProt=O95965,F5GZX0 | |UniProt=O95965,F5GZX0 | ||
|association_with_transcript=-29bp_to_ENST00000376180,ENST00000478675,ENST00000537118,NM_004791,uc001vpb.2,uc001vpc.3,uc010agb.2_5end | |association_with_transcript=-29bp_to_ENST00000376180,ENST00000478675,ENST00000537118,NM_004791,uc001vpb.2,uc001vpc.3,uc010agb.2_5end | ||
|cluster_id=chr13:102104920..102104936,+ | |||
|coexpression_cluster_id=C698 | |||
|description=CAGE_peak_4_at_ITGBL1_5end | |description=CAGE_peak_4_at_ITGBL1_5end | ||
|id=chr13:102104920..102104936,+ | |id=chr13:102104920..102104936,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.23e-33!180;CL:0000057!8.41e-25!75;CL:0002620!8.71e-13!23;CL:0000680!5.29e-11!57;CL:0000056!5.29e-11!57;CL:0000355!5.29e-11!57;CL:0000048!3.66e-10!430;CL:0000723!1.80e-09!436;CL:0000192!2.06e-09!42;CL:0000514!2.06e-09!42;CL:0000187!3.93e-09!54;CL:0000034!1.35e-08!444;CL:0000183!4.74e-08!59;CL:0000359!1.64e-07!32;CL:0002334!2.27e-07!12;CL:0000393!3.09e-07!60;CL:0000211!3.09e-07!60 | |ontology_enrichment_celltype=CL:0000055!2.23e-33!180;CL:0000057!8.41e-25!75;CL:0002620!8.71e-13!23;CL:0000680!5.29e-11!57;CL:0000056!5.29e-11!57;CL:0000355!5.29e-11!57;CL:0000048!3.66e-10!430;CL:0000723!1.80e-09!436;CL:0000192!2.06e-09!42;CL:0000514!2.06e-09!42;CL:0000187!3.93e-09!54;CL:0000034!1.35e-08!444;CL:0000183!4.74e-08!59;CL:0000359!1.64e-07!32;CL:0002334!2.27e-07!12;CL:0000393!3.09e-07!60;CL:0000211!3.09e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.24e-10;23!CL:0002334;2.85e-10;12!CL:0002595;6.81e-09;5!CL:1000306;1.67e-08;4!CL:0002547;1.67e-08;4!CL:0000056;2.07e-08;4!CL:0000057;7.33e-08;73!CL:0000499;8.07e-08;28!CL:0002615;1.05e-07;3!CL:0000136;1.49e-07;13!CL:0002579;1.94e-07;3!CL:0002580;2.49e-07;3!CL:0000515;4.01e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.66e-23,76;CL:0000048,1.41e-12,427;CL:0000723,4.18e-12,433;CL:0000034,1.70e-11,441;CL:0002620,8.02e-11,23;CL:0002334,3.00e-10,12;CL:0000136,8.19e-10,15;CL:0000134,1.23e-09,354;CL:0002320,4.08e-09,361;CL:0002595,7.63e-09,5;CL:1000306,1.34e-08,4;CL:0002547,1.34e-08,4;CL:0000515,2.29e-08,4;CL:0000499,7.89e-08,28;CL:0000219,8.73e-08,386;CL:0002615,1.05e-07,3;CL:0002579,1.92e-07,3;CL:0002580,2.50e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000515;2.07e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;3.26e-09;5!DOID:450;3.26e-09;5!DOID:66;3.26e-09;5!DOID:423;3.26e-09;5!DOID:0080000;3.26e-09;5!DOID:11722;3.26e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.89e-09,5;DOID:450,2.89e-09,5;DOID:66,2.89e-09,5;DOID:423,2.89e-09,5;DOID:0080000,2.89e-09,5;DOID:11722,2.89e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.08e-13!83;UBERON:0002329!1.08e-13!83;UBERON:0003077!1.08e-13!83;UBERON:0003059!1.08e-13!83;UBERON:0007282!1.08e-13!83;UBERON:0009618!1.08e-13!83;UBERON:0007285!1.08e-13!83;UBERON:0004290!5.36e-11!70;UBERON:0004573!5.57e-11!33;UBERON:0004571!5.57e-11!33;UBERON:0001134!4.49e-10!61;UBERON:0002036!4.49e-10!61;UBERON:0003082!4.49e-10!61;UBERON:0002385!5.23e-10!63;UBERON:0001015!5.23e-10!63;UBERON:0000383!5.23e-10!63;UBERON:0003102!8.47e-10!95;UBERON:0000486!2.49e-09!82;UBERON:0001637!4.41e-09!42;UBERON:0003509!4.41e-09!42;UBERON:0004572!4.41e-09!42;UBERON:0002049!1.72e-08!79;UBERON:0007798!1.72e-08!79;UBERON:0000475!1.84e-08!365;UBERON:0002199!3.50e-08!45;UBERON:0002416!3.50e-08!45;UBERON:0002100!4.79e-08!216;UBERON:0003688!1.12e-07!6;UBERON:0002358!1.12e-07!6;UBERON:0003684!1.12e-07!6;UBERON:0001178!1.12e-07!6;UBERON:0001981!1.69e-07!60;UBERON:0007500!1.69e-07!60;UBERON:0004537!1.69e-07!60;UBERON:0006965!1.69e-07!60;UBERON:0002097!7.17e-07!40 | |ontology_enrichment_uberon=UBERON:0000914!1.08e-13!83;UBERON:0002329!1.08e-13!83;UBERON:0003077!1.08e-13!83;UBERON:0003059!1.08e-13!83;UBERON:0007282!1.08e-13!83;UBERON:0009618!1.08e-13!83;UBERON:0007285!1.08e-13!83;UBERON:0004290!5.36e-11!70;UBERON:0004573!5.57e-11!33;UBERON:0004571!5.57e-11!33;UBERON:0001134!4.49e-10!61;UBERON:0002036!4.49e-10!61;UBERON:0003082!4.49e-10!61;UBERON:0002385!5.23e-10!63;UBERON:0001015!5.23e-10!63;UBERON:0000383!5.23e-10!63;UBERON:0003102!8.47e-10!95;UBERON:0000486!2.49e-09!82;UBERON:0001637!4.41e-09!42;UBERON:0003509!4.41e-09!42;UBERON:0004572!4.41e-09!42;UBERON:0002049!1.72e-08!79;UBERON:0007798!1.72e-08!79;UBERON:0000475!1.84e-08!365;UBERON:0002199!3.50e-08!45;UBERON:0002416!3.50e-08!45;UBERON:0002100!4.79e-08!216;UBERON:0003688!1.12e-07!6;UBERON:0002358!1.12e-07!6;UBERON:0003684!1.12e-07!6;UBERON:0001178!1.12e-07!6;UBERON:0001981!1.69e-07!60;UBERON:0007500!1.69e-07!60;UBERON:0004537!1.69e-07!60;UBERON:0006965!1.69e-07!60;UBERON:0002097!7.17e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.77e-13;6!UBERON:0002358;1.77e-13;6!UBERON:0003684;1.77e-13;6!UBERON:0001178;1.77e-13;6!UBERON:0004457;3.93e-11;9!UBERON:0000042;3.93e-11;9!UBERON:0004573;2.53e-09;33!UBERON:0004571;2.53e-09;33!UBERON:0003834;6.81e-09;5!UBERON:0001533;6.81e-09;5!UBERON:0004797;1.67e-08;4!UBERON:0000415;1.67e-08;4!UBERON:0007240;1.67e-08;4!UBERON:0005742;1.67e-08;4!UBERON:0005734;1.67e-08;4!UBERON:0004664;1.67e-08;4!UBERON:0004663;1.67e-08;4!UBERON:0002384;1.28e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.74e-13,6;UBERON:0002358,1.74e-13,6;UBERON:0003684,1.74e-13,6;UBERON:0001178,1.74e-13,6;UBERON:0004573,2.74e-10,33;UBERON:0004571,2.74e-10,33;UBERON:0002384,1.69e-09,371;UBERON:0003834,7.63e-09,5;UBERON:0001533,7.63e-09,5;UBERON:0000415,1.34e-08,4;UBERON:0007240,1.34e-08,4;UBERON:0005742,1.34e-08,4;UBERON:0005734,1.34e-08,4;UBERON:0004664,1.34e-08,4;UBERON:0004663,1.34e-08,4;UBERON:0002199,1.99e-08,46;UBERON:0002416,1.99e-08,46;UBERON:0004457,4.41e-08,12;UBERON:0000042,4.41e-08,12;UBERON:0003102,1.09e-07,99;UBERON:0002097,1.26e-07,41;UBERON:0001637,2.97e-07,42;UBERON:0003509,2.97e-07,42;UBERON:0004572,2.97e-07,42 | |||
|phase1_expression=29.2502190625596,10.0627246228762,31.5737865174975,63.0461779624722,33.5220820820466,48.8509573496206,5.06599756336621,0.631719873426831,0,0,0,0,0,0.74259811776028,0.994192127183747,0.672325146451775,1.20538905604795,0.730310090387373,1.46379839637152,0,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42158728576849,1.50401373190767,1.73815822752988,2.3858578411533,0.973269740605272,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,1.13061588384802,0,0,0.417989933073621,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,15.9031024542502,5.57174251324151,2.38336525463794,24.3811127636492,2.83734705758686,0,0,0,0.311211035399766,0,0,0.605429710579726,2.30470369792,0.937285727335186,0.936480230490962,0,0.149448680551801,0.117434498643765,0.161872944368132,0.561803226808994,1.22492502752936,0.245668634623536,1.65321249881225,0,4.20353779773547,0,0.718618141816238,0,0.250237039743928,0.831192346452549,2.63386572528503,6.12975591598039,6.00952235626387,0.340296549480063,3.40840307808838,1.49490172172997,2.33125091275518,4.50136644126603,1.54578793857658,2.83404594050192,1.8611685633159,2.02531598689519,1.46155507741798,4.29137416214995,1.93304787148829,0.969876340912871,12.0703261455649,2.72030665214629,0.847802961552438,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0.325808305310325,3.11980435583874,0,0,2.81780866165972,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,1.12131084345361,0.43596006883328,1.0267360014933,5.42941206182667,0,0.845302752556,0,0,0.257207374262142,0,1.5985330740966,0.57191197463259,1.08524321078289,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,1.14861935834114,1.42636905040718,8.25253448005201,14.999771546178,5.37182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,20.1731735684883,12.4900292158013,18.7665873890382,33.2681618579305,14.1444666872028,11.3703752027992,2.0694614258501,2.65690239414175,0.737476674166813,0.434418072340414,0.195801157462741,0,0,0,0,0,0,0,16.8713309316768,18.5688987678556,8.98112302185835,13.9671672688714,29.6790204458688,16.8896617200788,23.7468906311986,0.154209693802656,1.42049380250502,0.574890092096664,0,0,0,0,0,1.95184561879831,1.0925470080403,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.307007349452259,0.413509717453592,0.214840489736547,0.290033387828457,0.255679882248303,0,0,0,0,0,0.929691098594572,38.4071063133381,0,0,0,0,0.37064843820784,2.00374841438788,0.744316738719335,1.89827654831236,0.762520775695299,0.767693373934002,0.42793898803392,0.318203247925937,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,1.58510321173008,0,0.48763373908959,2.68084838594413,1.05650146756755,0.682499557039929,0.282810863907425,0,1.65409603063837,1.32687795048244,5.69986150829892,0,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0.88424136911809,0,0,1.89996871767898,0.658589785919804,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,1.9924798825107,0,0,0,0,10.2643063928396,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39010475182674,0,0,0.664653872707185,0,0.941798755221676,0,0,0.277349346026277,0,0.195984794828755,0,0,0.171986032471617,0,0,0,0.387956065953678,0,0,0.411125773940253,0,0,0,0,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0,0.372757606696298,0,0.135904206073614,0.104602846312333,0.305994652908965,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,3.60299883542404,1.16495949527454,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0.714695326373367,0,1.77987976358325,2.17199840701485,0,0.653174720218818,0,0,0.511164065356265,0.113312091520126,0,0,0,0,0,0,0.747511887973863,0,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,1.89403005275089,2.51567901752575,0,0.915360273587694,0.151230923763239,1.70980920641059,0,0.796483835818512,0,0.465788870628778,1.65882483136342,2.39257543102195,0,0.601030435988874,0.761610424337591,0,0.181848659202559,0.214821114084977,0,0,1.60011105865261,1.03018711554838,2.02049693259551,8.83294287600557,0,0,0,2.493765180635,0.231522474323834,0,3.22359913946677,1.54400723580486,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0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| ||
|short_description=p4@ITGBL1 | |short_description=p4@ITGBL1 | ||
}} | }} |
Latest revision as of 08:37, 16 September 2015
Short description: | p4@ITGBL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITGBL1_5end |
Coexpression cluster: | C698_Smooth_Adipocyte_Fibroblast_Preadipocyte_Olfactory_Ewing_basal |
Association with transcript: | -29bp_to_ENST00000376180, ENST00000478675, ENST00000537118, NM_004791, uc001vpb.2, uc001vpc.3, uc010agb.2_5end |
EntrezGene: | ITGBL1 |
HGNC: | 6164 |
UniProt: | O95965F5GZX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.66e-23 | 76 |
multi fate stem cell | 1.41e-12 | 427 |
somatic stem cell | 4.18e-12 | 433 |
stem cell | 1.70e-11 | 441 |
skin fibroblast | 8.02e-11 | 23 |
preadipocyte | 3.00e-10 | 12 |
fat cell | 8.19e-10 | 15 |
mesenchymal cell | 1.23e-09 | 354 |
connective tissue cell | 4.08e-09 | 361 |
smooth muscle cell of the subclavian artery | 7.63e-09 | 5 |
fibroblast of tunica adventitia of artery | 1.34e-08 | 4 |
fibroblast of the aortic adventitia | 1.34e-08 | 4 |
skeletal muscle myoblast | 2.29e-08 | 4 |
stromal cell | 7.89e-08 | 28 |
motile cell | 8.73e-08 | 386 |
adipocyte of omentum tissue | 1.05e-07 | 3 |
omentum preadipocyte | 1.92e-07 | 3 |
preadipocyte of the breast | 2.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.74e-13 | 6 |
peritoneum | 1.74e-13 | 6 |
abdominal cavity | 1.74e-13 | 6 |
visceral peritoneum | 1.74e-13 | 6 |
systemic artery | 2.74e-10 | 33 |
systemic arterial system | 2.74e-10 | 33 |
connective tissue | 1.69e-09 | 371 |
thoracic segment blood vessel | 7.63e-09 | 5 |
subclavian artery | 7.63e-09 | 5 |
artery wall | 1.34e-08 | 4 |
tunica adventitia of artery | 1.34e-08 | 4 |
adventitia | 1.34e-08 | 4 |
tunica adventitia of blood vessel | 1.34e-08 | 4 |
aorta tunica adventitia | 1.34e-08 | 4 |
aorta wall | 1.34e-08 | 4 |
integument | 1.99e-08 | 46 |
integumental system | 1.99e-08 | 46 |
cavity lining | 4.41e-08 | 12 |
serous membrane | 4.41e-08 | 12 |
surface structure | 1.09e-07 | 99 |
skin of body | 1.26e-07 | 41 |
artery | 2.97e-07 | 42 |
arterial blood vessel | 2.97e-07 | 42 |
arterial system | 2.97e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.89e-09 | 5 |
myotonic disease | 2.89e-09 | 5 |
muscle tissue disease | 2.89e-09 | 5 |
myopathy | 2.89e-09 | 5 |
muscular disease | 2.89e-09 | 5 |
myotonic dystrophy | 2.89e-09 | 5 |