FFCP PHASE1:Hg19::chr12:966094..966103,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:966094..966103,+ | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_at_chr12:966094..966103,+ | |description=CAGE_peak_at_chr12:966094..966103,+ | ||
|id=chr12:966094..966103,+ | |id=chr12:966094..966103,+ | ||
|ontology_enrichment_celltype=CL:0002623!9.75e-39!3;CL:0000622!1.51e-23!5;CL:0000154!9.72e-20!6;CL:0002336!1.61e-13!1;CL:0002261!1.61e-13!1;CL:0002170!1.61e-13!1;CL:0000150!2.27e-13!9;CL:0002251!7.14e-10!21;CL:0000240!3.56e-09!6;CL:0000311!3.56e-09!6;CL:0000079!3.56e-09!6;CL:0000237!3.56e-09!6;CL:0000036!3.56e-09!6;CL:0000357!3.56e-09!6;CL:0000114!3.56e-09!6;CL:0000242!1.45e-07!2 | |ontology_enrichment_celltype=CL:0002623!9.75e-39!3;CL:0000622!1.51e-23!5;CL:0000154!9.72e-20!6;CL:0002336!1.61e-13!1;CL:0002261!1.61e-13!1;CL:0002170!1.61e-13!1;CL:0000150!2.27e-13!9;CL:0002251!7.14e-10!21;CL:0000240!3.56e-09!6;CL:0000311!3.56e-09!6;CL:0000079!3.56e-09!6;CL:0000237!3.56e-09!6;CL:0000036!3.56e-09!6;CL:0000357!3.56e-09!6;CL:0000114!3.56e-09!6;CL:0000242!1.45e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002623;1.47e-146;3!CL:0000622;1.64e-88;5!CL:0000154;5.47e-74;6!CL:0000150;9.25e-50;9!CL:0002251;4.95e-23;20!CL:0000151;4.32e-14;36!CL:0002076;6.73e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.47e-146,3;CL:0000622,1.64e-88,5;CL:0000154,5.47e-74,6;CL:0000150,9.25e-50,9;CL:0002251,4.95e-23,20;CL:0000151,3.02e-13,36;CL:0002076,1.73e-11,42;CL:0000223,1.46e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;2.66e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.66e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0001044!9.72e-20!6;UBERON:0003293!9.72e-20!6;UBERON:0003294!9.72e-20!6;UBERON:0010047!9.72e-20!6;UBERON:0000167!9.72e-20!6;UBERON:0007029!6.65e-14!1;UBERON:0006834!9.73e-14!1;UBERON:0001301!1.10e-13!1;UBERON:0002038!1.25e-13!1;UBERON:0009661!1.25e-13!1;UBERON:0003408!4.31e-12!10;UBERON:0000002!1.83e-09!6;UBERON:0001560!1.83e-09!6;UBERON:0004175!2.72e-08!25;UBERON:0002950!1.87e-07!2;UBERON:0001891!1.87e-07!2;UBERON:0009616!1.87e-07!2;UBERON:0000165!1.88e-07!28;UBERON:0000930!1.88e-07!28;UBERON:0000078!6.03e-07!18 | |ontology_enrichment_uberon=UBERON:0001044!9.72e-20!6;UBERON:0003293!9.72e-20!6;UBERON:0003294!9.72e-20!6;UBERON:0010047!9.72e-20!6;UBERON:0000167!9.72e-20!6;UBERON:0007029!6.65e-14!1;UBERON:0006834!9.73e-14!1;UBERON:0001301!1.10e-13!1;UBERON:0002038!1.25e-13!1;UBERON:0009661!1.25e-13!1;UBERON:0003408!4.31e-12!10;UBERON:0000002!1.83e-09!6;UBERON:0001560!1.83e-09!6;UBERON:0004175!2.72e-08!25;UBERON:0002950!1.87e-07!2;UBERON:0001891!1.87e-07!2;UBERON:0009616!1.87e-07!2;UBERON:0000165!1.88e-07!28;UBERON:0000930!1.88e-07!28;UBERON:0000078!6.03e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;5.47e-74;6!UBERON:0003293;5.47e-74;6!UBERON:0003294;5.47e-74;6!UBERON:0010047;5.47e-74;6!UBERON:0003408;5.47e-74;6!UBERON:0000167;5.47e-74;6!UBERON:0001041;2.02e-32;14!UBERON:0000161;3.46e-24;19!UBERON:0000166;3.46e-24;19!UBERON:0000165;9.46e-17;28!UBERON:0002365;1.06e-15;31!UBERON:0002330;1.06e-15;31!UBERON:0004921;1.77e-12;33!UBERON:0000002;1.22e-09;6!UBERON:0001560;1.22e-09;6!UBERON:0007811;2.55e-07;52!UBERON:0000033;2.56e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,5.47e-74,6;UBERON:0003293,5.47e-74,6;UBERON:0003294,5.47e-74,6;UBERON:0010047,5.47e-74,6;UBERON:0000167,5.47e-74,6;UBERON:0003408,6.56e-45,10;UBERON:0000166,4.90e-21,22;UBERON:0000165,3.30e-16,29;UBERON:0000930,3.30e-16,29;UBERON:0002365,3.16e-15,31;UBERON:0002330,3.16e-15,31;UBERON:0000161,3.02e-13,36;UBERON:0001444,5.64e-10,49;UBERON:0000002,1.22e-09,6;UBERON:0001560,1.22e-09,6;UBERON:0000033,7.75e-09,56;UBERON:0002530,1.98e-08,59;UBERON:0002553,3.51e-08,61;UBERON:0000153,4.61e-08,62;UBERON:0007811,4.61e-08,62;UBERON:0001004,6.92e-07,74 | |||
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|short_description=p@chr12:966094..966103,+ | |short_description=p@chr12:966094..966103,+ | ||
}} | }} |
Latest revision as of 13:53, 24 July 2015
Short description: | p@chr12:966094..966103, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:966094..966103, + |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.47e-146 | 3 |
acinar cell | 1.64e-88 | 5 |
protein secreting cell | 5.47e-74 | 6 |
glandular epithelial cell | 9.25e-50 | 9 |
epithelial cell of alimentary canal | 4.95e-23 | 20 |
secretory cell | 3.02e-13 | 36 |
endo-epithelial cell | 1.73e-11 | 42 |
endodermal cell | 1.46e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 5.47e-74 | 6 |
gland of oral region | 5.47e-74 | 6 |
gland of foregut | 5.47e-74 | 6 |
oral gland | 5.47e-74 | 6 |
oral cavity | 5.47e-74 | 6 |
gland of gut | 6.56e-45 | 10 |
oral opening | 4.90e-21 | 22 |
mouth | 3.30e-16 | 29 |
stomodeum | 3.30e-16 | 29 |
exocrine gland | 3.16e-15 | 31 |
exocrine system | 3.16e-15 | 31 |
orifice | 3.02e-13 | 36 |
subdivision of head | 5.64e-10 | 49 |
uterine cervix | 1.22e-09 | 6 |
neck of organ | 1.22e-09 | 6 |
head | 7.75e-09 | 56 |
gland | 1.98e-08 | 59 |
anatomical cavity | 3.51e-08 | 61 |
anterior region of body | 4.61e-08 | 62 |
craniocervical region | 4.61e-08 | 62 |
respiratory system | 6.92e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.66e-11 | 5 |