FFCP PHASE1:Hg19::chr12:95945213..95945244,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84101 | |EntrezGene=84101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20064 | |HGNC=20064 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0E7 | |UniProt=Q9H0E7 | ||
|association_with_transcript=18bp_to_NM_032147,uc001teh.2_5end | |association_with_transcript=18bp_to_NM_032147,uc001teh.2_5end | ||
|cluster_id=chr12:95945213..95945244,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_3_at_USP44_5end | |description=CAGE_peak_3_at_USP44_5end | ||
|id=chr12:95945213..95945244,- | |id=chr12:95945213..95945244,- | ||
|ontology_enrichment_celltype=CL:0002322!6.03e-33!5;CL:0000039!7.58e-15!7;CL:0000586!7.58e-15!7;CL:0000540!1.39e-10!6;CL:0000031!1.39e-10!6;CL:0000404!1.39e-10!6;CL:0000047!4.81e-08!8;CL:0000819!1.39e-07!1 | |ontology_enrichment_celltype=CL:0002322!6.03e-33!5;CL:0000039!7.58e-15!7;CL:0000586!7.58e-15!7;CL:0000540!1.39e-10!6;CL:0000031!1.39e-10!6;CL:0000404!1.39e-10!6;CL:0000047!4.81e-08!8;CL:0000819!1.39e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002322;7.60e-51;5!CL:0000039;9.11e-23;7!CL:0000586;9.11e-23;7!CL:0002321;5.82e-17;15!CL:0000540;4.63e-16;6!CL:0000404;4.63e-16;6!CL:0000785;5.16e-11;1!CL:0000819;5.16e-11;1!CL:0000148;9.01e-10;10!CL:0000147;4.08e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.00e-51,5;CL:0000039,8.37e-23,7;CL:0000586,8.37e-23,7;CL:0000540,4.52e-16,6;CL:0000031,4.52e-16,6;CL:0000404,4.52e-16,6;CL:0000047,3.38e-12,8;CL:0000819,5.43e-11,1;CL:0000148,9.01e-10,10;CL:0000541,9.01e-10,10;CL:0000147,4.08e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.91e-47;10!UBERON:0005564;1.91e-47;10!CL:0000031;4.63e-16;6 | |||
|ontology_enrichment_disease=DOID:3095!2.96e-13!22;DOID:2994!2.96e-13!22;DOID:0060073!1.39e-07!1;DOID:8675!1.39e-07!1;DOID:3371!1.69e-07!1;DOID:4549!1.69e-07!1;DOID:5861!1.69e-07!1;DOID:6496!1.69e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.06e-15;22!DOID:2994;1.06e-15;22!DOID:0060073;5.16e-11;1!DOID:8675;5.16e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.02e-15,22;DOID:2994,1.02e-15,22;DOID:0060073,5.43e-11,1;DOID:8675,5.43e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.67e-28!8;UBERON:0003135!1.87e-20!11;UBERON:0000991!4.48e-14!21;UBERON:0009196!4.48e-14!21;UBERON:0009117!4.48e-14!21;UBERON:0005564!4.48e-14!21;UBERON:0004176!2.14e-13!22;UBERON:0003101!5.84e-10!22;UBERON:0000079!5.84e-10!22;UBERON:0003133!2.67e-07!48 | |ontology_enrichment_uberon=UBERON:0000473!2.67e-28!8;UBERON:0003135!1.87e-20!11;UBERON:0000991!4.48e-14!21;UBERON:0009196!4.48e-14!21;UBERON:0009117!4.48e-14!21;UBERON:0005564!4.48e-14!21;UBERON:0004176!2.14e-13!22;UBERON:0003101!5.84e-10!22;UBERON:0000079!5.84e-10!22;UBERON:0003133!2.67e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.97e-44;8!UBERON:0003135;7.35e-32;11!UBERON:0000991;2.55e-22;21!UBERON:0003101;8.83e-16;22!UBERON:0000079;8.83e-16;22!UBERON:0000922;6.96e-10;49!UBERON:0002323;1.56e-07;45!UBERON:0003133;3.50e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.71e-44,8;UBERON:0003135,7.16e-32,11;UBERON:0000991,2.51e-22,21;UBERON:0009196,2.51e-22,21;UBERON:0009117,2.51e-22,21;UBERON:0005564,2.51e-22,21;UBERON:0004176,2.77e-21,22;UBERON:0003101,8.71e-16,22;UBERON:0000079,8.71e-16,22;UBERON:0002323,7.67e-10,46;UBERON:0003133,2.11e-09,48;UBERON:0004458,3.39e-09,49;UBERON:0003886,2.79e-08,54;UBERON:0005156,1.61e-07,59;UBERON:0000990,1.61e-07,59;UBERON:0002553,3.00e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6628989891415,16.6987508085071,22.7740128024256,10.9880718316293,21.4472723244284,9.48941133597158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284567373393656,0.797131363644112,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.36408156524854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0.617792886840502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,12.6994987287365,25.4447957704883,23.6800992676636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65882632021729,2.07604586731021,0,5.609385635809,6.41321772637345,1.28652859348783,8.52405633594075,6.28963195211387,6.16317499359211,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6628989891415,16.6987508085071,22.7740128024256,10.9880718316293,21.4472723244284,9.48941133597158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284567373393656,0.797131363644112,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.36408156524854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0.617792886840502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,12.6994987287365,25.4447957704883,23.6800992676636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65882632021729,2.07604586731021,0,5.609385635809,6.41321772637345,1.28652859348783,8.52405633594075,6.28963195211387,6.16317499359211,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@USP44 | |short_description=p3@USP44 | ||
}} | }} |
Latest revision as of 02:43, 16 September 2015
Short description: | p3@USP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_USP44_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 18bp_to_NM_032147, uc001teh.2_5end |
EntrezGene: | USP44 |
HGNC: | 20064 |
UniProt: | Q9H0E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.00e-51 | 5 |
germ line cell | 8.37e-23 | 7 |
germ cell | 8.37e-23 | 7 |
neuron | 4.52e-16 | 6 |
neuroblast | 4.52e-16 | 6 |
electrically signaling cell | 4.52e-16 | 6 |
neuronal stem cell | 3.38e-12 | 8 |
B-1 B cell | 5.43e-11 | 1 |
melanocyte | 9.01e-10 | 10 |
melanoblast | 9.01e-10 | 10 |
pigment cell | 4.08e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 6.71e-44 | 8 |
male reproductive organ | 7.16e-32 | 11 |
gonad | 2.51e-22 | 21 |
indifferent external genitalia | 2.51e-22 | 21 |
indifferent gonad | 2.51e-22 | 21 |
gonad primordium | 2.51e-22 | 21 |
external genitalia | 2.77e-21 | 22 |
male organism | 8.71e-16 | 22 |
male reproductive system | 8.71e-16 | 22 |
body cavity | 7.67e-10 | 46 |
reproductive organ | 2.11e-09 | 48 |
body cavity or lining | 3.39e-09 | 49 |
body cavity precursor | 2.79e-08 | 54 |
reproductive structure | 1.61e-07 | 59 |
reproductive system | 1.61e-07 | 59 |
anatomical cavity | 3.00e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.02e-15 | 22 |
germ cell cancer | 1.02e-15 | 22 |
lymphatic system cancer | 5.43e-11 | 1 |
lymphosarcoma | 5.43e-11 | 1 |