FFCP PHASE1:Hg19::chr11:109963515..109963534,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:109963515..109963534,+
|short_description=p1@ZC3H12C
|description=CAGE_peak_1_at_ZC3H12C_5end
|association_with_transcript=-391bp_to_uc010rwc.1_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85463 | |EntrezGene=85463 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29362 | |HGNC=29362 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-391bp_to_uc010rwc.1_5end | |||
|cluster_id=chr11:109963515..109963534,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_ZC3H12C_5end | |||
|id=chr11:109963515..109963534,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.05e-14!42;CL:0000860!1.38e-12!45;CL:0002009!2.64e-11!65;CL:0002194!1.96e-10!63;CL:0000576!1.96e-10!63;CL:0000040!1.96e-10!63;CL:0000559!1.96e-10!63;CL:0000557!9.61e-09!71;CL:0000766!2.44e-07!76;CL:0000839!8.52e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.20e-13;33!CL:0002057;3.20e-13;33!CL:0000473;2.48e-09;39!CL:0000234;2.48e-09;39!CL:0000576;4.48e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.64e-14,42;CL:0002057,6.64e-14,42;CL:0002009,3.80e-12,61;CL:0000473,6.24e-12,48;CL:0000234,6.24e-12,48;CL:0002194,3.14e-11,59;CL:0000576,3.14e-11,59;CL:0000040,3.14e-11,59;CL:0000559,3.14e-11,59;CL:0000557,2.16e-09,67;CL:0000766,8.37e-08,72;CL:0000839,2.33e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;6.14e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!5.77e-17!625;UBERON:0000480!1.38e-16!626;UBERON:0000923!1.95e-16!604;UBERON:0005291!1.95e-16!604;UBERON:0006598!1.95e-16!604;UBERON:0002532!1.95e-16!604;UBERON:0002050!2.82e-16!605;UBERON:0005423!2.82e-16!605;UBERON:0000922!6.90e-16!612;UBERON:0000468!2.33e-15!659;UBERON:0000062!4.76e-15!511;UBERON:0002204!8.38e-09!167;UBERON:0000926!1.48e-08!448;UBERON:0004120!1.48e-08!448;UBERON:0006603!1.48e-08!448;UBERON:0000481!2.60e-08!347;UBERON:0004765!3.08e-08!101;UBERON:0001434!3.08e-08!101;UBERON:0002371!2.06e-07!80;UBERON:0001474!4.63e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,1.92e-14,592;UBERON:0005423,1.02e-13,581;UBERON:0002050,6.49e-12,564;UBERON:0000923,1.54e-11,560;UBERON:0010316,1.54e-11,560;UBERON:0005291,1.54e-11,560;UBERON:0006598,1.54e-11,560;UBERON:0010317,1.54e-11,560;UBERON:0002532,1.54e-11,560;UBERON:0002204,1.80e-09,167;UBERON:0001434,6.21e-09,100;UBERON:0004765,9.54e-09,90;UBERON:0002371,8.13e-08,76;UBERON:0001474,2.03e-07,82;UBERON:0002405,4.86e-07,93 | |||
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| ||
|short_description=p1@ZC3H12C | |||
}} | }} |
Latest revision as of 01:17, 25 September 2015
Short description: | p1@ZC3H12C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZC3H12C_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -391bp_to_uc010rwc.1_5end |
EntrezGene: | ZC3H12C |
HGNC: | 29362 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.64e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.64e-14 | 42 |
macrophage dendritic cell progenitor | 3.80e-12 | 61 |
defensive cell | 6.24e-12 | 48 |
phagocyte | 6.24e-12 | 48 |
monopoietic cell | 3.14e-11 | 59 |
monocyte | 3.14e-11 | 59 |
monoblast | 3.14e-11 | 59 |
promonocyte | 3.14e-11 | 59 |
granulocyte monocyte progenitor cell | 2.16e-09 | 67 |
myeloid leukocyte | 8.37e-08 | 72 |
myeloid lineage restricted progenitor cell | 2.33e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
embryo | 1.92e-14 | 592 |
developing anatomical structure | 1.02e-13 | 581 |
embryonic structure | 6.49e-12 | 564 |
germ layer | 1.54e-11 | 560 |
germ layer / neural crest | 1.54e-11 | 560 |
embryonic tissue | 1.54e-11 | 560 |
presumptive structure | 1.54e-11 | 560 |
germ layer / neural crest derived structure | 1.54e-11 | 560 |
epiblast (generic) | 1.54e-11 | 560 |
musculoskeletal system | 1.80e-09 | 167 |
skeletal system | 6.21e-09 | 100 |
skeletal element | 9.54e-09 | 90 |
bone marrow | 8.13e-08 | 76 |
bone element | 2.03e-07 | 82 |
immune system | 4.86e-07 | 93 |