FFCP PHASE1:Hg19::chr12:80084333..80084380,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5074 | |EntrezGene=5074 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8614 | |HGNC=8614 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000552637_5end | |association_with_transcript=0bp_to_ENST00000552637_5end | ||
|cluster_id=chr12:80084333..80084380,- | |||
|coexpression_cluster_id=C1688 | |||
|description=CAGE_peak_4_at_PAWR_5end | |description=CAGE_peak_4_at_PAWR_5end | ||
|id=chr12:80084333..80084380,- | |id=chr12:80084333..80084380,- | ||
|ontology_enrichment_celltype=CL:0000066!6.02e-28!254;CL:0000223!1.36e-07!59 | |ontology_enrichment_celltype=CL:0000066!6.02e-28!254;CL:0000223!1.36e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000945;8.46e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.31e-29,253;CL:0000223,4.09e-08,58;CL:0000945,8.53e-07,24;CL:0000826,8.53e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0001041;3.72e-07;30 | |||
|ontology_enrichment_disease=DOID:305!2.80e-19!106;DOID:0050687!1.45e-18!143;DOID:162!6.01e-11!235;DOID:14566!6.13e-10!239 | |ontology_enrichment_disease=DOID:305!2.80e-19!106;DOID:0050687!1.45e-18!143;DOID:162!6.01e-11!235;DOID:14566!6.13e-10!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.85e-19,106;DOID:0050687,1.37e-18,143;DOID:162,1.16e-11,235;DOID:14566,1.43e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.67e-16!169;UBERON:0000925!3.67e-16!169;UBERON:0006595!3.67e-16!169;UBERON:0001007!5.61e-15!155;UBERON:0001555!5.61e-15!155;UBERON:0007026!5.61e-15!155;UBERON:0000466!1.20e-12!126;UBERON:0000464!1.25e-11!104;UBERON:0004921!4.83e-11!129;UBERON:0004185!4.83e-11!129;UBERON:0000077!3.55e-10!130;UBERON:0005177!1.84e-08!107;UBERON:0002553!4.46e-08!70;UBERON:0001048!4.48e-08!168;UBERON:0009569!4.68e-08!113;UBERON:0005911!7.15e-08!82;UBERON:0000481!7.24e-08!347;UBERON:0000477!1.46e-07!286;UBERON:0004111!3.28e-07!241;UBERON:0001041!8.67e-07!98;UBERON:0000475!9.56e-07!365 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.46e-14,160;UBERON:0000925,1.46e-14,160;UBERON:0006595,1.46e-14,160;UBERON:0001007,7.36e-14,145;UBERON:0001555,7.36e-14,145;UBERON:0007026,7.36e-14,145;UBERON:0004921,3.56e-10,118;UBERON:0005177,1.86e-09,101;UBERON:0009569,4.02e-08,112;UBERON:0005911,4.42e-08,82;UBERON:0002553,4.05e-07,61 | |||
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| ||
|short_description=p4@PAWR | |short_description=p4@PAWR | ||
}} | }} |
Latest revision as of 00:35, 25 September 2015
Short description: | p4@PAWR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PAWR_5end |
Coexpression cluster: | C1688_pancreatic_large_testicular_oral_extraskeletal_mesothelioma_small |
Association with transcript: | 0bp_to_ENST00000552637_5end |
EntrezGene: | PAWR |
HGNC: | 8614 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.31e-29 | 253 |
endodermal cell | 4.09e-08 | 58 |
lymphocyte of B lineage | 8.53e-07 | 24 |
pro-B cell | 8.53e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.46e-14 | 160 |
endoderm | 1.46e-14 | 160 |
presumptive endoderm | 1.46e-14 | 160 |
digestive system | 7.36e-14 | 145 |
digestive tract | 7.36e-14 | 145 |
primitive gut | 7.36e-14 | 145 |
subdivision of digestive tract | 3.56e-10 | 118 |
trunk region element | 1.86e-09 | 101 |
subdivision of trunk | 4.02e-08 | 112 |
endo-epithelium | 4.42e-08 | 82 |
anatomical cavity | 4.05e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.85e-19 | 106 |
cell type cancer | 1.37e-18 | 143 |
cancer | 1.16e-11 | 235 |
disease of cellular proliferation | 1.43e-10 | 239 |