FFCP PHASE1:Hg19::chr17:9549018..9549049,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124739 | |EntrezGene=124739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20072 | |HGNC=20072 | ||
|TSSclassifier=strong | |||
|UniProt=Q70EL4 | |UniProt=Q70EL4 | ||
|association_with_transcript=68bp_to_AJ583817_5end | |association_with_transcript=68bp_to_AJ583817_5end | ||
|cluster_id=chr17:9549018..9549049,+ | |||
|description=CAGE_peak_4_at_USP43_5end | |description=CAGE_peak_4_at_USP43_5end | ||
|id=chr17:9549018..9549049,+ | |id=chr17:9549018..9549049,+ | ||
|ontology_enrichment_celltype=CL:1000507!1.75e-07!12;CL:1000494!1.75e-07!12;CL:0000066!3.76e-07!254 | |ontology_enrichment_celltype=CL:1000507!1.75e-07!12;CL:1000494!1.75e-07!12;CL:0000066!3.76e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000239;6.90e-11;3!CL:1000615;6.90e-11;3!CL:0002306;6.90e-11;3!CL:1000507;3.09e-07;10!CL:1000494;3.09e-07;10!CL:1000497;3.52e-07;17!CL:0002518;3.52e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.67e-11,3;CL:1000615,7.67e-11,3;CL:0002306,7.67e-11,3;CL:1000507,2.81e-07,10;CL:1000494,2.81e-07,10;CL:1000497,3.77e-07,17;CL:0002518,3.77e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;3.05e-09;1!DOID:6193;8.65e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,3.06e-09,1;DOID:6193,1.32e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003075!8.85e-23!86;UBERON:0007284!8.85e-23!86;UBERON:0002346!5.49e-21!90;UBERON:0005743!1.30e-20!86;UBERON:0000033!2.13e-20!123;UBERON:0000153!4.07e-20!129;UBERON:0007811!4.07e-20!129;UBERON:0000955!1.03e-19!69;UBERON:0006238!1.03e-19!69;UBERON:0003056!1.42e-19!61;UBERON:0000064!1.47e-18!219;UBERON:0002616!2.30e-18!59;UBERON:0001017!3.34e-18!82;UBERON:0001869!3.83e-17!32;UBERON:0000073!3.99e-17!94;UBERON:0001016!3.99e-17!94;UBERON:0001049!5.62e-17!57;UBERON:0005068!5.62e-17!57;UBERON:0006241!5.62e-17!57;UBERON:0007135!5.62e-17!57;UBERON:0001893!6.58e-17!34;UBERON:0001950!5.10e-16!20;UBERON:0002791!6.73e-16!33;UBERON:0002619!9.77e-16!22;UBERON:0002020!2.32e-15!34;UBERON:0003528!2.32e-15!34;UBERON:0004121!2.95e-15!169;UBERON:0000956!1.78e-14!25;UBERON:0000203!1.78e-14!25;UBERON:0000924!2.02e-14!173;UBERON:0006601!2.02e-14!173;UBERON:0002780!1.01e-13!41;UBERON:0001890!1.01e-13!41;UBERON:0006240!1.01e-13!41;UBERON:0003080!3.42e-13!42;UBERON:0000062!1.17e-11!511;UBERON:0007625!5.64e-10!11;UBERON:0000481!1.17e-09!347;UBERON:0000200!1.21e-08!6;UBERON:0000475!1.26e-08!365;UBERON:0000970!2.30e-08!20;UBERON:0007023!4.12e-08!115;UBERON:0002104!8.93e-08!21;UBERON:0000019!1.30e-07!19;UBERON:0000047!1.30e-07!19;UBERON:0004088!1.30e-07!19;UBERON:0003072!1.30e-07!19;UBERON:0003071!1.30e-07!19;UBERON:0004128!1.30e-07!19;UBERON:0009773!1.75e-07!12;UBERON:0001231!1.75e-07!12;UBERON:0004810!1.75e-07!12;UBERON:0000477!4.71e-07!286;UBERON:0001872!5.59e-07!5;UBERON:0000020!9.23e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0000200;8.56e-31;6!UBERON:0001870;6.70e-23;3!UBERON:0001950;1.60e-21;20!UBERON:0002619;1.47e-19;22!UBERON:0000956;3.51e-17;25!UBERON:0000203;3.51e-17;25!UBERON:0002702;7.25e-16;2!UBERON:0001869;1.25e-15;32!UBERON:0001893;1.65e-14;34!UBERON:0002791;3.99e-12;32!UBERON:0003528;8.74e-12;34!UBERON:0002020;8.74e-12;34!UBERON:0006853;6.90e-11;3!UBERON:0007685;6.90e-11;3!UBERON:0004134;6.90e-11;3!UBERON:0002581;8.65e-09;1!UBERON:0002022;8.65e-09;1!UBERON:0003112;8.65e-09;1!UBERON:0011158;8.65e-09;1!UBERON:0007190;8.65e-09;1!UBERON:0003128;8.65e-09;1!UBERON:0001703;8.65e-09;1!UBERON:0002241;8.65e-09;1!UBERON:0002780;3.75e-08;41!UBERON:0001890;3.75e-08;41!UBERON:0004211;3.09e-07;10!UBERON:0009773;3.09e-07;10!UBERON:0001231;3.09e-07;10!UBERON:0004810;3.09e-07;10!UBERON:0001872;7.24e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,8.45e-31,6;UBERON:0001870,6.07e-23,3;UBERON:0001950,9.31e-22,20;UBERON:0002619,8.96e-20,22;UBERON:0000956,2.28e-17,25;UBERON:0000203,2.28e-17,25;UBERON:0001869,5.84e-17,32;UBERON:0001893,6.51e-16,34;UBERON:0002702,7.88e-16,2;UBERON:0002791,1.87e-13,32;UBERON:0002780,4.94e-13,41;UBERON:0001890,4.94e-13,41;UBERON:0003080,4.94e-13,41;UBERON:0006240,4.94e-13,41;UBERON:0003056,1.15e-12,61;UBERON:0003528,1.27e-12,34;UBERON:0002020,1.27e-12,34;UBERON:0001049,1.97e-11,56;UBERON:0005068,1.97e-11,56;UBERON:0006241,1.97e-11,56;UBERON:0007135,1.97e-11,56;UBERON:0006853,7.67e-11,3;UBERON:0007685,7.67e-11,3;UBERON:0004134,7.67e-11,3;UBERON:0003075,8.83e-11,82;UBERON:0007284,8.83e-11,82;UBERON:0002346,3.46e-10,86;UBERON:0000073,7.84e-10,53;UBERON:0002616,7.84e-10,53;UBERON:0010314,8.69e-10,132;UBERON:0010371,1.24e-09,104;UBERON:0002022,4.19e-09,1;UBERON:0000955,5.63e-09,68;UBERON:0006238,5.63e-09,68;UBERON:0003112,5.70e-09,1;UBERON:0011158,5.70e-09,1;UBERON:0003128,5.70e-09,1;UBERON:0001703,5.70e-09,1;UBERON:0002241,5.70e-09,1;UBERON:0004761,5.70e-09,1;UBERON:0009617,5.70e-09,1;UBERON:0001017,6.42e-09,81;UBERON:0007190,1.22e-08,1;UBERON:0002581,1.42e-08,1;UBERON:0001016,7.29e-08,89;UBERON:0004810,2.81e-07,10;UBERON:0001872,7.70e-07,5 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.369363174230364,0.612002073732759,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,1.33037638477538,0.87834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0,0,0,0,1.56449532329816,0,0,0,0,0.473227200159376,0.842923450390509,0,0.441175890929576,0,0.949082476444386,0,0.784885860501384,0,0,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0,0,0.100528972411631,0,0,0,1.44331342025273,0.463721619900307,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.560655421726804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0.902399225814824,0.385076685522074,0,1.46139224653261,0.73886140225013,0,0,0,0,0.270946437543853,0.501689773854853,1.01950509218015,0.831076008928724,1.56712328305525,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.330569830721956,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0.556543525114529,0.659215496907038,0,0,0,0,0,0,0,0.269605053441981,0,0.511572370226872,0,0,0,0.969332746095218,1.02044907978036,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.438770794307945,0.21787692703798,0.278847488557207,0.153900517007594,0.227884111694002,0.23056390438806,0,0.108647371922008,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.134802265961354,0,0,0,0.19566461893209,0,0.394584402849391,0,0.61214552326098,0.063186579628488,0.901940516486955,0.518440956986236,0.664653872707185,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,1.20390222730132,0.774050650312681,0.511625219603299,0.656923656425674,0.0969890164884194,0,0.451961481561065,0,0.19871461170299,1.39283751102933,0,0.160317640503067,0,0,0,0.229073192331831,0,0,0,0,0.135904206073614,0,0.203996435272644,0,0.600420288709789,0.547621515567972,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,1.70098758642469,0,0.0788057072991982,0.104909176269996,0.316801009558219,0.537862017998534,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.95242023843141,1.001527445652,0,0.221858103073705,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.322231671127465,0,0.796191777397232,0,0,0,0,0.192619830407303,0,1.30497145982606,0,0.694567422971502,0,0,0.617602894321944,0.219284049578707,0.353378291891762,0.192914038270915,0,0.256241518587947,0,0.303859956177382,0.691292180758654,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0.6124909547064,0.834979926253974,0,0.159633859057151,0.615349092722265,0.252071696221718,0.553258019713743,1.45328081068666,0,0,0.11796972334774,0.366857197043358,0,0,2.7614397042404,0,0,0,0,0.261906694481422,0,0,1.2156765231311,0.781078098613847,1.44680757550829,0.634158101939068,0.546974809018219,0,0,0,0.383287282918786,0,0,0,0.227662191351298,0.177404740325278,0,0,0.135939465953663,1.18390992413128,0.236387681767936,0,0.156986185701028,0,0,0,1.07963795609311,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0.4582137370881,1.24082554265728,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0,1.30812099855325,0,0,0.150962843566674,0,0,0,0,0,0,0,1.2679671827502,0,0,0,0,0.178553938605658,0,0,0,0.917458566809082,0,0,1.29183831362738,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0.0645889098360061,0,1.12131862580613,0,0,0,0,0,0,0,0,0,1.9307228228694,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.369363174230364,0.612002073732759,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,1.33037638477538,0.87834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0,0,0,0,1.56449532329816,0,0,0,0,0.473227200159376,0.842923450390509,0,0.441175890929576,0,0.949082476444386,0,0.784885860501384,0,0,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0,0,0.100528972411631,0,0,0,1.44331342025273,0.463721619900307,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.560655421726804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0.902399225814824,0.385076685522074,0,1.46139224653261,0.73886140225013,0,0,0,0,0.270946437543853,0.501689773854853,1.01950509218015,0.831076008928724,1.56712328305525,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.330569830721956,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0.556543525114529,0.659215496907038,0,0,0,0,0,0,0,0.269605053441981,0,0.511572370226872,0,0,0,0.969332746095218,1.02044907978036,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.438770794307945,0.21787692703798,0.278847488557207,0.153900517007594,0.227884111694002,0.23056390438806,0,0.108647371922008,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.134802265961354,0,0,0,0.19566461893209,0,0.394584402849391,0,0.61214552326098,0.063186579628488,0.901940516486955,0.518440956986236,0.664653872707185,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,1.20390222730132,0.774050650312681,0.511625219603299,0.656923656425674,0.0969890164884194,0,0.451961481561065,0,0.19871461170299,1.39283751102933,0,0.160317640503067,0,0,0,0.229073192331831,0,0,0,0,0.135904206073614,0,0.203996435272644,0,0.600420288709789,0.547621515567972,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,1.70098758642469,0,0.0788057072991982,0.104909176269996,0.316801009558219,0.537862017998534,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.95242023843141,1.001527445652,0,0.221858103073705,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.322231671127465,0,0.796191777397232,0,0,0,0,0.192619830407303,0,1.30497145982606,0,0.694567422971502,0,0,0.617602894321944,0.219284049578707,0.353378291891762,0.192914038270915,0,0.256241518587947,0,0.303859956177382,0.691292180758654,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0.6124909547064,0.834979926253974,0,0.159633859057151,0.615349092722265,0.252071696221718,0.553258019713743,1.45328081068666,0,0,0.11796972334774,0.366857197043358,0,0,2.7614397042404,0,0,0,0,0.261906694481422,0,0,1.2156765231311,0.781078098613847,1.44680757550829,0.634158101939068,0.546974809018219,0,0,0,0.383287282918786,0,0,0,0.227662191351298,0.177404740325278,0,0,0.135939465953663,1.18390992413128,0.236387681767936,0,0.156986185701028,0,0,0,1.07963795609311,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0.4582137370881,1.24082554265728,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0,1.30812099855325,0,0,0.150962843566674,0,0,0,0,0,0,0,1.2679671827502,0,0,0,0,0.178553938605658,0,0,0,0.917458566809082,0,0,1.29183831362738,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0.0645889098360061,0,1.12131862580613,0,0,0,0,0,0,0,0,0,1.9307228228694,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p4@USP43 | |short_description=p4@USP43 | ||
}} | }} |
Latest revision as of 17:00, 18 September 2015
Short description: | p4@USP43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_USP43_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_AJ583817_5end |
EntrezGene: | USP43 |
HGNC: | 20072 |
UniProt: | Q70EL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.67e-11 | 3 |
kidney cortex tubule cell | 7.67e-11 | 3 |
epithelial cell of proximal tubule | 7.67e-11 | 3 |
kidney tubule cell | 2.81e-07 | 10 |
nephron tubule epithelial cell | 2.81e-07 | 10 |
kidney cell | 3.77e-07 | 17 |
kidney epithelial cell | 3.77e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 3.06e-09 | 1 |
epithelioid sarcoma | 1.32e-08 | 1 |