FFCP PHASE1:Hg19::chr12:66218443..66218461,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8091 | |EntrezGene=8091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5009 | |HGNC=5009 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-129bp_to_ENST00000545998_5end | |association_with_transcript=-129bp_to_ENST00000545998_5end | ||
|cluster_id=chr12:66218443..66218461,+ | |||
|coexpression_cluster_id=C749 | |||
|description=CAGE_peak_8_at_HMGA2_5end | |description=CAGE_peak_8_at_HMGA2_5end | ||
|id=chr12:66218443..66218461,+ | |id=chr12:66218443..66218461,+ | ||
|ontology_enrichment_celltype=CL:0002321!1.28e-24!248;CL:0000220!1.06e-23!246;CL:0000055!3.56e-20!180;CL:0000012!6.32e-19!682;CL:0000548!6.64e-19!679;CL:0000004!6.64e-19!679;CL:0000255!6.64e-19!679;CL:0000066!2.79e-17!254;CL:0002371!3.97e-14!591;CL:0000144!9.50e-14!625;CL:0000003!1.06e-10!722;CL:0000183!3.14e-10!59;CL:0000680!6.88e-10!57;CL:0000056!6.88e-10!57;CL:0000355!6.88e-10!57;CL:0000222!1.13e-09!119;CL:0000223!2.00e-09!59;CL:0000393!2.59e-09!60;CL:0000211!2.59e-09!60;CL:0000187!8.48e-09!54;CL:0002076!1.00e-08!43;CL:0000057!5.52e-08!75;CL:0000192!1.68e-07!42;CL:0000514!1.68e-07!42 | |ontology_enrichment_celltype=CL:0002321!1.28e-24!248;CL:0000220!1.06e-23!246;CL:0000055!3.56e-20!180;CL:0000012!6.32e-19!682;CL:0000548!6.64e-19!679;CL:0000004!6.64e-19!679;CL:0000255!6.64e-19!679;CL:0000066!2.79e-17!254;CL:0002371!3.97e-14!591;CL:0000144!9.50e-14!625;CL:0000003!1.06e-10!722;CL:0000183!3.14e-10!59;CL:0000680!6.88e-10!57;CL:0000056!6.88e-10!57;CL:0000355!6.88e-10!57;CL:0000222!1.13e-09!119;CL:0000223!2.00e-09!59;CL:0000393!2.59e-09!60;CL:0000211!2.59e-09!60;CL:0000187!8.48e-09!54;CL:0002076!1.00e-08!43;CL:0000057!5.52e-08!75;CL:0000192!1.68e-07!42;CL:0000514!1.68e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:1000449;3.81e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.93e-18,250;CL:0000066,1.68e-13,253;CL:0000223,3.09e-08,58;CL:0000680,5.90e-08,58;CL:0000056,5.90e-08,58;CL:0000355,5.90e-08,58;CL:0000393,4.45e-07,61;CL:0000211,4.45e-07,61;CL:0002076,5.75e-07,42;CL:1000449,7.14e-07,15;CL:0000187,7.42e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.83e-14!143;UBERON:0000486!7.29e-13!82;UBERON:0002100!7.98e-13!216;UBERON:0000914!2.76e-12!83;UBERON:0002329!2.76e-12!83;UBERON:0003077!2.76e-12!83;UBERON:0003059!2.76e-12!83;UBERON:0007282!2.76e-12!83;UBERON:0009618!2.76e-12!83;UBERON:0007285!2.76e-12!83;UBERON:0003104!3.01e-12!238;UBERON:0009142!3.01e-12!238;UBERON:0000475!2.08e-11!365;UBERON:0000481!2.70e-11!347;UBERON:0002049!3.30e-11!79;UBERON:0007798!3.30e-11!79;UBERON:0000119!9.66e-11!312;UBERON:0003914!2.19e-10!118;UBERON:0004290!2.40e-10!70;UBERON:0000490!2.53e-10!138;UBERON:0000483!5.55e-10!309;UBERON:0001444!1.52e-08!48;UBERON:0005085!1.72e-08!29;UBERON:0000468!3.30e-08!659;UBERON:0000019!4.38e-08!19;UBERON:0000047!4.38e-08!19;UBERON:0004088!4.38e-08!19;UBERON:0003072!4.38e-08!19;UBERON:0003071!4.38e-08!19;UBERON:0004128!4.38e-08!19;UBERON:0001134!4.44e-08!61;UBERON:0002036!4.44e-08!61;UBERON:0003082!4.44e-08!61;UBERON:0003102!6.43e-08!95;UBERON:0000970!9.46e-08!20;UBERON:0001981!1.03e-07!60;UBERON:0007500!1.03e-07!60;UBERON:0004537!1.03e-07!60;UBERON:0006965!1.03e-07!60;UBERON:0000055!1.16e-07!69;UBERON:0002385!1.39e-07!63;UBERON:0001015!1.39e-07!63;UBERON:0000383!1.39e-07!63;UBERON:0001456!3.23e-07!21;UBERON:0000922!5.36e-07!612;UBERON:0002104!5.58e-07!21;UBERON:0001801!9.74e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000019;2.59e-09;19!UBERON:0000047;2.59e-09;19!UBERON:0004088;2.59e-09;19!UBERON:0010230;2.59e-09;19!UBERON:0001456;1.44e-08;21!UBERON:0000970;1.65e-08;20!UBERON:0002104;8.64e-08;21!UBERON:0001801;1.34e-07;14!UBERON:0000020;3.09e-07;23!UBERON:0006555;3.81e-07;15!UBERON:0004819;3.81e-07;15!UBERON:0001285;3.81e-07;15!UBERON:0007684;3.81e-07;15!UBERON:0007625;3.84e-07;11!UBERON:0001444;7.05e-07;48 | |||
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| ||
|short_description=p8@HMGA2 | |short_description=p8@HMGA2 | ||
}} | }} |
Latest revision as of 23:25, 19 September 2015
Short description: | p8@HMGA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_HMGA2_5end |
Coexpression cluster: | C749_Wilms_rhabdomyosarcoma_medulloblastoma_fibrous_retinoblastoma_endometrial_schwannoma |
Association with transcript: | -129bp_to_ENST00000545998_5end |
EntrezGene: | HMGA2 |
HGNC: | 5009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.93e-18 | 250 |
epithelial cell | 1.68e-13 | 253 |
endodermal cell | 3.09e-08 | 58 |
muscle precursor cell | 5.90e-08 | 58 |
myoblast | 5.90e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.90e-08 | 58 |
electrically responsive cell | 4.45e-07 | 61 |
electrically active cell | 4.45e-07 | 61 |
endo-epithelial cell | 5.75e-07 | 42 |
epithelial cell of nephron | 7.14e-07 | 15 |
muscle cell | 7.42e-07 | 55 |