FFCP PHASE1:Hg19::chr12:6233828..6233843,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7450 | |EntrezGene=7450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12726 | |HGNC=12726 | ||
|TSSclassifier=strong | |||
|UniProt=P04275,Q8TCE8 | |UniProt=P04275,Q8TCE8 | ||
|association_with_transcript=0bp_to_ENST00000261405,ENST00000321023,ENST00000538563,ENST00000540192,ENST00000545906,NM_000552,uc001qnn.1,uc001qno.1,uc010set.1_5end | |association_with_transcript=0bp_to_ENST00000261405,ENST00000321023,ENST00000538563,ENST00000540192,ENST00000545906,NM_000552,uc001qnn.1,uc001qno.1,uc010set.1_5end | ||
|cluster_id=chr12:6233828..6233843,- | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_1_at_VWF_5end | |description=CAGE_peak_1_at_VWF_5end | ||
|id=chr12:6233828..6233843,- | |id=chr12:6233828..6233843,- | ||
|ontology_enrichment_celltype=CL:0002139!2.93e-28!24;CL:0000115!2.39e-27!35;CL:0000071!1.97e-21!18;CL:0002546!1.97e-21!18;CL:0002078!2.75e-20!44;CL:0000213!9.58e-14!57;CL:0000215!9.58e-14!57;CL:1000413!3.02e-11!9;CL:0005020!2.27e-08!6;CL:0002138!2.27e-08!6;CL:0005022!2.27e-08!6;CL:0002543!2.36e-08!6;CL:0002544!5.19e-08!6 | |ontology_enrichment_celltype=CL:0002139!2.93e-28!24;CL:0000115!2.39e-27!35;CL:0000071!1.97e-21!18;CL:0002546!1.97e-21!18;CL:0002078!2.75e-20!44;CL:0000213!9.58e-14!57;CL:0000215!9.58e-14!57;CL:1000413!3.02e-11!9;CL:0005020!2.27e-08!6;CL:0002138!2.27e-08!6;CL:0005022!2.27e-08!6;CL:0002543!2.36e-08!6;CL:0002544!5.19e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.74e-31;24!CL:0000115;2.12e-26;36!CL:0000071;1.39e-23;18!CL:0002078;1.18e-14;45!CL:1000413;2.69e-12;9!CL:0000213;4.66e-10;58!CL:0000215;4.66e-10;58!CL:0002138;4.21e-09;6!CL:0002543;4.35e-09;6!CL:0002544;1.03e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.68e-31,36;CL:0002139,3.77e-31,24;CL:0000071,1.41e-23,18;CL:0002546,1.41e-23,18;CL:0002078,1.04e-22,45;CL:0000213,5.12e-15,58;CL:0000215,5.12e-15,58;CL:1000413,2.73e-12,9;CL:0005020,4.18e-09,6;CL:0002138,4.18e-09,6;CL:0005022,4.18e-09,6;CL:0002543,4.35e-09,6;CL:0002544,1.04e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.39e-23;18!UBERON:0006601;3.54e-10;82!CL:0005022;4.21e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.82e-72!115;UBERON:0004111!1.19e-31!241;UBERON:0001049!6.27e-30!57;UBERON:0005068!6.27e-30!57;UBERON:0006241!6.27e-30!57;UBERON:0007135!6.27e-30!57;UBERON:0000477!1.99e-28!286;UBERON:0000025!3.31e-28!194;UBERON:0003080!2.79e-24!42;UBERON:0002616!3.69e-24!59;UBERON:0002780!2.73e-23!41;UBERON:0001890!2.73e-23!41;UBERON:0006240!2.73e-23!41;UBERON:0003075!1.48e-22!86;UBERON:0007284!1.48e-22!86;UBERON:0001017!3.44e-22!82;UBERON:0005743!1.52e-21!86;UBERON:0001986!1.97e-21!18;UBERON:0004638!1.97e-21!18;UBERON:0004852!1.97e-21!18;UBERON:0000955!3.42e-21!69;UBERON:0006238!3.42e-21!69;UBERON:0002346!1.00e-20!90;UBERON:0000073!1.36e-19!94;UBERON:0001016!1.36e-19!94;UBERON:0002020!4.19e-19!34;UBERON:0003528!4.19e-19!34;UBERON:0001893!6.65e-19!34;UBERON:0002791!2.49e-18!33;UBERON:0001869!1.84e-17!32;UBERON:0000483!2.94e-16!309;UBERON:0000487!3.54e-16!22;UBERON:0000119!8.90e-16!312;UBERON:0002619!1.90e-15!22;UBERON:0003056!8.02e-15!61;UBERON:0006914!1.42e-14!25;UBERON:0001950!4.48e-14!20;UBERON:0000956!7.64e-13!25;UBERON:0000203!7.64e-13!25;UBERON:0000153!3.45e-12!129;UBERON:0007811!3.45e-12!129;UBERON:0000055!7.47e-12!69;UBERON:0000468!1.34e-11!659;UBERON:0000467!2.16e-11!625;UBERON:0000480!2.71e-11!626;UBERON:0003915!3.02e-11!9;UBERON:0004700!3.02e-11!9;UBERON:0001917!3.02e-11!9;UBERON:0000033!4.30e-11!123;UBERON:0004121!6.61e-11!169;UBERON:0000924!3.20e-10!173;UBERON:0006601!3.20e-10!173;UBERON:0004872!1.41e-09!84;UBERON:0002049!1.93e-09!79;UBERON:0007798!1.93e-09!79;UBERON:0001009!4.87e-09!113;UBERON:0000064!7.93e-09!219;UBERON:0002465!1.19e-08!10;UBERON:0003914!3.41e-08!118;UBERON:0001981!3.78e-08!60;UBERON:0007500!3.78e-08!60;UBERON:0004537!3.78e-08!60;UBERON:0006965!3.78e-08!60;UBERON:0002308!5.85e-08!9;UBERON:0000125!5.85e-08!9;UBERON:0000922!7.53e-08!612;UBERON:0002420!8.45e-08!9;UBERON:0007245!8.45e-08!9;UBERON:0010009!8.45e-08!9;UBERON:0010011!8.45e-08!9;UBERON:0000454!8.45e-08!9;UBERON:0002298!1.02e-07!8;UBERON:0004535!1.41e-07!110;UBERON:0001473!2.41e-07!8;UBERON:0004536!2.41e-07!8;UBERON:0006558!2.41e-07!8;UBERON:0002050!2.45e-07!605;UBERON:0005423!2.45e-07!605;UBERON:0000481!4.56e-07!347;UBERON:0003103!4.70e-07!69;UBERON:0000923!5.25e-07!604;UBERON:0005291!5.25e-07!604;UBERON:0006598!5.25e-07!604;UBERON:0002532!5.25e-07!604;UBERON:0003076!6.15e-07!15;UBERON:0003057!6.15e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!1.82e-72!115;UBERON:0004111!1.19e-31!241;UBERON:0001049!6.27e-30!57;UBERON:0005068!6.27e-30!57;UBERON:0006241!6.27e-30!57;UBERON:0007135!6.27e-30!57;UBERON:0000477!1.99e-28!286;UBERON:0000025!3.31e-28!194;UBERON:0003080!2.79e-24!42;UBERON:0002616!3.69e-24!59;UBERON:0002780!2.73e-23!41;UBERON:0001890!2.73e-23!41;UBERON:0006240!2.73e-23!41;UBERON:0003075!1.48e-22!86;UBERON:0007284!1.48e-22!86;UBERON:0001017!3.44e-22!82;UBERON:0005743!1.52e-21!86;UBERON:0001986!1.97e-21!18;UBERON:0004638!1.97e-21!18;UBERON:0004852!1.97e-21!18;UBERON:0000955!3.42e-21!69;UBERON:0006238!3.42e-21!69;UBERON:0002346!1.00e-20!90;UBERON:0000073!1.36e-19!94;UBERON:0001016!1.36e-19!94;UBERON:0002020!4.19e-19!34;UBERON:0003528!4.19e-19!34;UBERON:0001893!6.65e-19!34;UBERON:0002791!2.49e-18!33;UBERON:0001869!1.84e-17!32;UBERON:0000483!2.94e-16!309;UBERON:0000487!3.54e-16!22;UBERON:0000119!8.90e-16!312;UBERON:0002619!1.90e-15!22;UBERON:0003056!8.02e-15!61;UBERON:0006914!1.42e-14!25;UBERON:0001950!4.48e-14!20;UBERON:0000956!7.64e-13!25;UBERON:0000203!7.64e-13!25;UBERON:0000153!3.45e-12!129;UBERON:0007811!3.45e-12!129;UBERON:0000055!7.47e-12!69;UBERON:0000468!1.34e-11!659;UBERON:0000467!2.16e-11!625;UBERON:0000480!2.71e-11!626;UBERON:0003915!3.02e-11!9;UBERON:0004700!3.02e-11!9;UBERON:0001917!3.02e-11!9;UBERON:0000033!4.30e-11!123;UBERON:0004121!6.61e-11!169;UBERON:0000924!3.20e-10!173;UBERON:0006601!3.20e-10!173;UBERON:0004872!1.41e-09!84;UBERON:0002049!1.93e-09!79;UBERON:0007798!1.93e-09!79;UBERON:0001009!4.87e-09!113;UBERON:0000064!7.93e-09!219;UBERON:0002465!1.19e-08!10;UBERON:0003914!3.41e-08!118;UBERON:0001981!3.78e-08!60;UBERON:0007500!3.78e-08!60;UBERON:0004537!3.78e-08!60;UBERON:0006965!3.78e-08!60;UBERON:0002308!5.85e-08!9;UBERON:0000125!5.85e-08!9;UBERON:0000922!7.53e-08!612;UBERON:0002420!8.45e-08!9;UBERON:0007245!8.45e-08!9;UBERON:0010009!8.45e-08!9;UBERON:0010011!8.45e-08!9;UBERON:0000454!8.45e-08!9;UBERON:0002298!1.02e-07!8;UBERON:0004535!1.41e-07!110;UBERON:0001473!2.41e-07!8;UBERON:0004536!2.41e-07!8;UBERON:0006558!2.41e-07!8;UBERON:0002050!2.45e-07!605;UBERON:0005423!2.45e-07!605;UBERON:0000481!4.56e-07!347;UBERON:0003103!4.70e-07!69;UBERON:0000923!5.25e-07!604;UBERON:0005291!5.25e-07!604;UBERON:0006598!5.25e-07!604;UBERON:0002532!5.25e-07!604;UBERON:0003076!6.15e-07!15;UBERON:0003057!6.15e-07!15 | ||
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| ||
|short_description=p1@VWF | |short_description=p1@VWF | ||
}} | }} |
Latest revision as of 17:56, 19 September 2015
Short description: | p1@VWF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VWF_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | 0bp_to_ENST00000261405, ENST00000321023, ENST00000538563, ENST00000540192, ENST00000545906, NM_000552, uc001qnn.1, uc001qno.1, uc010set.1_5end |
EntrezGene: | VWF |
HGNC: | 12726 |
UniProt: | P04275Q8TCE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.68e-31 | 36 |
endothelial cell of vascular tree | 3.77e-31 | 24 |
blood vessel endothelial cell | 1.41e-23 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.41e-23 | 18 |
meso-epithelial cell | 1.04e-22 | 45 |
lining cell | 5.12e-15 | 58 |
barrier cell | 5.12e-15 | 58 |
endothelial cell of artery | 2.73e-12 | 9 |
lymphangioblast | 4.18e-09 | 6 |
endothelial cell of lymphatic vessel | 4.18e-09 | 6 |
vascular lymphangioblast | 4.18e-09 | 6 |
vein endothelial cell | 4.35e-09 | 6 |
aortic endothelial cell | 1.04e-08 | 6 |