FFCP PHASE1:Hg19::chr10:98945821..98945840,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:98945821..98945840,-
|short_description=p4@SLIT1
|description=CAGE_peak_4_at_SLIT1_5end
|association_with_transcript=-138bp_to_ENST00000371054,ENST0000037...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6585 | |EntrezGene=6585 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11085 | |HGNC=11085 | ||
|UniProt=Q5T0V3, | |TSSclassifier=strong | ||
|UniProt=Q5T0V3,E7EWQ8,A6H8V1,O75093,Q5T0V1,Q5T0V4 | |||
|association_with_transcript=-138bp_to_ENST00000371054,ENST00000371057,NM_003061,uc001kmw.2,uc001kmz.2,uc009xvh.1_5end | |||
|cluster_id=chr10:98945821..98945840,- | |||
|description=CAGE_peak_4_at_SLIT1_5end | |||
|id=chr10:98945821..98945840,- | |||
|ontology_enrichment_celltype=CL:0002322!8.05e-11!5;CL:0000047!3.56e-09!8;CL:0000540!8.33e-09!6;CL:0000031!8.33e-09!6;CL:0000404!8.33e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000123;6.05e-10;2!CL:0000242;6.05e-10;2!CL:0002322;1.19e-07;5!CL:0000540;9.97e-07;6!CL:0000404;9.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.93e-10,2;CL:0000047,2.14e-08,8;CL:0002322,9.96e-08,5;CL:0000133,2.74e-07,59;CL:0000540,8.25e-07,6;CL:0000031,8.25e-07,6;CL:0000404,8.25e-07,6;CL:0002319,9.48e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.03e-07;82!CL:0000031;9.97e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.61e-48!82;UBERON:0000073!2.62e-48!94;UBERON:0001016!2.62e-48!94;UBERON:0005743!1.11e-47!86;UBERON:0002780!8.67e-42!41;UBERON:0001890!8.67e-42!41;UBERON:0006240!8.67e-42!41;UBERON:0001049!1.20e-40!57;UBERON:0005068!1.20e-40!57;UBERON:0006241!1.20e-40!57;UBERON:0007135!1.20e-40!57;UBERON:0003080!1.37e-40!42;UBERON:0000955!7.60e-38!69;UBERON:0006238!7.60e-38!69;UBERON:0002616!1.49e-36!59;UBERON:0001893!2.62e-36!34;UBERON:0002020!5.26e-36!34;UBERON:0003528!5.26e-36!34;UBERON:0001869!5.70e-36!32;UBERON:0002791!2.22e-34!33;UBERON:0002619!3.26e-34!22;UBERON:0001950!2.89e-30!20;UBERON:0003075!1.33e-29!86;UBERON:0007284!1.33e-29!86;UBERON:0000956!1.51e-29!25;UBERON:0000203!1.51e-29!25;UBERON:0003056!8.11e-29!61;UBERON:0002346!9.00e-28!90;UBERON:0004121!3.42e-24!169;UBERON:0000924!2.73e-23!173;UBERON:0006601!2.73e-23!173;UBERON:0000153!4.56e-22!129;UBERON:0007811!4.56e-22!129;UBERON:0000033!8.49e-20!123;UBERON:0007023!2.31e-18!115;UBERON:0000200!9.33e-13!6;UBERON:0001872!2.16e-11!5;UBERON:0001871!1.06e-09!7;UBERON:0000369!3.81e-09!4;UBERON:0002435!3.81e-09!4;UBERON:0000204!3.81e-09!4;UBERON:0010082!3.81e-09!4;UBERON:0000025!4.02e-09!194;UBERON:0002308!4.84e-08!9;UBERON:0000125!4.84e-08!9;UBERON:0000349!1.24e-07!5;UBERON:0002021!3.95e-07!5;UBERON:0005383!4.02e-07!3;UBERON:0005382!4.02e-07!3;UBERON:0002771!4.96e-07!3;UBERON:0001894!7.16e-07!7;UBERON:0006222!7.16e-07!7;UBERON:0000483!7.23e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.74e-42;22!UBERON:0001869;6.02e-37;32!UBERON:0000956;9.31e-37;25!UBERON:0000203;9.31e-37;25!UBERON:0001950;2.55e-35;20!UBERON:0001893;5.70e-34;34!UBERON:0002791;1.23e-32;32!UBERON:0003528;1.90e-31;34!UBERON:0002020;1.90e-31;34!UBERON:0002780;7.53e-25;41!UBERON:0001890;7.53e-25;41!UBERON:0001872;2.60e-20;5!UBERON:0000073;5.62e-15;53!UBERON:0002616;5.62e-15;53!UBERON:0000349;2.67e-13;5!UBERON:0001016;7.99e-12;83!UBERON:0000955;2.89e-11;68!UBERON:0001017;3.42e-11;75!UBERON:0000200;6.54e-11;6!UBERON:0002370;8.37e-10;2!UBERON:0005058;8.37e-10;2!UBERON:0009113;8.37e-10;2!UBERON:0001871;9.02e-10;6!UBERON:0001954;3.75e-09;2!UBERON:0003022;3.75e-09;2!UBERON:0002421;3.75e-09;2!UBERON:0002600;3.75e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,6.83e-42,22;UBERON:0001869,2.27e-40,32;UBERON:0001893,8.50e-38,34;UBERON:0000956,1.28e-36,25;UBERON:0000203,1.28e-36,25;UBERON:0002791,6.11e-36,32;UBERON:0001950,4.41e-35,20;UBERON:0002780,3.86e-34,41;UBERON:0001890,3.86e-34,41;UBERON:0003080,3.86e-34,41;UBERON:0006240,3.86e-34,41;UBERON:0003528,1.23e-33,34;UBERON:0002020,1.23e-33,34;UBERON:0001016,4.65e-33,89;UBERON:0001017,5.13e-32,81;UBERON:0000955,1.74e-25,68;UBERON:0006238,1.74e-25,68;UBERON:0000073,1.81e-25,53;UBERON:0002616,1.81e-25,53;UBERON:0001049,7.13e-24,56;UBERON:0005068,7.13e-24,56;UBERON:0006241,7.13e-24,56;UBERON:0007135,7.13e-24,56;UBERON:0003056,1.47e-21,61;UBERON:0001872,4.35e-20,5;UBERON:0004121,8.17e-17,171;UBERON:0000924,8.17e-17,171;UBERON:0006601,8.17e-17,171;UBERON:0003075,6.69e-15,82;UBERON:0007284,6.69e-15,82;UBERON:0011216,2.20e-14,223;UBERON:0002346,5.32e-14,86;UBERON:0010371,1.11e-13,104;UBERON:0000349,2.35e-13,5;UBERON:0000200,7.39e-11,6;UBERON:0007023,1.25e-10,114;UBERON:0001871,8.94e-10,6;UBERON:0001954,2.75e-09,2;UBERON:0003022,2.75e-09,2;UBERON:0002421,2.75e-09,2;UBERON:0002600,2.75e-09,2;UBERON:0010314,1.37e-08,132 | |||
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| ||
|short_description=p4@SLIT1 | |||
}} | }} |
Latest revision as of 06:11, 20 September 2015
Short description: | p4@SLIT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLIT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -138bp_to_ENST00000371054, ENST00000371057, NM_003061, uc001kmw.2, uc001kmz.2, uc009xvh.1_5end |
EntrezGene: | SLIT1 |
HGNC: | 11085 |
UniProt: | Q5T0V3E7EWQ8A6H8V1O75093Q5T0V1Q5T0V4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.93e-10 | 2 |
neuronal stem cell | 2.14e-08 | 8 |
embryonic stem cell | 9.96e-08 | 5 |
neurectodermal cell | 2.74e-07 | 59 |
neuron | 8.25e-07 | 6 |
neuroblast | 8.25e-07 | 6 |
electrically signaling cell | 8.25e-07 | 6 |
neural cell | 9.48e-07 | 25 |