FFCP PHASE1:Hg19::chr12:56912838..56912839,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:56912838..56912839,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr12:56912838..56912839,+ | |description=CAGE_peak_at_chr12:56912838..56912839,+ | ||
|id=chr12:56912838..56912839,+ | |id=chr12:56912838..56912839,+ | ||
|ontology_enrichment_celltype=CL:0002541!3.07e-34!3;CL:0002537!7.81e-21!5;CL:0002588!5.41e-07!2 | |ontology_enrichment_celltype=CL:0002541!3.07e-34!3;CL:0002537!7.81e-21!5;CL:0002588!5.41e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.37e-22;19!CL:0002537;4.21e-21;5!CL:0002569;9.07e-18;6!CL:0000723;8.54e-09;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.37e-22,19;CL:0002537,4.21e-21,5;CL:0002569,9.07e-18,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.73e-38!14;UBERON:0000158!1.73e-38!14;UBERON:0000476!3.07e-34!3;UBERON:0000920!3.07e-34!3;UBERON:0000478!4.98e-29!24;UBERON:0003124!7.66e-26!7;UBERON:0001737!8.99e-20!9;UBERON:0000305!4.58e-15!7;UBERON:0004871!2.95e-13!8;UBERON:0004923!1.25e-11!57;UBERON:0001557!1.67e-09!19 | |ontology_enrichment_uberon=UBERON:0005631!1.73e-38!14;UBERON:0000158!1.73e-38!14;UBERON:0000476!3.07e-34!3;UBERON:0000920!3.07e-34!3;UBERON:0000478!4.98e-29!24;UBERON:0003124!7.66e-26!7;UBERON:0001737!8.99e-20!9;UBERON:0000305!4.58e-15!7;UBERON:0004871!2.95e-13!8;UBERON:0004923!1.25e-11!57;UBERON:0001557!1.67e-09!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0003422;9.07e-18;6!UBERON:0000478;1.03e-17;24!UBERON:0000305;1.65e-15;7!UBERON:0003104;1.91e-15;7!UBERON:0009142;1.91e-15;7!UBERON:0005631;2.73e-11;10!UBERON:0000158;2.73e-11;10!UBERON:0002331;3.02e-11;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,9.07e-18,6;UBERON:0000478,1.03e-17,24;UBERON:0000305,1.65e-15,7;UBERON:0004871,9.39e-14,8;UBERON:0002331,3.02e-11,10;UBERON:0000358,3.02e-11,10;UBERON:0000307,3.02e-11,10;UBERON:0000091,3.02e-11,10;UBERON:0000087,3.02e-11,10;UBERON:0007010,3.02e-11,10;UBERON:0007806,3.02e-11,10;UBERON:0008780,3.02e-11,10;UBERON:0005728,3.02e-11,10;UBERON:0005631,1.86e-08,14;UBERON:0000158,1.86e-08,14 | |||
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|short_description=p@chr12:56912838..56912839,+ | |short_description=p@chr12:56912838..56912839,+ | ||
}} | }} |
Latest revision as of 10:30, 24 July 2015
Short description: | p@chr12:56912838..56912839, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56912838..56912839, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.37e-22 | 19 |
amnion mesenchymal stem cell | 4.21e-21 | 5 |
mesenchymal stem cell of umbilical cord | 9.07e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 9.07e-18 | 6 |
extraembryonic structure | 1.03e-17 | 24 |
amnion | 1.65e-15 | 7 |
somatic layer of lateral plate mesoderm | 9.39e-14 | 8 |
umbilical cord | 3.02e-11 | 10 |
blastocyst | 3.02e-11 | 10 |
blastula | 3.02e-11 | 10 |
bilaminar disc | 3.02e-11 | 10 |
inner cell mass | 3.02e-11 | 10 |
cleaving embryo | 3.02e-11 | 10 |
connecting stalk | 3.02e-11 | 10 |
inner cell mass derived epiblast | 3.02e-11 | 10 |
extraembryonic mesoderm | 3.02e-11 | 10 |
extraembryonic membrane | 1.86e-08 | 14 |
membranous layer | 1.86e-08 | 14 |