FFCP PHASE1:Hg19::chr12:56498312..56498413,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5036 | |EntrezGene=5036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8550 | |HGNC=8550 | ||
|TSSclassifier=strong | |||
|UniProt=F8VTY8,F8VRZ3,F8VR77 | |UniProt=F8VTY8,F8VRZ3,F8VR77 | ||
|association_with_transcript=0bp_to_ENST00000417031,ENST00000546435,ENST00000548711,ENST00000552766_5end | |association_with_transcript=0bp_to_ENST00000417031,ENST00000546435,ENST00000548711,ENST00000552766_5end | ||
|cluster_id=chr12:56498312..56498413,+ | |||
|coexpression_cluster_id=C3300 | |||
|description=CAGE_peak_1_at_PA2G4_5end | |description=CAGE_peak_1_at_PA2G4_5end | ||
|id=chr12:56498312..56498413,+ | |id=chr12:56498312..56498413,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.97e-24!254;CL:0002321!1.09e-11!248;CL:0000220!1.56e-11!246;CL:0000076!2.77e-10!62;CL:0000548!5.10e-10!679;CL:0000004!5.10e-10!679;CL:0000255!5.10e-10!679;CL:0000012!7.80e-10!682 | |ontology_enrichment_celltype=CL:0000066!4.97e-24!254;CL:0002321!1.09e-11!248;CL:0000220!1.56e-11!246;CL:0000076!2.77e-10!62;CL:0000548!5.10e-10!679;CL:0000004!5.10e-10!679;CL:0000255!5.10e-10!679;CL:0000012!7.80e-10!682 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.97e-24,253;CL:0002321,8.83e-12,250;CL:0000076,7.69e-10,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.37e-28!235;DOID:14566!3.09e-27!239;DOID:2531!6.52e-18!51;DOID:0060083!6.52e-18!51;DOID:1240!1.01e-15!39;DOID:0050687!2.47e-14!143;DOID:0050686!2.74e-13!137;DOID:8692!3.00e-13!31;DOID:305!1.23e-12!106 | |ontology_enrichment_disease=DOID:162!1.37e-28!235;DOID:14566!3.09e-27!239;DOID:2531!6.52e-18!51;DOID:0060083!6.52e-18!51;DOID:1240!1.01e-15!39;DOID:0050687!2.47e-14!143;DOID:0050686!2.74e-13!137;DOID:8692!3.00e-13!31;DOID:305!1.23e-12!106 | ||
|ontology_enrichment_disease_v019=DOID:8692;6.56e-13;31!DOID:1240;1.52e-12;39!DOID:2531;1.71e-11;51!DOID:0060083;1.71e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.37e-28,235;DOID:14566,3.09e-27,239;DOID:2531,6.52e-18,51;DOID:0060083,6.52e-18,51;DOID:1240,1.01e-15,39;DOID:0050687,2.47e-14,143;DOID:0050686,2.74e-13,137;DOID:8692,3.00e-13,31;DOID:305,1.23e-12,106 | |||
|ontology_enrichment_uberon=UBERON:0003104!8.01e-10!238;UBERON:0009142!8.01e-10!238;UBERON:0000072!7.18e-08!46;UBERON:0008947!7.85e-08!38;UBERON:0003258!7.85e-08!38;UBERON:0005177!4.43e-07!107;UBERON:0000065!4.83e-07!53;UBERON:0001041!5.19e-07!98;UBERON:0001048!9.72e-07!168 | |ontology_enrichment_uberon=UBERON:0003104!8.01e-10!238;UBERON:0009142!8.01e-10!238;UBERON:0000072!7.18e-08!46;UBERON:0008947!7.85e-08!38;UBERON:0003258!7.85e-08!38;UBERON:0005177!4.43e-07!107;UBERON:0000065!4.83e-07!53;UBERON:0001041!5.19e-07!98;UBERON:0001048!9.72e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0000072;1.21e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.06e-08,101;UBERON:0008947,7.85e-08,38;UBERON:0003258,7.85e-08,38;UBERON:0000072,1.45e-07,47;UBERON:0000065,8.66e-07,54 | |||
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| ||
|short_description=p1@PA2G4 | |short_description=p1@PA2G4 | ||
}} | }} |
Latest revision as of 09:38, 19 September 2015
Short description: | p1@PA2G4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PA2G4_5end |
Coexpression cluster: | C3300_acute_lymphoma_chronic_giant_Fibroblast_hereditary_diffuse |
Association with transcript: | 0bp_to_ENST00000417031, ENST00000546435, ENST00000548711, ENST00000552766_5end |
EntrezGene: | PA2G4 |
HGNC: | 8550 |
UniProt: | F8VTY8F8VRZ3F8VR77 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.97e-24 | 253 |
embryonic cell | 8.83e-12 | 250 |
squamous epithelial cell | 7.69e-10 | 63 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.06e-08 | 101 |
respiratory primordium | 7.85e-08 | 38 |
endoderm of foregut | 7.85e-08 | 38 |
segment of respiratory tract | 1.45e-07 | 47 |
respiratory tract | 8.66e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.37e-28 | 235 |
disease of cellular proliferation | 3.09e-27 | 239 |
hematologic cancer | 6.52e-18 | 51 |
immune system cancer | 6.52e-18 | 51 |
leukemia | 1.01e-15 | 39 |
cell type cancer | 2.47e-14 | 143 |
organ system cancer | 2.74e-13 | 137 |
myeloid leukemia | 3.00e-13 | 31 |
carcinoma | 1.23e-12 | 106 |