FFCP PHASE1:Hg19::chr12:56360072..56360078,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1017 | |EntrezGene=1017 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1771 | |HGNC=1771 | ||
|TSSclassifier=strong | |||
|UniProt=P24941 | |UniProt=P24941 | ||
|association_with_transcript=-474bp_to_ENST00000266970_5end | |association_with_transcript=-474bp_to_ENST00000266970_5end | ||
|cluster_id=chr12:56360072..56360078,+ | |||
|coexpression_cluster_id=C122 | |||
|description=CAGE_peak_6_at_CDK2_5end | |description=CAGE_peak_6_at_CDK2_5end | ||
|id=chr12:56360072..56360078,+ | |id=chr12:56360072..56360078,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.11e-07!254 | |ontology_enrichment_celltype=CL:0000066!8.11e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000946;9.49e-11;1!CL:0000786;9.49e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,5.57e-11,1;CL:0000786,5.57e-11,1;CL:0000980,5.57e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.83e-40!235;DOID:14566!2.75e-38!239;DOID:0050687!5.91e-24!143;DOID:0050686!4.21e-23!137;DOID:305!1.32e-20!106;DOID:2531!9.21e-16!51;DOID:0060083!9.21e-16!51;DOID:299!6.03e-13!25;DOID:1240!1.11e-09!39;DOID:0060058!1.60e-08!10;DOID:1749!2.73e-08!14;DOID:7!3.49e-08!39;DOID:1036!9.92e-08!8 | |ontology_enrichment_disease=DOID:162!7.83e-40!235;DOID:14566!2.75e-38!239;DOID:0050687!5.91e-24!143;DOID:0050686!4.21e-23!137;DOID:305!1.32e-20!106;DOID:2531!9.21e-16!51;DOID:0060083!9.21e-16!51;DOID:299!6.03e-13!25;DOID:1240!1.11e-09!39;DOID:0060058!1.60e-08!10;DOID:1749!2.73e-08!14;DOID:7!3.49e-08!39;DOID:1036!9.92e-08!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.84e-19;8!DOID:8692;3.74e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.14e-19,8;DOID:0050686,1.54e-09,137;DOID:1240,1.43e-08,39;DOID:162,8.90e-08,235;DOID:8692,9.51e-08,31;DOID:14566,1.47e-07,239 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;9.49e-11;1!UBERON:0004913;9.49e-11;1!UBERON:0003703;9.49e-11;1!UBERON:0001174;9.49e-11;1!UBERON:0004914;9.49e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.33e-10,1;UBERON:0003703,1.33e-10,1;UBERON:0001174,1.33e-10,1;UBERON:0004914,1.33e-10,1;UBERON:0007195,1.61e-10,1 | |||
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| ||
|short_description=p6@CDK2 | |short_description=p6@CDK2 | ||
}} | }} |
Latest revision as of 09:14, 19 September 2015
Short description: | p6@CDK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CDK2_5end |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | -474bp_to_ENST00000266970_5end |
EntrezGene: | CDK2 |
HGNC: | 1771 |
UniProt: | P24941 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 5.57e-11 | 1 |
plasma cell | 5.57e-11 | 1 |
plasmablast | 5.57e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.33e-10 | 1 |
extrahepatic bile duct | 1.33e-10 | 1 |
common bile duct | 1.33e-10 | 1 |
duodenal papilla | 1.33e-10 | 1 |
stroma of bone marrow | 1.61e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.14e-19 | 8 |
organ system cancer | 1.54e-09 | 137 |
leukemia | 1.43e-08 | 39 |
cancer | 8.90e-08 | 235 |
myeloid leukemia | 9.51e-08 | 31 |
disease of cellular proliferation | 1.47e-07 | 239 |