FFCP PHASE1:Hg19::chr17:72620187..72620199,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=342510 | |EntrezGene=342510 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28874 | |HGNC=28874 | ||
|TSSclassifier=strong | |||
|UniProt=Q496F6,B4E0V9 | |UniProt=Q496F6,B4E0V9 | ||
|association_with_transcript=-290bp_to_ENST00000426295,NM_181449_5end | |association_with_transcript=-290bp_to_ENST00000426295,NM_181449_5end | ||
|cluster_id=chr17:72620187..72620199,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_CD300E_5end | |description=CAGE_peak_6_at_CD300E_5end | ||
|id=chr17:72620187..72620199,- | |id=chr17:72620187..72620199,- | ||
|ontology_enrichment_celltype=CL:0002057!4.91e-141!42;CL:0000860!3.22e-131!45;CL:0002194!6.43e-96!63;CL:0000576!6.43e-96!63;CL:0000040!6.43e-96!63;CL:0000559!6.43e-96!63;CL:0002009!8.07e-93!65;CL:0000839!7.78e-86!70;CL:0000557!1.48e-84!71;CL:0000766!2.16e-83!76;CL:0000763!9.10e-55!112;CL:0000049!9.10e-55!112;CL:0002087!3.71e-51!119;CL:0002031!5.71e-46!124;CL:0000738!3.17e-45!140;CL:0000037!1.23e-35!172;CL:0000566!1.23e-35!172;CL:0002032!3.48e-35!165;CL:0000837!3.48e-35!165;CL:0000988!2.51e-33!182;CL:0000134!1.20e-13!358;CL:0002320!2.97e-13!365;CL:0000219!7.30e-12!390;CL:0000048!3.39e-10!430;CL:0000723!5.85e-10!436;CL:0000034!1.19e-09!444;CL:0002393!2.87e-09!9;CL:0002397!2.87e-09!9 | |ontology_enrichment_celltype=CL:0002057!4.91e-141!42;CL:0000860!3.22e-131!45;CL:0002194!6.43e-96!63;CL:0000576!6.43e-96!63;CL:0000040!6.43e-96!63;CL:0000559!6.43e-96!63;CL:0002009!8.07e-93!65;CL:0000839!7.78e-86!70;CL:0000557!1.48e-84!71;CL:0000766!2.16e-83!76;CL:0000763!9.10e-55!112;CL:0000049!9.10e-55!112;CL:0002087!3.71e-51!119;CL:0002031!5.71e-46!124;CL:0000738!3.17e-45!140;CL:0000037!1.23e-35!172;CL:0000566!1.23e-35!172;CL:0002032!3.48e-35!165;CL:0000837!3.48e-35!165;CL:0000988!2.51e-33!182;CL:0000134!1.20e-13!358;CL:0002320!2.97e-13!365;CL:0000219!7.30e-12!390;CL:0000048!3.39e-10!430;CL:0000723!5.85e-10!436;CL:0000034!1.19e-09!444;CL:0002393!2.87e-09!9;CL:0002397!2.87e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.49e-113;33!CL:0002057;6.49e-113;33!CL:0000473;1.17e-79;39!CL:0000234;1.17e-79;39!CL:0000576;8.28e-54;48!CL:0000766;8.78e-25;69!CL:0000763;1.84e-18;100!CL:0002087;6.39e-17;104!CL:0000738;4.56e-11;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.25e-101,42;CL:0002057,4.25e-101,42;CL:0000473,3.98e-88,48;CL:0000234,3.98e-88,48;CL:0002194,5.89e-70,59;CL:0000576,5.89e-70,59;CL:0000040,5.89e-70,59;CL:0000559,5.89e-70,59;CL:0002009,1.31e-67,61;CL:0000839,2.33e-62,66;CL:0000557,2.12e-61,67;CL:0000766,5.28e-57,72;CL:0000763,3.11e-37,108;CL:0000049,3.11e-37,108;CL:0002087,8.22e-35,115;CL:0002031,2.98e-33,120;CL:0000738,5.04e-29,136;CL:0002032,4.40e-24,161;CL:0000837,4.40e-24,161;CL:0000037,5.84e-23,168;CL:0000988,1.21e-21,177;CL:0000134,2.93e-09,354;CL:0002320,5.13e-09,361;CL:0000219,3.71e-08,386;CL:0000048,4.21e-07,427;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.28e-78;42!CL:0000049;8.79e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.89e-74!80;UBERON:0001474!7.12e-69!86;UBERON:0002390!1.13e-60!102;UBERON:0003061!1.13e-60!102;UBERON:0004765!8.47e-58!101;UBERON:0001434!8.47e-58!101;UBERON:0002193!9.93e-55!112;UBERON:0002405!4.84e-50!115;UBERON:0002204!1.59e-32!167;UBERON:0003081!2.50e-25!216;UBERON:0002384!1.02e-12!375;UBERON:0000926!1.12e-08!448;UBERON:0004120!1.12e-08!448;UBERON:0006603!1.12e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.75e-54,76;UBERON:0001474,8.50e-50,82;UBERON:0004765,3.61e-45,90;UBERON:0002405,1.23e-43,93;UBERON:0002390,2.75e-41,98;UBERON:0003061,2.75e-41,98;UBERON:0001434,2.06e-40,100;UBERON:0002193,3.11e-37,108;UBERON:0002204,4.09e-23,167;UBERON:0003081,1.71e-18,203;UBERON:0000926,8.25e-11,315;UBERON:0004120,8.25e-11,315;UBERON:0006603,8.25e-11,315;UBERON:0002384,1.10e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0.257575567634187,5.08893835728477,1.13362783106643,0.242584061187816,3.71886459049095,0.411167888021826,1.23882548358041,2.3015391385772,0.256160706529101,1.41889337933151,5.86067657252252,4.51839278508678,2.70852973188684,4.32957380947991,1.63743690034707,2.02251136000576,10.1007684482398,4.17207735198922,4.47535988059329,1.31940520074686,1.39624560335142,0,3.19230162491442,0,0.622822248995575,2.00998932205395,1.5644487552606,0.434377689410233,1.21079900526674,1.10483290796269,0.949387162322653,0.422510572623884,0.425208599930087,0,0.561643155732475,0.450530678524519,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0.257575567634187,5.08893835728477,1.13362783106643,0.242584061187816,3.71886459049095,0.411167888021826,1.23882548358041,2.3015391385772,0.256160706529101,1.41889337933151,5.86067657252252,4.51839278508678,2.70852973188684,4.32957380947991,1.63743690034707,2.02251136000576,10.1007684482398,4.17207735198922,4.47535988059329,1.31940520074686,1.39624560335142,0,3.19230162491442,0,0.622822248995575,2.00998932205395,1.5644487552606,0.434377689410233,1.21079900526674,1.10483290796269,0.949387162322653,0.422510572623884,0.425208599930087,0,0.561643155732475,0.450530678524519,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@CD300E | |short_description=p6@CD300E | ||
}} | }} |
Latest revision as of 08:27, 17 September 2015
Short description: | p6@CD300E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CD300E_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -290bp_to_ENST00000426295, NM_181449_5end |
EntrezGene: | CD300E |
HGNC: | 28874 |
UniProt: | Q496F6B4E0V9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.25e-101 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.25e-101 | 42 |
defensive cell | 3.98e-88 | 48 |
phagocyte | 3.98e-88 | 48 |
monopoietic cell | 5.89e-70 | 59 |
monocyte | 5.89e-70 | 59 |
monoblast | 5.89e-70 | 59 |
promonocyte | 5.89e-70 | 59 |
macrophage dendritic cell progenitor | 1.31e-67 | 61 |
myeloid lineage restricted progenitor cell | 2.33e-62 | 66 |
granulocyte monocyte progenitor cell | 2.12e-61 | 67 |
myeloid leukocyte | 5.28e-57 | 72 |
myeloid cell | 3.11e-37 | 108 |
common myeloid progenitor | 3.11e-37 | 108 |
nongranular leukocyte | 8.22e-35 | 115 |
hematopoietic lineage restricted progenitor cell | 2.98e-33 | 120 |
leukocyte | 5.04e-29 | 136 |
hematopoietic oligopotent progenitor cell | 4.40e-24 | 161 |
hematopoietic multipotent progenitor cell | 4.40e-24 | 161 |
hematopoietic stem cell | 5.84e-23 | 168 |
hematopoietic cell | 1.21e-21 | 177 |
mesenchymal cell | 2.93e-09 | 354 |
connective tissue cell | 5.13e-09 | 361 |
motile cell | 3.71e-08 | 386 |
multi fate stem cell | 4.21e-07 | 427 |
somatic stem cell | 5.89e-07 | 433 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.75e-54 | 76 |
bone element | 8.50e-50 | 82 |
skeletal element | 3.61e-45 | 90 |
immune system | 1.23e-43 | 93 |
hematopoietic system | 2.75e-41 | 98 |
blood island | 2.75e-41 | 98 |
skeletal system | 2.06e-40 | 100 |
hemolymphoid system | 3.11e-37 | 108 |
musculoskeletal system | 4.09e-23 | 167 |
lateral plate mesoderm | 1.71e-18 | 203 |
mesoderm | 8.25e-11 | 315 |
mesoderm-derived structure | 8.25e-11 | 315 |
presumptive mesoderm | 8.25e-11 | 315 |
connective tissue | 1.10e-08 | 371 |