FFCP PHASE1:Hg19::chr12:54795616..54795632,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:54795616..54795632,- | |||
|description=CAGE_peak_at_chr12:54795616..54795632,- | |description=CAGE_peak_at_chr12:54795616..54795632,- | ||
|id=chr12:54795616..54795632,- | |id=chr12:54795616..54795632,- | ||
|ontology_enrichment_celltype=CL:0000048!3.69e-19!430;CL:0002371!7.52e-19!591;CL:0000723!7.81e-19!436;CL:0000034!9.38e-18!444;CL:0000144!1.29e-17!625;CL:0000222!5.71e-14!119;CL:0000548!1.26e-13!679;CL:0000004!1.26e-13!679;CL:0000255!1.26e-13!679;CL:0000055!3.79e-13!180;CL:0000012!4.25e-13!682;CL:0002057!3.22e-11!42;CL:0000057!1.46e-10!75;CL:0000860!1.54e-10!45;CL:0002320!4.99e-10!365;CL:0000680!9.22e-10!57;CL:0000056!9.22e-10!57;CL:0000355!9.22e-10!57;CL:0000134!1.42e-09!358;CL:0000183!2.61e-09!59;CL:0000115!7.56e-09!35;CL:0000003!9.70e-09!722;CL:0000187!1.14e-08!54;CL:0002139!2.53e-08!24;CL:0002194!1.18e-07!63;CL:0000576!1.18e-07!63;CL:0000040!1.18e-07!63;CL:0000559!1.18e-07!63;CL:0002078!1.24e-07!44;CL:0000393!1.80e-07!60;CL:0000211!1.80e-07!60;CL:0000071!4.12e-07!18;CL:0002546!4.12e-07!18;CL:0002009!5.34e-07!65;CL:0000219!7.89e-07!390;CL:0000192!9.80e-07!42;CL:0000514!9.80e-07!42 | |ontology_enrichment_celltype=CL:0000048!3.69e-19!430;CL:0002371!7.52e-19!591;CL:0000723!7.81e-19!436;CL:0000034!9.38e-18!444;CL:0000144!1.29e-17!625;CL:0000222!5.71e-14!119;CL:0000548!1.26e-13!679;CL:0000004!1.26e-13!679;CL:0000255!1.26e-13!679;CL:0000055!3.79e-13!180;CL:0000012!4.25e-13!682;CL:0002057!3.22e-11!42;CL:0000057!1.46e-10!75;CL:0000860!1.54e-10!45;CL:0002320!4.99e-10!365;CL:0000680!9.22e-10!57;CL:0000056!9.22e-10!57;CL:0000355!9.22e-10!57;CL:0000134!1.42e-09!358;CL:0000183!2.61e-09!59;CL:0000115!7.56e-09!35;CL:0000003!9.70e-09!722;CL:0000187!1.14e-08!54;CL:0002139!2.53e-08!24;CL:0002194!1.18e-07!63;CL:0000576!1.18e-07!63;CL:0000040!1.18e-07!63;CL:0000559!1.18e-07!63;CL:0002078!1.24e-07!44;CL:0000393!1.80e-07!60;CL:0000211!1.80e-07!60;CL:0000071!4.12e-07!18;CL:0002546!4.12e-07!18;CL:0002009!5.34e-07!65;CL:0000219!7.89e-07!390;CL:0000192!9.80e-07!42;CL:0000514!9.80e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.40e-23;33!CL:0002057;2.40e-23;33!CL:0000473;1.98e-16;39!CL:0000234;1.98e-16;39!CL:0000576;2.01e-10;48!CL:0000115;4.20e-10;36!CL:1000413;2.13e-09;9!CL:0002139;2.43e-08;24!CL:0000071;8.34e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.76e-18,42;CL:0002057,6.76e-18,42;CL:0000473,8.10e-15,48;CL:0000234,8.10e-15,48;CL:0000048,2.78e-12,427;CL:0000222,5.32e-12,121;CL:0000723,8.23e-12,433;CL:0002194,1.27e-11,59;CL:0000576,1.27e-11,59;CL:0000040,1.27e-11,59;CL:0000559,1.27e-11,59;CL:0000034,3.32e-11,441;CL:0002009,4.88e-11,61;CL:0000115,1.34e-10,36;CL:0000839,9.75e-10,66;CL:0000557,1.68e-09,67;CL:1000413,1.88e-09,9;CL:0000766,1.98e-08,72;CL:0000680,3.62e-08,58;CL:0000056,3.62e-08,58;CL:0000355,3.62e-08,58;CL:0002139,4.18e-08,24;CL:0002078,1.26e-07,45;CL:0000187,5.85e-07,55;CL:0000192,7.32e-07,43;CL:0000514,7.32e-07,43;CL:0000071,8.55e-07,18;CL:0002546,8.55e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;6.75e-15;42!CL:0002546;8.34e-07;18 | |||
|ontology_enrichment_disease=DOID:2394!9.10e-07!14 | |ontology_enrichment_disease=DOID:2394!9.10e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.66e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.11e-11,14;DOID:0060084,9.98e-07,3;DOID:127,9.98e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003081!5.19e-15!216;UBERON:0000055!2.19e-14!69;UBERON:0002049!3.66e-14!79;UBERON:0007798!3.66e-14!79;UBERON:0004872!5.85e-14!84;UBERON:0001981!1.64e-13!60;UBERON:0007500!1.64e-13!60;UBERON:0004537!1.64e-13!60;UBERON:0006965!1.64e-13!60;UBERON:0002204!9.41e-12!167;UBERON:0004535!1.76e-11!110;UBERON:0001637!2.22e-11!42;UBERON:0003509!2.22e-11!42;UBERON:0004572!2.22e-11!42;UBERON:0001009!6.42e-11!113;UBERON:0002384!2.05e-09!375;UBERON:0004290!2.31e-09!70;UBERON:0000914!2.80e-09!83;UBERON:0002329!2.80e-09!83;UBERON:0003077!2.80e-09!83;UBERON:0003059!2.80e-09!83;UBERON:0007282!2.80e-09!83;UBERON:0009618!2.80e-09!83;UBERON:0007285!2.80e-09!83;UBERON:0003914!9.80e-09!118;UBERON:0004573!9.83e-09!33;UBERON:0004571!9.83e-09!33;UBERON:0000926!1.08e-08!448;UBERON:0004120!1.08e-08!448;UBERON:0006603!1.08e-08!448;UBERON:0000486!1.73e-08!82;UBERON:0002385!2.11e-08!63;UBERON:0001015!2.11e-08!63;UBERON:0000383!2.11e-08!63;UBERON:0001134!3.84e-08!61;UBERON:0002036!3.84e-08!61;UBERON:0003082!3.84e-08!61;UBERON:0000947!1.85e-07!21;UBERON:0010191!1.85e-07!21;UBERON:0005256!3.37e-07!143;UBERON:0001986!4.12e-07!18;UBERON:0004638!4.12e-07!18;UBERON:0004852!4.12e-07!18;UBERON:0000490!8.97e-07!138 | |ontology_enrichment_uberon=UBERON:0003081!5.19e-15!216;UBERON:0000055!2.19e-14!69;UBERON:0002049!3.66e-14!79;UBERON:0007798!3.66e-14!79;UBERON:0004872!5.85e-14!84;UBERON:0001981!1.64e-13!60;UBERON:0007500!1.64e-13!60;UBERON:0004537!1.64e-13!60;UBERON:0006965!1.64e-13!60;UBERON:0002204!9.41e-12!167;UBERON:0004535!1.76e-11!110;UBERON:0001637!2.22e-11!42;UBERON:0003509!2.22e-11!42;UBERON:0004572!2.22e-11!42;UBERON:0001009!6.42e-11!113;UBERON:0002384!2.05e-09!375;UBERON:0004290!2.31e-09!70;UBERON:0000914!2.80e-09!83;UBERON:0002329!2.80e-09!83;UBERON:0003077!2.80e-09!83;UBERON:0003059!2.80e-09!83;UBERON:0007282!2.80e-09!83;UBERON:0009618!2.80e-09!83;UBERON:0007285!2.80e-09!83;UBERON:0003914!9.80e-09!118;UBERON:0004573!9.83e-09!33;UBERON:0004571!9.83e-09!33;UBERON:0000926!1.08e-08!448;UBERON:0004120!1.08e-08!448;UBERON:0006603!1.08e-08!448;UBERON:0000486!1.73e-08!82;UBERON:0002385!2.11e-08!63;UBERON:0001015!2.11e-08!63;UBERON:0000383!2.11e-08!63;UBERON:0001134!3.84e-08!61;UBERON:0002036!3.84e-08!61;UBERON:0003082!3.84e-08!61;UBERON:0000947!1.85e-07!21;UBERON:0010191!1.85e-07!21;UBERON:0005256!3.37e-07!143;UBERON:0001986!4.12e-07!18;UBERON:0004638!4.12e-07!18;UBERON:0004852!4.12e-07!18;UBERON:0000490!8.97e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0003513;1.68e-09;7!UBERON:0001637;1.71e-09;42!UBERON:0003509;1.71e-09;42!UBERON:0004572;1.71e-09;42!UBERON:0003915;2.13e-09;9!UBERON:0004700;2.13e-09;9!UBERON:0001917;2.13e-09;9!UBERON:0004573;1.31e-07;33!UBERON:0004571;1.31e-07;33!UBERON:0000055;3.29e-07;65!UBERON:0007500;5.72e-07;56!UBERON:0001981;5.72e-07;56!UBERON:0004537;5.72e-07;56!UBERON:0004638;8.34e-07;18!UBERON:0001986;8.34e-07;18!UBERON:0004852;8.34e-07;18 | |||
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| ||
|short_description=p@chr12:54795616..54795632,- | |short_description=p@chr12:54795616..54795632,- | ||
}} | }} |
Latest revision as of 10:03, 24 July 2015
Short description: | p@chr12:54795616..54795632, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:54795616..54795632, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.76e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.76e-18 | 42 |
defensive cell | 8.10e-15 | 48 |
phagocyte | 8.10e-15 | 48 |
multi fate stem cell | 2.78e-12 | 427 |
mesodermal cell | 5.32e-12 | 121 |
somatic stem cell | 8.23e-12 | 433 |
monopoietic cell | 1.27e-11 | 59 |
monocyte | 1.27e-11 | 59 |
monoblast | 1.27e-11 | 59 |
promonocyte | 1.27e-11 | 59 |
stem cell | 3.32e-11 | 441 |
macrophage dendritic cell progenitor | 4.88e-11 | 61 |
endothelial cell | 1.34e-10 | 36 |
myeloid lineage restricted progenitor cell | 9.75e-10 | 66 |
granulocyte monocyte progenitor cell | 1.68e-09 | 67 |
endothelial cell of artery | 1.88e-09 | 9 |
myeloid leukocyte | 1.98e-08 | 72 |
muscle precursor cell | 3.62e-08 | 58 |
myoblast | 3.62e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.62e-08 | 58 |
endothelial cell of vascular tree | 4.18e-08 | 24 |
meso-epithelial cell | 1.26e-07 | 45 |
muscle cell | 5.85e-07 | 55 |
smooth muscle cell | 7.32e-07 | 43 |
smooth muscle myoblast | 7.32e-07 | 43 |
blood vessel endothelial cell | 8.55e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.55e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.11e-11 | 14 |
cell type benign neoplasm | 9.98e-07 | 3 |
leiomyoma | 9.98e-07 | 3 |