FFCP PHASE1:Hg19::chr12:54813229..54813273,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3678 | |EntrezGene=3678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6141 | |HGNC=6141 | ||
|TSSclassifier=strong | |||
|UniProt=P08648 | |UniProt=P08648 | ||
|association_with_transcript=0bp_to_ENST00000293379_5end | |association_with_transcript=0bp_to_ENST00000293379_5end | ||
|cluster_id=chr12:54813229..54813273,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_3_at_ITGA5_5end | |description=CAGE_peak_3_at_ITGA5_5end | ||
|id=chr12:54813229..54813273,- | |id=chr12:54813229..54813273,- | ||
|ontology_enrichment_celltype=CL:0000222!1.09e-20!119;CL:0000115!4.55e-18!35;CL:0000048!1.45e-17!430;CL:0000723!6.08e-17!436;CL:0000034!6.57e-17!444;CL:0002139!1.55e-16!24;CL:0002371!1.09e-15!591;CL:0000144!2.13e-14!625;CL:0000183!1.99e-13!59;CL:0002078!3.15e-13!44;CL:0000071!4.96e-13!18;CL:0002546!4.96e-13!18;CL:0000055!1.11e-12!180;CL:0000680!1.43e-12!57;CL:0000056!1.43e-12!57;CL:0000355!1.43e-12!57;CL:0000187!2.22e-12!54;CL:0000192!2.25e-11!42;CL:0000514!2.25e-11!42;CL:0000213!2.75e-11!57;CL:0000215!2.75e-11!57;CL:0000393!4.56e-10!60;CL:0000211!4.56e-10!60;CL:0002057!9.04e-09!42;CL:0000359!3.14e-08!32;CL:0002320!8.41e-08!365;CL:1000413!1.61e-07!9;CL:0002194!2.66e-07!63;CL:0000576!2.66e-07!63;CL:0000040!2.66e-07!63;CL:0000559!2.66e-07!63;CL:0000860!2.93e-07!45;CL:0002009!4.44e-07!65;CL:0000134!5.33e-07!358;CL:0000766!9.92e-07!76 | |ontology_enrichment_celltype=CL:0000222!1.09e-20!119;CL:0000115!4.55e-18!35;CL:0000048!1.45e-17!430;CL:0000723!6.08e-17!436;CL:0000034!6.57e-17!444;CL:0002139!1.55e-16!24;CL:0002371!1.09e-15!591;CL:0000144!2.13e-14!625;CL:0000183!1.99e-13!59;CL:0002078!3.15e-13!44;CL:0000071!4.96e-13!18;CL:0002546!4.96e-13!18;CL:0000055!1.11e-12!180;CL:0000680!1.43e-12!57;CL:0000056!1.43e-12!57;CL:0000355!1.43e-12!57;CL:0000187!2.22e-12!54;CL:0000192!2.25e-11!42;CL:0000514!2.25e-11!42;CL:0000213!2.75e-11!57;CL:0000215!2.75e-11!57;CL:0000393!4.56e-10!60;CL:0000211!4.56e-10!60;CL:0002057!9.04e-09!42;CL:0000359!3.14e-08!32;CL:0002320!8.41e-08!365;CL:1000413!1.61e-07!9;CL:0002194!2.66e-07!63;CL:0000576!2.66e-07!63;CL:0000040!2.66e-07!63;CL:0000559!2.66e-07!63;CL:0000860!2.93e-07!45;CL:0002009!4.44e-07!65;CL:0000134!5.33e-07!358;CL:0000766!9.92e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.13e-17;24!CL:0000115;1.77e-16;36!CL:0000071;6.59e-14;18!CL:0000860;8.64e-11;33!CL:0002057;8.64e-11;33!CL:0002078;2.18e-09;45!CL:0000192;5.89e-09;43!CL:0000473;1.27e-08;39!CL:0000234;1.27e-08;39!CL:0000359;1.70e-08;32!CL:0000187;1.82e-08;55!CL:1000413;5.45e-08;9!CL:0000213;1.74e-07;58!CL:0000215;1.74e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.99e-21,121;CL:0000115,1.46e-19,36;CL:0000048,6.28e-19,427;CL:0000723,3.45e-18,433;CL:0000034,7.98e-18,441;CL:0002139,1.29e-17,24;CL:0002078,6.27e-14,45;CL:0000071,7.41e-14,18;CL:0002546,7.41e-14,18;CL:0000680,3.16e-13,58;CL:0000056,3.16e-13,58;CL:0000355,3.16e-13,58;CL:0000187,5.18e-13,55;CL:0000192,6.38e-12,43;CL:0000514,6.38e-12,43;CL:0000213,2.75e-11,58;CL:0000215,2.75e-11,58;CL:0000393,6.56e-10,61;CL:0000211,6.56e-10,61;CL:0000359,6.46e-09,32;CL:0002320,1.51e-08,361;CL:0000860,1.62e-08,42;CL:0002057,1.62e-08,42;CL:0000473,3.75e-08,48;CL:0000234,3.75e-08,48;CL:1000413,5.97e-08,9;CL:0002194,9.09e-08,59;CL:0000576,9.09e-08,59;CL:0000040,9.09e-08,59;CL:0000559,9.09e-08,59;CL:0000134,1.14e-07,354;CL:0002009,1.63e-07,61;CL:0000766,6.49e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002546;6.59e-14;18!CL:0000514;5.89e-09;43!CL:0000355;5.29e-08;58!CL:0002057;8.11e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.28e-26!110;UBERON:0000055!7.59e-26!69;UBERON:0001009!8.56e-26!113;UBERON:0002049!1.43e-24!79;UBERON:0007798!1.43e-24!79;UBERON:0004872!5.09e-23!84;UBERON:0003081!6.77e-23!216;UBERON:0001981!2.10e-22!60;UBERON:0007500!2.10e-22!60;UBERON:0004537!2.10e-22!60;UBERON:0006965!2.10e-22!60;UBERON:0001637!1.80e-14!42;UBERON:0003509!1.80e-14!42;UBERON:0004572!1.80e-14!42;UBERON:0000926!1.33e-13!448;UBERON:0004120!1.33e-13!448;UBERON:0006603!1.33e-13!448;UBERON:0002385!1.47e-13!63;UBERON:0001015!1.47e-13!63;UBERON:0000383!1.47e-13!63;UBERON:0003914!1.66e-13!118;UBERON:0002204!3.29e-13!167;UBERON:0004290!3.75e-13!70;UBERON:0001986!4.96e-13!18;UBERON:0004638!4.96e-13!18;UBERON:0004852!4.96e-13!18;UBERON:0001134!5.65e-13!61;UBERON:0002036!5.65e-13!61;UBERON:0003082!5.65e-13!61;UBERON:0004573!3.76e-12!33;UBERON:0004571!3.76e-12!33;UBERON:0000914!8.07e-12!83;UBERON:0002329!8.07e-12!83;UBERON:0003077!8.07e-12!83;UBERON:0003059!8.07e-12!83;UBERON:0007282!8.07e-12!83;UBERON:0009618!8.07e-12!83;UBERON:0007285!8.07e-12!83;UBERON:0000490!1.16e-11!138;UBERON:0000486!1.35e-10!82;UBERON:0000487!8.77e-10!22;UBERON:0006914!5.17e-09!25;UBERON:0005256!4.91e-08!143;UBERON:0000947!1.46e-07!21;UBERON:0010191!1.46e-07!21;UBERON:0003915!1.61e-07!9;UBERON:0004700!1.61e-07!9;UBERON:0001917!1.61e-07!9;UBERON:0002384!2.12e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.59e-14;18!UBERON:0001986;6.59e-14;18!UBERON:0004852;6.59e-14;18!UBERON:0000055;1.55e-13;65!UBERON:0007500;1.29e-12;56!UBERON:0001981;1.29e-12;56!UBERON:0004537;1.29e-12;56!UBERON:0001637;3.98e-12;42!UBERON:0003509;3.98e-12;42!UBERON:0004572;3.98e-12;42!UBERON:0004573;5.30e-12;33!UBERON:0004571;5.30e-12;33!UBERON:0000487;7.28e-11;22!UBERON:0002049;6.39e-10;75!UBERON:0007798;6.39e-10;75!UBERON:0006914;7.77e-10;25!UBERON:0004535;1.11e-08;109!UBERON:0001009;1.23e-08;112!UBERON:0000947;2.74e-08;21!UBERON:0010191;2.74e-08;21!UBERON:0003915;5.45e-08;9!UBERON:0004700;5.45e-08;9!UBERON:0001917;5.45e-08;9!UBERON:0003914;6.26e-08;74!UBERON:0002385;2.12e-07;31!UBERON:0001015;2.12e-07;31!UBERON:0000383;2.12e-07;31 | |||
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| ||
|short_description=p3@ITGA5 | |short_description=p3@ITGA5 | ||
}} | }} |
Latest revision as of 06:31, 19 September 2015
Short description: | p3@ITGA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITGA5_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000293379_5end |
EntrezGene: | ITGA5 |
HGNC: | 6141 |
UniProt: | P08648 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data