FFCP PHASE1:Hg19::chr10:95360157..95360183,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:95360157..95360183,+
|short_description=p@chr10:95360157..95360183,+
|description=CAGE_peak_at_chr10:95360157..95360183,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:95360157..95360183,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr10:95360157..95360183,+ | |||
|id=chr10:95360157..95360183,+ | |||
|ontology_enrichment_celltype=CL:0000136!4.66e-17!15;CL:0000181!2.53e-13!12;CL:0000417!2.53e-13!12;CL:0000668!2.53e-13!12;CL:0000414!2.53e-13!12;CL:0000412!2.53e-13!12;CL:0000182!2.53e-13!12;CL:0002617!1.41e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.66e-32;13!CL:0000182;6.68e-26;12!CL:0002521;2.06e-12;3!CL:0000313;8.24e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.36e-27,15;CL:0000182,7.45e-26,12;CL:0002521,2.12e-12,3;CL:0000313,8.24e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.53e-20;11!UBERON:0009497;1.07e-16;13!UBERON:0001041;3.78e-07;30!UBERON:0003104;6.41e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;8.24e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,8.24e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002107!2.26e-13!19;UBERON:0006925!2.26e-13!19;UBERON:0008836!2.26e-13!19;UBERON:0008835!2.69e-11!22;UBERON:0003894!2.69e-11!22;UBERON:0005057!2.85e-11!26;UBERON:0009854!9.99e-11!23;UBERON:0007023!1.35e-10!115;UBERON:0007499!1.01e-09!25;UBERON:0009497!1.01e-09!25;UBERON:0000015!1.01e-09!25;UBERON:0002423!1.01e-09!25;UBERON:0006235!1.01e-09!25;UBERON:0004161!1.01e-09!25;UBERON:0009856!2.79e-09!26;UBERON:0002368!5.53e-08!35;UBERON:0003929!9.59e-08!54;UBERON:0002365!1.68e-07!31;UBERON:0002330!1.68e-07!31;UBERON:0003127!3.86e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.85e-29;19!UBERON:0006925;9.85e-29;19!UBERON:0002423;1.31e-21;25!UBERON:0002368;5.41e-18;33!UBERON:0002365;1.28e-16;31!UBERON:0002330;1.28e-16;31!UBERON:0000949;1.99e-12;43!UBERON:0002190;2.06e-12;3!UBERON:0004911;8.24e-10;1!UBERON:0002072;8.47e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.08e-28,19;UBERON:0006925,1.08e-28,19;UBERON:0008836,1.08e-28,19;UBERON:0008835,1.19e-24,22;UBERON:0003894,1.19e-24,22;UBERON:0009854,1.54e-23,23;UBERON:0007499,1.41e-21,25;UBERON:0009497,1.41e-21,25;UBERON:0000015,1.41e-21,25;UBERON:0002423,1.41e-21,25;UBERON:0006235,1.41e-21,25;UBERON:0004161,1.41e-21,25;UBERON:0009856,1.04e-20,26;UBERON:0002368,5.23e-19,35;UBERON:0002365,3.28e-17,31;UBERON:0002330,3.28e-17,31;UBERON:0000949,1.67e-14,45;UBERON:0002190,2.12e-12,3;UBERON:0003929,6.14e-12,54;UBERON:0002530,9.32e-11,59;UBERON:0004911,8.24e-10,1;UBERON:0005172,1.92e-09,54;UBERON:0005173,1.92e-09,54;UBERON:0002417,2.15e-08,60;UBERON:0000916,2.15e-08,60;UBERON:0002072,8.61e-08,5;UBERON:0005911,2.04e-07,82 | |||
|phase1_expression=0.181678379270557,1.92690471501885,0.281908808191942,0,0,0,2.53299878168311,0,1.30592814099919,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.2238594018943,14.7424082501644,11.8157981336281,0,2.95172252503473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75848599005639,0,0,0,0,0,0,0,0.460511024178389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89996871767898,0,0,0,0,0,0,7.62564786291911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0,0,2.04836273998782,1.64831716762333,1.28066733322951,0.0984274815147488,0,0,0,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6034920963151,17.2258955585888,0,0.13223260174269,0,0,0,0,0,0,0,0,0,7.61624924717264,2.2562090462043,4.28883807468846,3.93447156851765,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226518157351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,1.00636896795513,0 | |phase1_expression=0.181678379270557,1.92690471501885,0.281908808191942,0,0,0,2.53299878168311,0,1.30592814099919,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.2238594018943,14.7424082501644,11.8157981336281,0,2.95172252503473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75848599005639,0,0,0,0,0,0,0,0.460511024178389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89996871767898,0,0,0,0,0,0,7.62564786291911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0,0,2.04836273998782,1.64831716762333,1.28066733322951,0.0984274815147488,0,0,0,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6034920963151,17.2258955585888,0,0.13223260174269,0,0,0,0,0,0,0,0,0,7.61624924717264,2.2562090462043,4.28883807468846,3.93447156851765,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226518157351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,1.00636896795513,0 | ||
|short_description=p@chr10:95360157..95360183,+ | |||
}} | }} |
Latest revision as of 16:53, 23 July 2015
Short description: | p@chr10:95360157..95360183, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:95360157..95360183, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.36e-27 | 15 |
hepatocyte | 7.45e-26 | 12 |
subcutaneous fat cell | 2.12e-12 | 3 |
serous secreting cell | 8.24e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.08e-28 | 19 |
digestive gland | 1.08e-28 | 19 |
liver bud | 1.08e-28 | 19 |
hepatic diverticulum | 1.19e-24 | 22 |
liver primordium | 1.19e-24 | 22 |
digestive tract diverticulum | 1.54e-23 | 23 |
epithelial sac | 1.41e-21 | 25 |
epithelium of foregut-midgut junction | 1.41e-21 | 25 |
anatomical boundary | 1.41e-21 | 25 |
hepatobiliary system | 1.41e-21 | 25 |
foregut-midgut junction | 1.41e-21 | 25 |
septum transversum | 1.41e-21 | 25 |
sac | 1.04e-20 | 26 |
endocrine gland | 5.23e-19 | 35 |
exocrine gland | 3.28e-17 | 31 |
exocrine system | 3.28e-17 | 31 |
endocrine system | 1.67e-14 | 45 |
subcutaneous adipose tissue | 2.12e-12 | 3 |
gut epithelium | 6.14e-12 | 54 |
gland | 9.32e-11 | 59 |
epithelium of female gonad | 8.24e-10 | 1 |
abdomen element | 1.92e-09 | 54 |
abdominal segment element | 1.92e-09 | 54 |
abdominal segment of trunk | 2.15e-08 | 60 |
abdomen | 2.15e-08 | 60 |
hypodermis | 8.61e-08 | 5 |
endo-epithelium | 2.04e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 8.24e-10 | 1 |