FFCP PHASE1:Hg19::chr12:51985054..51985065,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6334 | |EntrezGene=6334 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10596 | |HGNC=10596 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQD0 | |UniProt=Q9UQD0 | ||
|association_with_transcript=34bp_to_ENST00000354534,NM_014191,uc001ryw.2_5end | |association_with_transcript=34bp_to_ENST00000354534,NM_014191,uc001ryw.2_5end | ||
|cluster_id=chr12:51985054..51985065,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_SCN8A_5end | |description=CAGE_peak_5_at_SCN8A_5end | ||
|id=chr12:51985054..51985065,+ | |id=chr12:51985054..51985065,+ | ||
|ontology_enrichment_celltype=CL:0002620!1.91e-12!23;CL:0000057!7.41e-10!75 | |ontology_enrichment_celltype=CL:0002620!1.91e-12!23;CL:0000057!7.41e-10!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.37e-07;82 | |||
|ontology_enrichment_disease=DOID:17!4.25e-07!5;DOID:450!4.25e-07!5;DOID:66!4.25e-07!5;DOID:423!4.25e-07!5;DOID:0080000!4.25e-07!5;DOID:11722!4.25e-07!5;DOID:2394!8.95e-07!14 | |ontology_enrichment_disease=DOID:17!4.25e-07!5;DOID:450!4.25e-07!5;DOID:66!4.25e-07!5;DOID:423!4.25e-07!5;DOID:0080000!4.25e-07!5;DOID:11722!4.25e-07!5;DOID:2394!8.95e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.01e-32!57;UBERON:0005068!4.01e-32!57;UBERON:0006241!4.01e-32!57;UBERON:0007135!4.01e-32!57;UBERON:0002780!3.80e-30!41;UBERON:0001890!3.80e-30!41;UBERON:0006240!3.80e-30!41;UBERON:0003080!3.83e-29!42;UBERON:0001869!8.47e-28!32;UBERON:0002020!1.80e-27!34;UBERON:0003528!1.80e-27!34;UBERON:0001893!1.88e-27!34;UBERON:0002616!2.96e-27!59;UBERON:0001017!1.98e-26!82;UBERON:0002791!3.64e-26!33;UBERON:0000955!5.42e-26!69;UBERON:0006238!5.42e-26!69;UBERON:0000073!5.53e-26!94;UBERON:0001016!5.53e-26!94;UBERON:0005743!1.37e-25!86;UBERON:0002619!2.09e-24!22;UBERON:0001950!7.92e-22!20;UBERON:0000956!1.18e-20!25;UBERON:0000203!1.18e-20!25;UBERON:0003075!3.36e-20!86;UBERON:0007284!3.36e-20!86;UBERON:0002346!1.26e-18!90;UBERON:0003056!1.53e-17!61;UBERON:0000033!3.50e-13!123;UBERON:0004121!2.96e-12!169;UBERON:0000153!6.98e-12!129;UBERON:0007811!6.98e-12!129;UBERON:0007023!7.83e-12!115;UBERON:0000924!1.42e-11!173;UBERON:0006601!1.42e-11!173;UBERON:0000475!8.12e-10!365;UBERON:0000200!2.78e-09!6;UBERON:0001871!1.09e-08!7;UBERON:0002420!1.20e-08!9;UBERON:0007245!1.20e-08!9;UBERON:0010009!1.20e-08!9;UBERON:0010011!1.20e-08!9;UBERON:0000454!1.20e-08!9;UBERON:0002308!3.12e-08!9;UBERON:0000125!3.12e-08!9;UBERON:0000349!4.91e-08!5;UBERON:0002097!1.21e-07!40;UBERON:0002021!1.52e-07!5;UBERON:0002199!6.58e-07!45;UBERON:0002416!6.58e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.92e-51;22!UBERON:0001869;5.20e-46;32!UBERON:0000956;1.06e-44;25!UBERON:0000203;1.06e-44;25!UBERON:0001950;7.16e-42;20!UBERON:0002791;1.53e-41;32!UBERON:0001893;5.19e-41;34!UBERON:0003528;9.79e-40;34!UBERON:0002020;9.79e-40;34!UBERON:0002780;5.35e-31;41!UBERON:0001890;5.35e-31;41!UBERON:0000349;1.27e-27;5!UBERON:0000200;6.44e-23;6!UBERON:0000073;2.82e-20;53!UBERON:0002616;2.82e-20;53!UBERON:0001870;3.18e-17;3!UBERON:0000955;1.74e-16;68!UBERON:0001017;1.15e-14;75!UBERON:0001871;9.40e-13;6!UBERON:0001876;2.98e-12;2!UBERON:0002702;2.98e-12;2!UBERON:0001954;3.53e-12;2!UBERON:0003022;3.53e-12;2!UBERON:0002421;3.53e-12;2!UBERON:0002600;3.53e-12;2!UBERON:0001016;9.95e-12;83!UBERON:0002021;5.64e-11;5!UBERON:0002420;6.05e-10;9!UBERON:0007245;6.05e-10;9!UBERON:0010009;6.05e-10;9!UBERON:0010011;6.05e-10;9!UBERON:0000454;6.05e-10;9!UBERON:0000988;4.38e-08;3!UBERON:0007023;2.21e-07;114!UBERON:0002902;4.55e-07;1!UBERON:0003112;4.55e-07;1!UBERON:0011158;4.55e-07;1!UBERON:0009899;4.55e-07;1!UBERON:0007190;4.55e-07;1!UBERON:0003128;4.55e-07;1!UBERON:0001703;4.55e-07;1!UBERON:0002241;4.55e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.86e-51,22;UBERON:0001869,1.63e-50,32;UBERON:0001893,2.12e-47,34;UBERON:0003528,3.93e-47,34;UBERON:0002020,3.93e-47,34;UBERON:0000956,3.81e-45,25;UBERON:0000203,3.81e-45,25;UBERON:0002791,9.33e-45,32;UBERON:0002780,1.82e-43,41;UBERON:0001890,1.82e-43,41;UBERON:0003080,1.82e-43,41;UBERON:0006240,1.82e-43,41;UBERON:0001950,2.39e-42,20;UBERON:0001049,4.92e-42,56;UBERON:0005068,4.92e-42,56;UBERON:0006241,4.92e-42,56;UBERON:0007135,4.92e-42,56;UBERON:0000073,1.49e-40,53;UBERON:0002616,1.49e-40,53;UBERON:0000955,1.06e-36,68;UBERON:0006238,1.06e-36,68;UBERON:0001017,4.92e-33,81;UBERON:0001016,2.70e-29,89;UBERON:0003056,4.38e-28,61;UBERON:0000349,1.94e-27,5;UBERON:0003075,2.36e-27,82;UBERON:0007284,2.36e-27,82;UBERON:0002346,7.11e-26,86;UBERON:0000200,3.51e-23,6;UBERON:0007023,1.11e-20,114;UBERON:0010371,1.30e-20,104;UBERON:0001870,3.29e-17,3;UBERON:0010314,5.76e-17,132;UBERON:0004121,4.81e-13,171;UBERON:0000924,4.81e-13,171;UBERON:0006601,4.81e-13,171;UBERON:0001871,6.73e-13,6;UBERON:0001876,3.17e-12,2;UBERON:0001954,3.55e-12,2;UBERON:0002702,3.55e-12,2;UBERON:0003022,3.55e-12,2;UBERON:0002421,3.55e-12,2;UBERON:0002600,3.55e-12,2;UBERON:0000025,2.93e-11,192;UBERON:0002021,6.05e-11,5;UBERON:0011216,7.83e-10,223;UBERON:0002420,8.83e-10,9;UBERON:0007245,8.83e-10,9;UBERON:0010009,8.83e-10,9;UBERON:0010011,8.83e-10,9;UBERON:0000454,8.83e-10,9;UBERON:0000988,3.54e-08,3;UBERON:0004111,5.24e-08,240;UBERON:0007190,3.95e-07,1;UBERON:0003112,4.69e-07,1;UBERON:0011158,4.69e-07,1;UBERON:0003128,4.69e-07,1;UBERON:0001703,4.69e-07,1;UBERON:0002241,4.69e-07,1;UBERON:0004761,4.69e-07,1;UBERON:0009617,4.69e-07,1;UBERON:0002902,5.26e-07,1;UBERON:0009899,5.26e-07,1;UBERON:0002022,5.57e-07,1;UBERON:0002581,6.24e-07,1 | |||
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| ||
|short_description=p5@SCN8A | |short_description=p5@SCN8A | ||
}} | }} |
Latest revision as of 20:25, 18 September 2015
Short description: | p5@SCN8A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SCN8A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 34bp_to_ENST00000354534, NM_014191, uc001ryw.2_5end |
EntrezGene: | SCN8A |
HGNC: | 10596 |
UniProt: | Q9UQD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data