FFCP PHASE1:Hg19::chr12:48298895..48298939,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:48298895..48298939,+ | |||
|description=CAGE_peak_at_chr12:48298895..48298939,+ | |description=CAGE_peak_at_chr12:48298895..48298939,+ | ||
|id=chr12:48298895..48298939,+ | |id=chr12:48298895..48298939,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.80e-10!254;CL:0002076!1.70e-08!43;CL:0002251!8.72e-08!21;CL:0000223!9.84e-07!59 | |ontology_enrichment_celltype=CL:0000066!7.80e-10!254;CL:0002076!1.70e-08!43;CL:0002251!8.72e-08!21;CL:0000223!9.84e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.04e-11!106;DOID:0050687!2.91e-08!143;DOID:1749!3.07e-08!14 | |ontology_enrichment_disease=DOID:305!5.04e-11!106;DOID:0050687!2.91e-08!143;DOID:1749!3.07e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:299;1.75e-08;25!DOID:3119;2.95e-07;14!DOID:3493;3.17e-07;2!DOID:1749;3.59e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.79e-13,106;DOID:0050687,9.41e-09,143;DOID:299,1.38e-08,25;DOID:3493,1.46e-07,2;DOID:3119,2.14e-07,14;DOID:1749,4.13e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.15e-11!155;UBERON:0001555!3.15e-11!155;UBERON:0007026!3.15e-11!155;UBERON:0004119!6.47e-11!169;UBERON:0000925!6.47e-11!169;UBERON:0006595!6.47e-11!169;UBERON:0004921!2.30e-09!129;UBERON:0004185!2.30e-09!129;UBERON:0005153!1.97e-08!37;UBERON:0001004!4.42e-08!72;UBERON:0008947!4.81e-08!38;UBERON:0003258!4.81e-08!38;UBERON:0005178!9.24e-08!34;UBERON:0002224!9.24e-08!34;UBERON:0000063!2.08e-07!97;UBERON:0005181!2.64e-07!35;UBERON:0000065!3.36e-07!53;UBERON:0000464!4.92e-07!104;UBERON:0000077!5.54e-07!130 | |ontology_enrichment_uberon=UBERON:0001007!3.15e-11!155;UBERON:0001555!3.15e-11!155;UBERON:0007026!3.15e-11!155;UBERON:0004119!6.47e-11!169;UBERON:0000925!6.47e-11!169;UBERON:0006595!6.47e-11!169;UBERON:0004921!2.30e-09!129;UBERON:0004185!2.30e-09!129;UBERON:0005153!1.97e-08!37;UBERON:0001004!4.42e-08!72;UBERON:0008947!4.81e-08!38;UBERON:0003258!4.81e-08!38;UBERON:0005178!9.24e-08!34;UBERON:0002224!9.24e-08!34;UBERON:0000063!2.08e-07!97;UBERON:0005181!2.64e-07!35;UBERON:0000065!3.36e-07!53;UBERON:0000464!4.92e-07!104;UBERON:0000077!5.54e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;6.66e-15;22!UBERON:0000160;1.91e-13;17!UBERON:0002294;1.20e-10;7!UBERON:0001173;1.20e-10;7!UBERON:0002108;1.26e-10;4!UBERON:0004921;7.04e-10;33!UBERON:0000007;4.10e-08;2!UBERON:0002394;1.78e-07;4!UBERON:0003928;1.78e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.82e-13,17;UBERON:0005409,5.03e-13,25;UBERON:0002108,9.51e-11,4;UBERON:0002294,2.36e-08,9;UBERON:0001173,2.36e-08,9;UBERON:0004912,2.36e-08,9;UBERON:0000007,3.92e-08,2;UBERON:0001007,3.57e-07,145;UBERON:0001555,3.57e-07,145;UBERON:0007026,3.57e-07,145 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0.697801167972428,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,1.35426486594342,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,0,0,0.32592226663359,0,0,0,0.294605907474837,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0.267540828089713,1.04535523804977,0,0,0,0.253019692019503,0,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,2.35762335895883,0.728590576585084,1.48313777113772,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0.468642863667593,0,0,0,0.352303495931295,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0.337552664482532,0.194874010322397,0.252433774244115,0.368199594569197,0,0,0,0,0.386521706326594,0.272746120590835,0.860413786167011,0.121973706129595,0.132529768321485,0,0.310983165046111,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0.217879444092406,0,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,5.28850285735388,0.171567810298526,0.439001141634502,3.37205259772859,0.502644862058154,0.462942225792648,0,0,0,0.115930404975077,0,0,0,0,2.37061319387782,0,0,0,0,0,0.16798212819886,0.567100388969546,0.447792613514241,0.871901815541886,2.68367875415648,0,0,0,0.720599767084807,0.37872730027914,0.126995788584338,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,0,0.177561725313127,0,0,0.116210378459959,3.98836183652353,0.200506470303285,0.460404944679482,0,0,0,0,0.231046011313244,0.784349769176855,0,0,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0.831076008928724,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.412164046590889,0.183138929636687,0.082509499920588,1.14853107599234,0,0,0.290012154876366,0,0,0,0,0.145016693914229,0.170453254832202,0.356128142586949,0.495854746082934,0.192190067365106,0.510450849978337,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.577332676353072,0.670302275535787,1.08890984861323,1.12972560932135,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0.614481528616916,0,0.166849141711909,0,0,0,0,0,0,2.05854594449042,0,0.121360521749513,0.557216921387392,0,0.23874448473769,0.593929361665277,0.614321404198464,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0.398495976502139,0.828851746593443,0.503865495708552,0,0,0,1.25815691606258,2.32727527078292,0,0,0,0,0,0,0,0.520855522170466,1.22443999994674,0,1.0241410345695,0.254253650292766,7.8007934983419,1.03423011972439,0,0.173624994933292,0,0,1.52581736317083,0.110579259931225,0.295547618953547,0,0.980446171670911,2.64905114129346,0.230850775511391,0.113942055847001,0,0,0.217294743844016,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,1.05499032264014,0.816164040795739,5.51276978592369,0,4.97630965539252,2.12298154808014,3.05515072466813,0.296521128680622,0.86494757262552,0.104421949505455,0.067401132980677,0,0,0,2.73930466504926,0.242780379534093,0.789168805698781,1.20990716048664,0,0.063186579628488,5.86261335716521,1.65901106235595,0,0.330991955875499,0,0,0,0,0,0.391969589657511,1.30588809870604,1.92199335066233,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0.397429223405979,0,1.56441106187842,0.0801588202515337,1.28071796843612,0.799238438328521,1.29681375438695,0,0,0.720273989940749,0,0.471388069233591,0,0.209205692624666,0,0,0,0,0,0,0.262887354279314,0,0,0,1.19807400299395,0,0,0.0671834724867263,0,0,0,0.247247575143499,0,0,0,0,0,0.160753148465019,0.687697182986169,0.415440338029185,0.899895566206002,2.32140586367385,0.121499113316049,1.34173875039706,1.10327990218877,1.20645552710496,0.211200673038813,0.35857467866569,2.1110671705139,0,0,0,0,0,0,0,0,0.340776043570843,0.226624183040251,0.146552233678082,0,0,0.13223260174269,0.342173675768659,0,0.427149650270779,0.314408610199332,0.82847811069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| ||
|short_description=p@chr12:48298895..48298939,+ | |short_description=p@chr12:48298895..48298939,+ | ||
}} | }} |
Latest revision as of 08:50, 24 July 2015
Short description: | p@chr12:48298895..48298939, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:48298895..48298939, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.82e-13 | 17 |
gastrointestinal system | 5.03e-13 | 25 |
small intestine | 9.51e-11 | 4 |
biliary system | 2.36e-08 | 9 |
biliary tree | 2.36e-08 | 9 |
biliary bud | 2.36e-08 | 9 |
pituitary gland | 3.92e-08 | 2 |
digestive system | 3.57e-07 | 145 |
digestive tract | 3.57e-07 | 145 |
primitive gut | 3.57e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.79e-13 | 106 |
cell type cancer | 9.41e-09 | 143 |
adenocarcinoma | 1.38e-08 | 25 |
signet ring cell adenocarcinoma | 1.46e-07 | 2 |
gastrointestinal system cancer | 2.14e-07 | 14 |
squamous cell carcinoma | 4.13e-07 | 14 |