FFCP PHASE1:Hg19::chr10:91098700..91098726,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:91098700..91098726,+
|short_description=p5@IFIT3
|description=CAGE_peak_5_at_IFIT3_5end
|association_with_transcript=284bp_to_AB464597,BT007284,CU674680,C...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3437 | |EntrezGene=3437 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5411 | |HGNC=5411 | ||
|TSSclassifier=strong | |||
|UniProt=O14879 | |UniProt=O14879 | ||
|association_with_transcript=284bp_to_AB464597,BT007284,CU674680,CU678838,JF432276_5end | |||
|cluster_id=chr10:91098700..91098726,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_IFIT3_5end | |||
|id=chr10:91098700..91098726,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.39e-18!42;CL:0000860!3.52e-17!45;CL:0002009!2.07e-12!65;CL:0002194!3.84e-12!63;CL:0000576!3.84e-12!63;CL:0000040!3.84e-12!63;CL:0000559!3.84e-12!63;CL:0000766!2.92e-11!76;CL:0000557!1.48e-10!71;CL:0000839!5.22e-10!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.09e-47;33!CL:0002057;6.09e-47;33!CL:0000473;2.41e-35;39!CL:0000234;2.41e-35;39!CL:0000576;1.27e-22;48!CL:0000766;4.25e-13;69!CL:0000763;1.56e-10;100!CL:0000775;3.92e-09;3!CL:0002379;1.39e-07;1!CL:0002087;5.95e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.29e-40,42;CL:0002057,1.29e-40,42;CL:0000473,2.16e-39,48;CL:0000234,2.16e-39,48;CL:0000766,8.99e-31,72;CL:0002194,9.00e-31,59;CL:0000576,9.00e-31,59;CL:0000040,9.00e-31,59;CL:0000559,9.00e-31,59;CL:0002009,1.17e-29,61;CL:0000839,3.61e-27,66;CL:0000557,1.03e-26,67;CL:0000763,2.98e-19,108;CL:0000049,2.98e-19,108;CL:0000738,1.78e-14,136;CL:0002087,4.06e-14,115;CL:0002031,2.21e-13,120;CL:0002032,1.31e-11,161;CL:0000837,1.31e-11,161;CL:0000037,5.85e-11,168;CL:0000988,3.37e-10,177;CL:0000775,3.39e-09,3;CL:0002379,1.39e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;4.49e-28;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;1.39e-07;1!DOID:3565;1.39e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.39e-07,1;DOID:3565,1.39e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004765!1.80e-09!101;UBERON:0001434!1.80e-09!101;UBERON:0002371!4.96e-09!80;UBERON:0001474!2.45e-08!86;UBERON:0002390!8.35e-07!102;UBERON:0003061!8.35e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.72e-23,76;UBERON:0001474,3.27e-21,82;UBERON:0002390,2.40e-19,98;UBERON:0003061,2.40e-19,98;UBERON:0004765,5.09e-19,90;UBERON:0002405,2.71e-18,93;UBERON:0002193,3.28e-17,108;UBERON:0001434,9.10e-17,100;UBERON:0002204,2.15e-12,167;UBERON:0003081,1.84e-09,203 | |||
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| ||
|short_description=p5@IFIT3 | |||
}} | }} |
Latest revision as of 22:19, 19 September 2015
Short description: | p5@IFIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IFIT3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 284bp_to_AB464597, BT007284, CU674680, CU678838, JF432276_5end |
EntrezGene: | IFIT3 |
HGNC: | 5411 |
UniProt: | O14879 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.29e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.29e-40 | 42 |
defensive cell | 2.16e-39 | 48 |
phagocyte | 2.16e-39 | 48 |
myeloid leukocyte | 8.99e-31 | 72 |
monopoietic cell | 9.00e-31 | 59 |
monocyte | 9.00e-31 | 59 |
monoblast | 9.00e-31 | 59 |
promonocyte | 9.00e-31 | 59 |
macrophage dendritic cell progenitor | 1.17e-29 | 61 |
myeloid lineage restricted progenitor cell | 3.61e-27 | 66 |
granulocyte monocyte progenitor cell | 1.03e-26 | 67 |
myeloid cell | 2.98e-19 | 108 |
common myeloid progenitor | 2.98e-19 | 108 |
leukocyte | 1.78e-14 | 136 |
nongranular leukocyte | 4.06e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 2.21e-13 | 120 |
hematopoietic oligopotent progenitor cell | 1.31e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-11 | 161 |
hematopoietic stem cell | 5.85e-11 | 168 |
hematopoietic cell | 3.37e-10 | 177 |
neutrophil | 3.39e-09 | 3 |
meningothelial cell | 1.39e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.72e-23 | 76 |
bone element | 3.27e-21 | 82 |
hematopoietic system | 2.40e-19 | 98 |
blood island | 2.40e-19 | 98 |
skeletal element | 5.09e-19 | 90 |
immune system | 2.71e-18 | 93 |
hemolymphoid system | 3.28e-17 | 108 |
skeletal system | 9.10e-17 | 100 |
musculoskeletal system | 2.15e-12 | 167 |
lateral plate mesoderm | 1.84e-09 | 203 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.39e-07 | 1 |
meningioma | 1.39e-07 | 1 |