FFCP PHASE1:Hg19::chr12:41233225..41233247,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:41233225..41233247,+ | |||
|coexpression_cluster_id=C358 | |||
|description=CAGE_peak_at_chr12:41233225..41233247,+ | |description=CAGE_peak_at_chr12:41233225..41233247,+ | ||
|id=chr12:41233225..41233247,+ | |id=chr12:41233225..41233247,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.99e-55;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.06e-42!57;UBERON:0005068!2.06e-42!57;UBERON:0006241!2.06e-42!57;UBERON:0007135!2.06e-42!57;UBERON:0002616!8.26e-41!59;UBERON:0000955!6.57e-40!69;UBERON:0006238!6.57e-40!69;UBERON:0007023!1.70e-35!115;UBERON:0001017!8.55e-33!82;UBERON:0003075!2.09e-31!86;UBERON:0007284!2.09e-31!86;UBERON:0005743!4.99e-31!86;UBERON:0000073!6.39e-30!94;UBERON:0001016!6.39e-30!94;UBERON:0002346!9.25e-30!90;UBERON:0002780!2.42e-29!41;UBERON:0001890!2.42e-29!41;UBERON:0006240!2.42e-29!41;UBERON:0003080!1.44e-28!42;UBERON:0002020!1.29e-27!34;UBERON:0003528!1.29e-27!34;UBERON:0002619!2.36e-23!22;UBERON:0001869!4.63e-22!32;UBERON:0000033!5.77e-22!123;UBERON:0002791!2.51e-21!33;UBERON:0003056!4.85e-21!61;UBERON:0000153!1.13e-20!129;UBERON:0007811!1.13e-20!129;UBERON:0001893!1.23e-20!34;UBERON:0000956!2.13e-20!25;UBERON:0000203!2.13e-20!25;UBERON:0004733!7.07e-19!12;UBERON:0002028!7.07e-19!12;UBERON:0007277!7.07e-19!12;UBERON:0002680!9.73e-19!9;UBERON:0001895!9.73e-19!9;UBERON:0010092!9.73e-19!9;UBERON:0004732!2.37e-17!13;UBERON:0001950!5.12e-17!20;UBERON:0004121!1.81e-15!169;UBERON:0002771!5.23e-15!3;UBERON:0000924!5.66e-15!173;UBERON:0006601!5.66e-15!173;UBERON:0003076!6.54e-15!15;UBERON:0003057!6.54e-15!15;UBERON:0000988!3.41e-14!3;UBERON:0000200!4.30e-13!6;UBERON:0003296!1.67e-11!4;UBERON:0010133!1.67e-11!4;UBERON:0001894!3.63e-11!7;UBERON:0006222!3.63e-11!7;UBERON:0001954!3.64e-11!2;UBERON:0003022!3.64e-11!2;UBERON:0002421!3.64e-11!2;UBERON:0002600!3.64e-11!2;UBERON:0001905!4.65e-11!2;UBERON:0002757!4.65e-11!2;UBERON:0010134!4.65e-11!2;UBERON:0002784!4.65e-11!2;UBERON:0005408!4.65e-11!2;UBERON:0001899!4.65e-11!2;UBERON:0000025!9.21e-11!194;UBERON:0001870!1.56e-10!2;UBERON:0002148!3.04e-10!2;UBERON:0009662!3.04e-10!2;UBERON:0001871!8.05e-10!7;UBERON:0000349!1.34e-09!5;UBERON:0002298!1.79e-09!8;UBERON:0000064!9.03e-09!219;UBERON:0002308!1.22e-08!9;UBERON:0000125!1.22e-08!9;UBERON:0004111!2.19e-08!241;UBERON:0002037!3.28e-08!6;UBERON:0006215!3.28e-08!6;UBERON:0005383!1.80e-07!3;UBERON:0005382!1.80e-07!3;UBERON:0000481!4.17e-07!347;UBERON:0006331!4.21e-07!3;UBERON:0000477!6.79e-07!286 | |ontology_enrichment_uberon=UBERON:0001049!2.06e-42!57;UBERON:0005068!2.06e-42!57;UBERON:0006241!2.06e-42!57;UBERON:0007135!2.06e-42!57;UBERON:0002616!8.26e-41!59;UBERON:0000955!6.57e-40!69;UBERON:0006238!6.57e-40!69;UBERON:0007023!1.70e-35!115;UBERON:0001017!8.55e-33!82;UBERON:0003075!2.09e-31!86;UBERON:0007284!2.09e-31!86;UBERON:0005743!4.99e-31!86;UBERON:0000073!6.39e-30!94;UBERON:0001016!6.39e-30!94;UBERON:0002346!9.25e-30!90;UBERON:0002780!2.42e-29!41;UBERON:0001890!2.42e-29!41;UBERON:0006240!2.42e-29!41;UBERON:0003080!1.44e-28!42;UBERON:0002020!1.29e-27!34;UBERON:0003528!1.29e-27!34;UBERON:0002619!2.36e-23!22;UBERON:0001869!4.63e-22!32;UBERON:0000033!5.77e-22!123;UBERON:0002791!2.51e-21!33;UBERON:0003056!4.85e-21!61;UBERON:0000153!1.13e-20!129;UBERON:0007811!1.13e-20!129;UBERON:0001893!1.23e-20!34;UBERON:0000956!2.13e-20!25;UBERON:0000203!2.13e-20!25;UBERON:0004733!7.07e-19!12;UBERON:0002028!7.07e-19!12;UBERON:0007277!7.07e-19!12;UBERON:0002680!9.73e-19!9;UBERON:0001895!9.73e-19!9;UBERON:0010092!9.73e-19!9;UBERON:0004732!2.37e-17!13;UBERON:0001950!5.12e-17!20;UBERON:0004121!1.81e-15!169;UBERON:0002771!5.23e-15!3;UBERON:0000924!5.66e-15!173;UBERON:0006601!5.66e-15!173;UBERON:0003076!6.54e-15!15;UBERON:0003057!6.54e-15!15;UBERON:0000988!3.41e-14!3;UBERON:0000200!4.30e-13!6;UBERON:0003296!1.67e-11!4;UBERON:0010133!1.67e-11!4;UBERON:0001894!3.63e-11!7;UBERON:0006222!3.63e-11!7;UBERON:0001954!3.64e-11!2;UBERON:0003022!3.64e-11!2;UBERON:0002421!3.64e-11!2;UBERON:0002600!3.64e-11!2;UBERON:0001905!4.65e-11!2;UBERON:0002757!4.65e-11!2;UBERON:0010134!4.65e-11!2;UBERON:0002784!4.65e-11!2;UBERON:0005408!4.65e-11!2;UBERON:0001899!4.65e-11!2;UBERON:0000025!9.21e-11!194;UBERON:0001870!1.56e-10!2;UBERON:0002148!3.04e-10!2;UBERON:0009662!3.04e-10!2;UBERON:0001871!8.05e-10!7;UBERON:0000349!1.34e-09!5;UBERON:0002298!1.79e-09!8;UBERON:0000064!9.03e-09!219;UBERON:0002308!1.22e-08!9;UBERON:0000125!1.22e-08!9;UBERON:0004111!2.19e-08!241;UBERON:0002037!3.28e-08!6;UBERON:0006215!3.28e-08!6;UBERON:0005383!1.80e-07!3;UBERON:0005382!1.80e-07!3;UBERON:0000481!4.17e-07!347;UBERON:0006331!4.21e-07!3;UBERON:0000477!6.79e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.82e-37;2!UBERON:0001954;9.82e-37;2!UBERON:0002757;9.82e-37;2!UBERON:0010134;9.82e-37;2!UBERON:0003022;9.82e-37;2!UBERON:0005408;9.82e-37;2!UBERON:0002421;9.82e-37;2!UBERON:0001899;9.82e-37;2!UBERON:0002600;9.82e-37;2!UBERON:0002037;5.90e-28;6!UBERON:0004733;1.51e-24;12!UBERON:0002028;1.51e-24;12!UBERON:0004732;1.07e-22;13!UBERON:0000073;1.01e-20;53!UBERON:0002616;1.01e-20;53!UBERON:0003112;2.71e-19;1!UBERON:0011158;2.71e-19;1!UBERON:0003128;2.71e-19;1!UBERON:0001703;2.71e-19;1!UBERON:0002241;2.71e-19;1!UBERON:0003296;6.17e-19;4!UBERON:0010133;6.17e-19;4!UBERON:0002784;6.17e-19;4!UBERON:0002680;6.80e-19;9!UBERON:0001895;6.80e-19;9!UBERON:0000349;2.33e-15;5!UBERON:0000955;2.72e-14;68!UBERON:0002619;7.36e-13;22!UBERON:0002780;9.62e-13;41!UBERON:0001890;9.62e-13;41!UBERON:0000956;2.04e-11;25!UBERON:0000203;2.04e-11;25!UBERON:0001894;2.98e-11;7!UBERON:0002771;2.48e-10;2!UBERON:0001017;1.65e-09;75!UBERON:0001016;1.11e-08;83!UBERON:0003528;4.40e-08;34!UBERON:0002020;4.40e-08;34!UBERON:0002791;8.33e-08;32!UBERON:0001869;8.33e-08;32!UBERON:0001896;2.63e-07;3!UBERON:0005290;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,5.69e-37,2;UBERON:0003022,5.69e-37,2;UBERON:0002421,5.69e-37,2;UBERON:0002600,5.69e-37,2;UBERON:0001905,1.42e-36,2;UBERON:0002757,1.42e-36,2;UBERON:0010134,1.42e-36,2;UBERON:0005408,1.42e-36,2;UBERON:0001899,1.42e-36,2;UBERON:0000073,1.14e-32,53;UBERON:0002616,1.14e-32,53;UBERON:0001049,6.32e-31,56;UBERON:0005068,6.32e-31,56;UBERON:0006241,6.32e-31,56;UBERON:0007135,6.32e-31,56;UBERON:0002037,6.48e-28,6;UBERON:0006215,6.48e-28,6;UBERON:0000955,4.26e-25,68;UBERON:0006238,4.26e-25,68;UBERON:0004733,1.82e-24,12;UBERON:0002028,1.82e-24,12;UBERON:0007277,1.82e-24,12;UBERON:0004732,1.27e-22,13;UBERON:0001017,4.37e-21,81;UBERON:0003075,4.37e-21,82;UBERON:0007284,4.37e-21,82;UBERON:0002346,4.31e-20,86;UBERON:0003076,1.14e-19,15;UBERON:0003057,1.14e-19,15;UBERON:0003112,2.25e-19,1;UBERON:0011158,2.25e-19,1;UBERON:0003128,2.25e-19,1;UBERON:0001703,2.25e-19,1;UBERON:0002241,2.25e-19,1;UBERON:0004761,2.25e-19,1;UBERON:0009617,2.25e-19,1;UBERON:0001016,5.70e-19,89;UBERON:0002680,7.23e-19,9;UBERON:0001895,7.23e-19,9;UBERON:0010092,7.23e-19,9;UBERON:0003296,7.41e-19,4;UBERON:0010133,7.41e-19,4;UBERON:0002784,7.41e-19,4;UBERON:0007023,1.73e-18,114;UBERON:0010371,1.50e-16,104;UBERON:0010314,9.24e-16,132;UBERON:0000349,1.88e-15,5;UBERON:0002780,2.69e-15,41;UBERON:0001890,2.69e-15,41;UBERON:0003080,2.69e-15,41;UBERON:0006240,2.69e-15,41;UBERON:0002619,6.50e-13,22;UBERON:0000956,1.83e-11,25;UBERON:0000203,1.83e-11,25;UBERON:0001894,3.30e-11,7;UBERON:0006222,3.30e-11,7;UBERON:0002771,1.72e-10,2;UBERON:0005253,2.27e-10,2;UBERON:0003056,2.53e-10,61;UBERON:0004121,1.01e-09,171;UBERON:0000924,1.01e-09,171;UBERON:0006601,1.01e-09,171;UBERON:0002791,4.24e-09,32;UBERON:0001869,4.24e-09,32;UBERON:0011216,6.17e-09,223;UBERON:0000025,1.09e-08,192;UBERON:0003528,1.35e-08,34;UBERON:0002020,1.35e-08,34;UBERON:0001893,1.35e-08,34;UBERON:0001896,2.97e-07,3;UBERON:0005290,2.97e-07,3;UBERON:0010096,2.97e-07,3;UBERON:0004111,8.49e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.844175070377856,1.52581736317083,2.87506075821184,2.36438095162838,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.77064427945048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.250381861413,0,1.33114861844223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.638535436228605,0,0,0,1.61475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0.781078098613847,1.2401207790071,0,0,0,0.496211178389294,0,0,1.07140367175657,1.68141861109412,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0,0.785577949580009,0,0,0,0,0,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0.5647304101948,0.659643100472575,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.844175070377856,1.52581736317083,2.87506075821184,2.36438095162838,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.77064427945048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.250381861413,0,1.33114861844223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.638535436228605,0,0,0,1.61475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0.781078098613847,1.2401207790071,0,0,0,0.496211178389294,0,0,1.07140367175657,1.68141861109412,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0,0.785577949580009,0,0,0,0,0,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0.5647304101948,0.659643100472575,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:41233225..41233247,+ | |short_description=p@chr12:41233225..41233247,+ | ||
}} | }} |
Latest revision as of 08:25, 24 July 2015
Short description: | p@chr12:41233225..41233247, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:41233225..41233247, + |
Coexpression cluster: | C358_cerebellum_middle_occipital_parietal_pineal_medial_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data