FFCP PHASE1:Hg19::chr10:88718314..88718388,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:88718314..88718388,+
|short_description=p1@SNCG
|description=CAGE_peak_1_at_SNCG_5end
|association_with_transcript=0bp_to_ENST00000348795,ENST00000465679_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6623 | |EntrezGene=6623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11141 | |HGNC=11141 | ||
|TSSclassifier=strong | |||
|UniProt=F8W754 | |UniProt=F8W754 | ||
|association_with_transcript=0bp_to_ENST00000348795,ENST00000465679_5end | |||
|cluster_id=chr10:88718314..88718388,+ | |||
|coexpression_cluster_id=C3054 | |||
|description=CAGE_peak_1_at_SNCG_5end | |||
|id=chr10:88718314..88718388,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.04e-10!24;CL:0000115!4.60e-09!35;CL:0000071!5.01e-08!18;CL:0002546!5.01e-08!18;CL:0002078!1.12e-07!44;CL:0000222!4.75e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.63e-10;24!CL:0000115;2.70e-08;36!CL:0000071;3.22e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.53e-10,24;CL:0000115,6.30e-10,36;CL:0000071,3.00e-08,18;CL:0002546,3.00e-08,18;CL:0002078,3.74e-08,45;CL:0000222,6.37e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;3.22e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!1.55e-36!286;UBERON:0004111!2.67e-33!241;UBERON:0007023!8.97e-32!115;UBERON:0000483!3.57e-27!309;UBERON:0000119!5.05e-27!312;UBERON:0000025!2.81e-26!194;UBERON:0000481!9.24e-24!347;UBERON:0001049!9.15e-23!57;UBERON:0005068!9.15e-23!57;UBERON:0006241!9.15e-23!57;UBERON:0007135!9.15e-23!57;UBERON:0003075!2.71e-21!86;UBERON:0007284!2.71e-21!86;UBERON:0000064!2.56e-20!219;UBERON:0000468!1.04e-19!659;UBERON:0000475!2.26e-19!365;UBERON:0002616!2.42e-19!59;UBERON:0000467!4.06e-19!625;UBERON:0002346!5.95e-19!90;UBERON:0000480!8.31e-19!626;UBERON:0000033!1.34e-18!123;UBERON:0000153!6.80e-18!129;UBERON:0007811!6.80e-18!129;UBERON:0000955!1.55e-16!69;UBERON:0006238!1.55e-16!69;UBERON:0003080!5.79e-16!42;UBERON:0005743!6.47e-16!86;UBERON:0001017!1.76e-15!82;UBERON:0000922!2.13e-15!612;UBERON:0002780!2.28e-15!41;UBERON:0001890!2.28e-15!41;UBERON:0006240!2.28e-15!41;UBERON:0002020!2.00e-14!34;UBERON:0003528!2.00e-14!34;UBERON:0003056!2.76e-14!61;UBERON:0002050!3.12e-14!605;UBERON:0005423!3.12e-14!605;UBERON:0001893!4.82e-14!34;UBERON:0000923!4.88e-14!604;UBERON:0005291!4.88e-14!604;UBERON:0006598!4.88e-14!604;UBERON:0002532!4.88e-14!604;UBERON:0001869!1.73e-13!32;UBERON:0002791!1.76e-13!33;UBERON:0004121!1.93e-13!169;UBERON:0000073!2.38e-13!94;UBERON:0001016!2.38e-13!94;UBERON:0000924!2.72e-12!173;UBERON:0006601!2.72e-12!173;UBERON:0002619!1.15e-11!22;UBERON:0000062!1.50e-10!511;UBERON:0001950!2.03e-10!20;UBERON:0000055!3.61e-10!69;UBERON:0000956!4.18e-10!25;UBERON:0000203!4.18e-10!25;UBERON:0002049!4.65e-10!79;UBERON:0007798!4.65e-10!79;UBERON:0003103!1.96e-09!69;UBERON:0000063!2.13e-09!97;UBERON:0004872!5.33e-09!84;UBERON:0003914!9.84e-09!118;UBERON:0001981!3.08e-08!60;UBERON:0007500!3.08e-08!60;UBERON:0004537!3.08e-08!60;UBERON:0006965!3.08e-08!60;UBERON:0003076!4.28e-08!15;UBERON:0003057!4.28e-08!15;UBERON:0001986!5.01e-08!18;UBERON:0004638!5.01e-08!18;UBERON:0004852!5.01e-08!18;UBERON:0000487!1.00e-07!22;UBERON:0006914!1.60e-07!25;UBERON:0001004!4.37e-07!72;UBERON:0001048!4.97e-07!168;UBERON:0004732!6.69e-07!13;UBERON:0003104!7.84e-07!238;UBERON:0009142!7.84e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.28e-12;34!UBERON:0002020;2.28e-12;34!UBERON:0001893;2.66e-12;34!UBERON:0001869;3.43e-12;32!UBERON:0002619;5.06e-12;22!UBERON:0002791;6.98e-12;32!UBERON:0000073;8.32e-12;53!UBERON:0002616;8.32e-12;53!UBERON:0002780;3.26e-11;41!UBERON:0001890;3.26e-11;41!UBERON:0001950;9.87e-11;20!UBERON:0000956;4.74e-10;25!UBERON:0000203;4.74e-10;25!UBERON:0007023;2.00e-09;114!UBERON:0004638;3.22e-08;18!UBERON:0001986;3.22e-08;18!UBERON:0004852;3.22e-08;18!UBERON:0000487;5.30e-08;22!UBERON:0006914;7.19e-08;25!UBERON:0000955;1.56e-07;68!UBERON:0001017;2.12e-07;75!UBERON:0004732;4.15e-07;13 | |||
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| ||
|short_description=p1@SNCG | |||
}} | }} |
Latest revision as of 18:10, 19 September 2015
Short description: | p1@SNCG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNCG_5end |
Coexpression cluster: | C3054_mature_locus_thalamus_pons_amygdala_diencephalon_hippocampus |
Association with transcript: | 0bp_to_ENST00000348795, ENST00000465679_5end |
EntrezGene: | SNCG |
HGNC: | 11141 |
UniProt: | F8W754 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.53e-10 | 24 |
endothelial cell | 6.30e-10 | 36 |
blood vessel endothelial cell | 3.00e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.00e-08 | 18 |
meso-epithelial cell | 3.74e-08 | 45 |
mesodermal cell | 6.37e-07 | 121 |