FFCP PHASE1:Hg19::chr17:4806374..4806394,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1145 | |EntrezGene=1145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1966 | |HGNC=1966 | ||
|TSSclassifier=strong | |||
|UniProt=Q04844 | |UniProt=Q04844 | ||
|association_with_transcript=-5bp_to_ENST00000293780,NM_000080,uc002fzk.1_5end | |association_with_transcript=-5bp_to_ENST00000293780,NM_000080,uc002fzk.1_5end | ||
|cluster_id=chr17:4806374..4806394,- | |||
|coexpression_cluster_id=C188 | |||
|description=CAGE_peak_1_at_CHRNE_5end | |description=CAGE_peak_1_at_CHRNE_5end | ||
|id=chr17:4806374..4806394,- | |id=chr17:4806374..4806394,- | ||
|ontology_enrichment_celltype=CL:0000625!7.97e-16!11;CL:0000791!1.27e-14!18;CL:0000789!1.27e-14!18;CL:0002420!1.27e-14!18;CL:0002419!1.27e-14!18;CL:0000790!1.27e-14!18;CL:0000738!2.43e-14!140;CL:0000037!3.26e-12!172;CL:0000566!3.26e-12!172;CL:0000988!1.71e-11!182;CL:0000084!4.33e-11!25;CL:0000827!4.33e-11!25;CL:0002032!7.57e-11!165;CL:0000837!7.57e-11!165;CL:0002087!1.04e-10!119;CL:0000838!6.46e-10!52;CL:0000542!1.28e-09!53;CL:0000051!1.28e-09!53;CL:0002031!1.50e-09!124;CL:0000623!3.58e-07!3;CL:0000825!3.58e-07!3;CL:0000842!9.26e-07!3 | |ontology_enrichment_celltype=CL:0000625!7.97e-16!11;CL:0000791!1.27e-14!18;CL:0000789!1.27e-14!18;CL:0002420!1.27e-14!18;CL:0002419!1.27e-14!18;CL:0000790!1.27e-14!18;CL:0000738!2.43e-14!140;CL:0000037!3.26e-12!172;CL:0000566!3.26e-12!172;CL:0000988!1.71e-11!182;CL:0000084!4.33e-11!25;CL:0000827!4.33e-11!25;CL:0002032!7.57e-11!165;CL:0000837!7.57e-11!165;CL:0002087!1.04e-10!119;CL:0000838!6.46e-10!52;CL:0000542!1.28e-09!53;CL:0000051!1.28e-09!53;CL:0002031!1.50e-09!124;CL:0000623!3.58e-07!3;CL:0000825!3.58e-07!3;CL:0000842!9.26e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.95e-15;3!CL:0000226;2.53e-14;3!CL:0000842;2.53e-14;3!CL:0000625;2.91e-14;11!CL:0000791;1.78e-08;18!CL:0000789;1.78e-08;18!CL:0002419;1.78e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.96e-15,3;CL:0000825,2.96e-15,3;CL:0000226,2.98e-14,3;CL:0000842,2.98e-14,3;CL:0000625,3.29e-14,11;CL:0000791,1.91e-08,18;CL:0000789,1.91e-08,18;CL:0002420,1.91e-08,18;CL:0002419,1.91e-08,18;CL:0000790,1.91e-08,18;CL:0000767,7.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.78e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-15!115;UBERON:0000178!2.38e-13!15;UBERON:0000179!2.38e-13!15;UBERON:0000463!2.38e-13!15;UBERON:0003296!2.25e-08!4;UBERON:0010133!2.25e-08!4;UBERON:0002390!1.30e-07!102;UBERON:0003061!1.30e-07!102;UBERON:0002193!7.82e-07!112;UBERON:0004151!9.09e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.19e-22;15!UBERON:0000179;2.19e-22;15!UBERON:0000463;2.19e-22;15!UBERON:0003296;2.67e-11;4!UBERON:0010133;2.67e-11;4!UBERON:0002081;9.53e-11;2!UBERON:0002133;9.99e-11;2!UBERON:0000007;1.68e-10;2!UBERON:0000341;7.61e-10;2!UBERON:0002390;1.56e-09;32!UBERON:0004151;1.99e-07;3!UBERON:0003978;2.06e-07;3!UBERON:0000946;2.06e-07;3!UBERON:0001723;4.78e-07;3!UBERON:0001033;4.78e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.85e-22,15;UBERON:0000179,1.85e-22,15;UBERON:0000463,1.85e-22,15;UBERON:0003296,2.59e-11,4;UBERON:0010133,2.59e-11,4;UBERON:0002081,9.55e-11,2;UBERON:0010227,9.55e-11,2;UBERON:0002133,1.00e-10,2;UBERON:0000007,1.68e-10,2;UBERON:0000341,5.81e-10,2;UBERON:0004151,2.00e-07,3;UBERON:0003978,2.06e-07,3;UBERON:0009751,2.06e-07,3;UBERON:0000946,2.06e-07,3;UBERON:0002523,2.06e-07,3;UBERON:0005983,2.06e-07,3;UBERON:0002165,2.06e-07,3;UBERON:0002062,2.06e-07,3;UBERON:0007280,2.06e-07,3;UBERON:0001723,5.16e-07,3;UBERON:0001033,5.16e-07,3;UBERON:0010056,5.16e-07,3 | |||
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| ||
|short_description=p1@CHRNE | |short_description=p1@CHRNE | ||
}} | }} |
Latest revision as of 22:10, 15 September 2015
Short description: | p1@CHRNE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHRNE_5end |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | -5bp_to_ENST00000293780, NM_000080, uc002fzk.1_5end |
EntrezGene: | CHRNE |
HGNC: | 1966 |
UniProt: | Q04844 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.96e-15 | 3 |
pro-NK cell | 2.96e-15 | 3 |
single nucleate cell | 2.98e-14 | 3 |
mononuclear cell | 2.98e-14 | 3 |
CD8-positive, alpha-beta T cell | 3.29e-14 | 11 |
mature alpha-beta T cell | 1.91e-08 | 18 |
alpha-beta T cell | 1.91e-08 | 18 |
immature T cell | 1.91e-08 | 18 |
mature T cell | 1.91e-08 | 18 |
immature alpha-beta T cell | 1.91e-08 | 18 |
basophil | 7.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.85e-22 | 15 |
haemolymphatic fluid | 1.85e-22 | 15 |
organism substance | 1.85e-22 | 15 |
gland of diencephalon | 2.59e-11 | 4 |
neuroendocrine gland | 2.59e-11 | 4 |
cardiac atrium | 9.55e-11 | 2 |
future cardiac atrium | 9.55e-11 | 2 |
atrioventricular valve | 1.00e-10 | 2 |
pituitary gland | 1.68e-10 | 2 |
throat | 5.81e-10 | 2 |
cardiac chamber | 2.00e-07 | 3 |
valve | 2.06e-07 | 3 |
cardiac mesenchyme | 2.06e-07 | 3 |
cardial valve | 2.06e-07 | 3 |
tunica intima | 2.06e-07 | 3 |
heart layer | 2.06e-07 | 3 |
endocardium | 2.06e-07 | 3 |
endocardial cushion | 2.06e-07 | 3 |
presumptive endocardium | 2.06e-07 | 3 |
tongue | 5.16e-07 | 3 |
gustatory system | 5.16e-07 | 3 |
future tongue | 5.16e-07 | 3 |