FFCP PHASE1:Mm9::chrX:97925458..97925461,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71584 | |EntrezGene=71584 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3766 | |||
|TSSclassifier=NA | |||
|UniProt=Q9ESM6 | |UniProt=Q9ESM6 | ||
|association_with_transcript=-63bp_to_ENSMUST00000113744,uc009twj.2_5end | |association_with_transcript=-63bp_to_ENSMUST00000113744,uc009twj.2_5end | ||
|cluster_id=chrX:97925458..97925461,+ | |||
|description=CAGE_peak_7_at_Gdpd2_5end | |description=CAGE_peak_7_at_Gdpd2_5end | ||
|id=chrX:97925458..97925461,+ | |id=chrX:97925458..97925461,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,7.05e-14,2;CL:0002604,7.05e-14,2;CL:0000239,1.39e-10,6;CL:0000677,1.39e-10,6;CL:0000584,1.39e-10,6;CL:0000682,2.63e-09,3;CL:0000075,3.82e-09,7;CL:0002563,3.22e-07,9;CL:0002251,3.22e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!3.27e-07!24 | |ontology_enrichment_uberon=UBERON:0004923!3.27e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.21e-15,31;UBERON:0005409,2.29e-12,47;UBERON:0001242,2.25e-08,13;UBERON:0001262,2.25e-08,13;UBERON:0004786,2.25e-08,13;UBERON:0000344,2.81e-07,15;UBERON:0003350,3.22e-07,9;UBERON:0004808,3.22e-07,9;UBERON:0001277,3.22e-07,9 | |||
|phase1_expression=0,2.79180326111489,0.454999239389536,5.44435580352294,5.00895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,0.68822784320151,2.29692785646008,1.29228598847722,0.861884930743556,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,3.29529274101708,1.94429899074283,0.279972843250725,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.768436610643109,0.207379224616955,0,0,0.856952953211411,0.441737081903227,0,0,0,0,0.766124028511126,0.307213066512487,0.395658863190582,0.731901148819277,0.52091337055676,0.279182999001381,0,0.30559649555362,0.589257170947335,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0,0,0,0.189106080167819,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,0.205809224758569,1.98251269790279,1.85115396664481,0,0,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.198956472041151,0.58489226135736,0,1.94524244887225,1.1948476395262,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714130922658041,0.195133647857799,0,0,0,0,0.345369963731791,0.289298117163023,0,0,0,0,0,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0.469343416127421,0,0,0.98931751764888,0.645857706783622,0.542816324353403,0.477489376012546,0.164140899745061,1.7488850197791,0.370850604021019,0,0.412773735926445,0.370389054739423,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.523511883968059,1.29614973291793,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0.412085900803307,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,2.79180326111489,0.454999239389536,5.44435580352294,5.00895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,0.68822784320151,2.29692785646008,1.29228598847722,0.861884930743556,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,3.29529274101708,1.94429899074283,0.279972843250725,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.768436610643109,0.207379224616955,0,0,0.856952953211411,0.441737081903227,0,0,0,0,0.766124028511126,0.307213066512487,0.395658863190582,0.731901148819277,0.52091337055676,0.279182999001381,0,0.30559649555362,0.589257170947335,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0,0,0,0.189106080167819,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,0.205809224758569,1.98251269790279,1.85115396664481,0,0,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.198956472041151,0.58489226135736,0,1.94524244887225,1.1948476395262,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714130922658041,0.195133647857799,0,0,0,0,0.345369963731791,0.289298117163023,0,0,0,0,0,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0.469343416127421,0,0,0.98931751764888,0.645857706783622,0.542816324353403,0.477489376012546,0.164140899745061,1.7488850197791,0.370850604021019,0,0.412773735926445,0.370389054739423,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.523511883968059,1.29614973291793,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0.412085900803307,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p7@Gdpd2 | |short_description=p7@Gdpd2 | ||
}} | }} |
Latest revision as of 00:55, 2 October 2015
Short description: | p7@Gdpd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Gdpd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3766 |
Association with transcript: | -63bp_to_ENSMUST00000113744, uc009twj.2_5end |
EntrezGene: | Gdpd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 7.05e-14 | 2 |
astrocyte of the hippocampus | 7.05e-14 | 2 |
brush border epithelial cell | 1.39e-10 | 6 |
gut absorptive cell | 1.39e-10 | 6 |
enterocyte | 1.39e-10 | 6 |
M cell of gut | 2.63e-09 | 3 |
columnar/cuboidal epithelial cell | 3.82e-09 | 7 |
intestinal epithelial cell | 3.22e-07 | 9 |
epithelial cell of alimentary canal | 3.22e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.21e-15 | 31 |
gastrointestinal system | 2.29e-12 | 47 |
intestinal mucosa | 2.25e-08 | 13 |
wall of intestine | 2.25e-08 | 13 |
gastrointestinal system mucosa | 2.25e-08 | 13 |
mucosa | 2.81e-07 | 15 |
epithelium of mucosa | 3.22e-07 | 9 |
gastrointestinal system epithelium | 3.22e-07 | 9 |
intestinal epithelium | 3.22e-07 | 9 |