FFCP PHASE1:Hg19::chr12:13065023..13065045,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:13065023..13065045,+ | |||
|coexpression_cluster_id=C814 | |||
|description=CAGE_peak_at_chr12:13065023..13065045,+ | |description=CAGE_peak_at_chr12:13065023..13065045,+ | ||
|id=chr12:13065023..13065045,+ | |id=chr12:13065023..13065045,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.48e-21!254;CL:0000077!1.52e-13!19;CL:1000497!3.18e-07!18;CL:0002518!3.18e-07!18 | |ontology_enrichment_celltype=CL:0000066!4.48e-21!254;CL:0000077!1.52e-13!19;CL:1000497!3.18e-07!18;CL:0002518!3.18e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.23e-21;19!CL:0002231;5.57e-12;3!CL:1000507;2.47e-09;10!CL:1000494;2.47e-09;10!CL:1000449;1.43e-08;15!CL:0002681;1.02e-07;12!CL:0002584;1.02e-07;12!CL:1000497;1.77e-07;17!CL:0002518;1.77e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.55e-21,19;CL:0002231,7.00e-12,3;CL:0000066,4.69e-11,253;CL:1000507,2.08e-09,10;CL:1000494,2.08e-09,10;CL:1000449,1.16e-08,15;CL:0002681,9.01e-08,12;CL:0002584,9.01e-08,12;CL:1000497,1.48e-07,17;CL:0002518,1.48e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.18e-20!106;DOID:0050687!1.82e-17!143;DOID:14566!1.61e-12!239;DOID:162!3.25e-11!235;DOID:299!3.08e-08!25 | |ontology_enrichment_disease=DOID:305!3.18e-20!106;DOID:0050687!1.82e-17!143;DOID:14566!1.61e-12!239;DOID:162!3.25e-11!235;DOID:299!3.08e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:4468;6.20e-08;2!DOID:299;6.48e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,7.73e-08,25;DOID:4468,9.54e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.00e-13!169;UBERON:0000925!4.00e-13!169;UBERON:0006595!4.00e-13!169;UBERON:0001007!2.66e-12!155;UBERON:0001555!2.66e-12!155;UBERON:0007026!2.66e-12!155;UBERON:0004921!3.26e-11!129;UBERON:0004185!3.26e-11!129;UBERON:0006554!2.09e-09!44;UBERON:0003064!2.23e-09!37;UBERON:0001008!5.31e-09!45;UBERON:0005153!5.73e-09!37;UBERON:0005911!6.62e-09!82;UBERON:0005157!7.40e-08!51;UBERON:0003104!8.14e-08!238;UBERON:0009142!8.14e-08!238;UBERON:0002367!8.32e-08!11;UBERON:0010147!8.32e-08!11;UBERON:0009846!8.32e-08!11;UBERON:0003353!8.32e-08!11;UBERON:0004902!8.32e-08!11;UBERON:0003820!8.32e-08!11;UBERON:0009847!8.32e-08!11;UBERON:0000077!1.60e-07!130;UBERON:0008947!2.54e-07!38;UBERON:0003258!2.54e-07!38;UBERON:0000058!3.26e-07!26;UBERON:0003937!6.69e-07!12;UBERON:0005399!6.69e-07!12;UBERON:0000065!8.03e-07!53 | |ontology_enrichment_uberon=UBERON:0004119!4.00e-13!169;UBERON:0000925!4.00e-13!169;UBERON:0006595!4.00e-13!169;UBERON:0001007!2.66e-12!155;UBERON:0001555!2.66e-12!155;UBERON:0007026!2.66e-12!155;UBERON:0004921!3.26e-11!129;UBERON:0004185!3.26e-11!129;UBERON:0006554!2.09e-09!44;UBERON:0003064!2.23e-09!37;UBERON:0001008!5.31e-09!45;UBERON:0005153!5.73e-09!37;UBERON:0005911!6.62e-09!82;UBERON:0005157!7.40e-08!51;UBERON:0003104!8.14e-08!238;UBERON:0009142!8.14e-08!238;UBERON:0002367!8.32e-08!11;UBERON:0010147!8.32e-08!11;UBERON:0009846!8.32e-08!11;UBERON:0003353!8.32e-08!11;UBERON:0004902!8.32e-08!11;UBERON:0003820!8.32e-08!11;UBERON:0009847!8.32e-08!11;UBERON:0000077!1.60e-07!130;UBERON:0008947!2.54e-07!38;UBERON:0003258!2.54e-07!38;UBERON:0000058!3.26e-07!26;UBERON:0003937!6.69e-07!12;UBERON:0005399!6.69e-07!12;UBERON:0000065!8.03e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.47e-09;10!UBERON:0009773;2.47e-09;10!UBERON:0001231;2.47e-09;10!UBERON:0004810;2.47e-09;10!UBERON:0006555;1.43e-08;15!UBERON:0004819;1.43e-08;15!UBERON:0001285;1.43e-08;15!UBERON:0007684;1.43e-08;15!UBERON:0002367;4.19e-08;11!UBERON:0010147;4.19e-08;11!UBERON:0001225;1.02e-07;12!UBERON:0008987;1.02e-07;12!UBERON:0003937;2.12e-07;12!UBERON:0005399;2.12e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.08e-09,10;UBERON:0004211,1.16e-08,15;UBERON:0009773,1.16e-08,15;UBERON:0001231,1.16e-08,15;UBERON:0001285,1.16e-08,15;UBERON:0007684,1.16e-08,15;UBERON:0004208,1.16e-08,15;UBERON:0006555,4.48e-08,16;UBERON:0004819,4.48e-08,16;UBERON:0002367,4.92e-08,11;UBERON:0010147,4.92e-08,11;UBERON:0009846,4.92e-08,11;UBERON:0003353,4.92e-08,11;UBERON:0004902,4.92e-08,11;UBERON:0003820,4.92e-08,11;UBERON:0009847,4.92e-08,11;UBERON:0005153,6.20e-08,37;UBERON:0001225,9.01e-08,12;UBERON:0008987,9.01e-08,12;UBERON:0005911,1.20e-07,82;UBERON:0006554,2.40e-07,47;UBERON:0003937,2.45e-07,12;UBERON:0005399,2.45e-07,12;UBERON:0001008,3.80e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,2.79120467188971,0,0.263766978228454,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0,0.612167784741805,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0.50133791063589,1.59331170856906,0,0,0.0945348171640679,0.665188192387692,0.263504357079378,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0.323292113637624,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.674338760312407,0.723033089650446,0.992645754591546,0.653638332277218,0.71181185733329,0.808987848960987,0.196221465125346,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,1.22988438543114,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0.190254152234598,1.58040879591855,0.858486162094873,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0.600686115687835,0,0.560655421726804,0,0.22001485746285,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,2.19940580600526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,1.45031339509947,3.00759705454927,2.11786274552562,1.03333003348146,0.910455840033585,1.70461739447251,4.06079651616671,0.770153371044148,0,2.92278449306521,0.422206515571503,0,0.680374821106063,0.215915916102139,0,1.35473218771926,0,2.29388645740534,2.49322802678617,0.671624264166535,0,0,0,2.29610251989794,0.650756789328606,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.192190067365106,0,0.30347334256665,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0.404364963146632,3.17020642346017,0.421258456238981,0,0.974853958525138,1.05650146756755,0,0.989838023675989,0,0,0.66343897524122,1.75380354101505,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0,0,0,0,0,0,0.941438007767792,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.71623345421307,0.296964680832639,0.307160702099232,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.409074730008619,0,0,1.79736702294654,0.895105873378046,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.341380344856499,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0,0.113942055847001,0,0.0897576444097721,0.434589487688032,2.23300811812344,0.824378340616761,2.13213910407454,0,0,0,0,0,0,0,0,1.05499032264014,1.14262965711403,0.282706142867882,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,1.21390189767046,0,0,0,0,0,0.207376382794494,0,0.661983911750998,0,0,0,0,1.04135843001079,0.195984794828755,0.261177619741208,0,0,0.580537987734511,0.365446585430928,0.492692742319255,0,0,0,0.274083849293502,0.19871461170299,0,1.95551382734803,0.400794101257669,0,0.19980960958213,0.576361668616424,0,0,0.576219191952599,0,0.235694034616795,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.211200673038813,0,0.191915197319445,0,0,0,0.542999601753713,5.18532894720761,1.63293680054705,0,0,0,0,0,0,0,0,0.171086837884329,0,1.81538601365081,1.10043013569766,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,0.285465333544967,3.76425311517075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14241563650639,0.813741466409323,0,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0.770479321629213,0.428883182749851,1.82696004375648,2.04035332961045,3.70435958918134,0.489473409012935,2.14906609297785,4.01441881309264,1.75427239662966,1.06013487567529,3.47245268887647,1.01365464391844,0,0.345430341731199,2.43087964941906,0,0,0,0,0.327609848846413,0.245772908753719,0.422624246717254,0,0,0,0.567515953566836,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0.196295437002051,0.353909170043221,0.917142992608395,1.27078232765372,0,0,0,0.150420656698515,0,0,0.261906694481422,3.93052602024232,1.03499260351932,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0.177404740325278,0,0,0,0,0.709163045303809,0.222462803784138,0.078493092850514,0,0.280272163313789,0,0.64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| ||
|short_description=p@chr12:13065023..13065045,+ | |short_description=p@chr12:13065023..13065045,+ | ||
}} | }} |
Latest revision as of 06:44, 24 July 2015
Short description: | p@chr12:13065023..13065045, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:13065023..13065045, + |
Coexpression cluster: | C814_Alveolar_mesothelioma_bile_Renal_papillotubular_papillary_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.55e-21 | 19 |
epithelial cell of prostate | 7.00e-12 | 3 |
epithelial cell | 4.69e-11 | 253 |
kidney tubule cell | 2.08e-09 | 10 |
nephron tubule epithelial cell | 2.08e-09 | 10 |
epithelial cell of nephron | 1.16e-08 | 15 |
kidney cortical cell | 9.01e-08 | 12 |
renal cortical epithelial cell | 9.01e-08 | 12 |
kidney cell | 1.48e-07 | 17 |
kidney epithelial cell | 1.48e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.08e-09 | 10 |
nephron epithelium | 1.16e-08 | 15 |
renal tubule | 1.16e-08 | 15 |
nephron tubule | 1.16e-08 | 15 |
nephron | 1.16e-08 | 15 |
uriniferous tubule | 1.16e-08 | 15 |
nephrogenic mesenchyme | 1.16e-08 | 15 |
excretory tube | 4.48e-08 | 16 |
kidney epithelium | 4.48e-08 | 16 |
prostate gland | 4.92e-08 | 11 |
male accessory sex gland | 4.92e-08 | 11 |
embryonic cloacal epithelium | 4.92e-08 | 11 |
epithelium of hindgut | 4.92e-08 | 11 |
urogenital sinus epithelium | 4.92e-08 | 11 |
prostate bud | 4.92e-08 | 11 |
prostate field | 4.92e-08 | 11 |
epithelial bud | 6.20e-08 | 37 |
cortex of kidney | 9.01e-08 | 12 |
renal parenchyma | 9.01e-08 | 12 |
endo-epithelium | 1.20e-07 | 82 |
urinary system structure | 2.40e-07 | 47 |
sex gland | 2.45e-07 | 12 |
male reproductive gland | 2.45e-07 | 12 |
renal system | 3.80e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 7.73e-08 | 25 |
clear cell adenocarcinoma | 9.54e-08 | 2 |