FFCP PHASE1:Hg19::chr12:123560474..123560567,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57605 | |EntrezGene=57605 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21044 | |HGNC=21044 | ||
|TSSclassifier=strong | |||
|UniProt=F5H361 | |UniProt=F5H361 | ||
|association_with_transcript=74bp_to_ENST00000541244_5end | |association_with_transcript=74bp_to_ENST00000541244_5end | ||
|cluster_id=chr12:123560474..123560567,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_3_at_PITPNM2_5end | |description=CAGE_peak_3_at_PITPNM2_5end | ||
|id=chr12:123560474..123560567,- | |id=chr12:123560474..123560567,- | ||
|ontology_enrichment_celltype=CL:0000791!9.77e-23!18;CL:0000789!9.77e-23!18;CL:0002420!9.77e-23!18;CL:0002419!9.77e-23!18;CL:0000790!9.77e-23!18;CL:0000542!5.76e-22!53;CL:0000051!5.76e-22!53;CL:0000838!4.80e-21!52;CL:0000084!3.28e-18!25;CL:0000827!3.28e-18!25;CL:0000625!1.36e-14!11;CL:0000738!9.31e-12!140;CL:0002087!1.92e-09!119;CL:0000624!6.68e-09!6;CL:0000037!7.24e-08!172;CL:0000566!7.24e-08!172;CL:0002031!3.67e-07!124 | |ontology_enrichment_celltype=CL:0000791!9.77e-23!18;CL:0000789!9.77e-23!18;CL:0002420!9.77e-23!18;CL:0002419!9.77e-23!18;CL:0000790!9.77e-23!18;CL:0000542!5.76e-22!53;CL:0000051!5.76e-22!53;CL:0000838!4.80e-21!52;CL:0000084!3.28e-18!25;CL:0000827!3.28e-18!25;CL:0000625!1.36e-14!11;CL:0000738!9.31e-12!140;CL:0002087!1.92e-09!119;CL:0000624!6.68e-09!6;CL:0000037!7.24e-08!172;CL:0000566!7.24e-08!172;CL:0002031!3.67e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.57e-37;18!CL:0000789;1.57e-37;18!CL:0002419;1.57e-37;18!CL:0000084;2.33e-29;25!CL:0000625;1.37e-24;11!CL:0000624;4.34e-17;6!CL:0000542;2.88e-15;53!CL:0000623;2.46e-10;3!CL:0000226;1.35e-09;3!CL:0000842;1.35e-09;3!CL:0000898;2.12e-09;3!CL:0000767;7.74e-09;3!CL:0000815;5.31e-07;2!CL:0000792;5.31e-07;2!CL:0002677;5.31e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.93e-37,18;CL:0000789,1.93e-37,18;CL:0002420,1.93e-37,18;CL:0002419,1.93e-37,18;CL:0000790,1.93e-37,18;CL:0000542,1.74e-29,53;CL:0000051,1.74e-29,53;CL:0000084,2.52e-29,25;CL:0000827,2.52e-29,25;CL:0000838,8.60e-28,52;CL:0000625,1.84e-24,11;CL:0000624,3.93e-17,6;CL:0000738,2.67e-16,136;CL:0002087,2.22e-15,115;CL:0000037,1.45e-11,168;CL:0000988,1.48e-10,177;CL:0000623,2.54e-10,3;CL:0000825,2.54e-10,3;CL:0002031,4.36e-10,120;CL:0000226,1.48e-09,3;CL:0000842,1.48e-09,3;CL:0000898,1.98e-09,3;CL:0000767,6.92e-09,3;CL:0002032,9.11e-09,161;CL:0000837,9.11e-09,161;CL:0000815,4.38e-07,2;CL:0000792,4.38e-07,2;CL:0002677,4.38e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.57e-37;18!CL:0000051;2.88e-15;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.77e-15!115;UBERON:0000178!4.61e-12!15;UBERON:0000179!4.61e-12!15;UBERON:0000463!4.61e-12!15;UBERON:0004177!4.19e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!3.77e-15!115;UBERON:0000178!4.61e-12!15;UBERON:0000179!4.61e-12!15;UBERON:0000463!4.61e-12!15;UBERON:0004177!4.19e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.31e-25;15!UBERON:0000179;2.31e-25;15!UBERON:0000463;2.31e-25;15!UBERON:0002390;1.17e-15;32!UBERON:0002193;7.69e-11;42!UBERON:0002370;1.00e-07;2!UBERON:0005058;1.00e-07;2!UBERON:0009113;1.00e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.65e-25,15;UBERON:0000179,2.65e-25,15;UBERON:0000463,2.65e-25,15;UBERON:0002370,1.29e-07,4;UBERON:0005058,1.29e-07,4;UBERON:0009113,1.29e-07,4;UBERON:0003295,1.29e-07,4;UBERON:0005562,1.29e-07,4;UBERON:0004177,4.54e-07,7;UBERON:0005057,4.54e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.382067028739756,0.0821005894499457,0.157421562627358,2.75354993794233,3.45446458287491,1.54816123316076,0,0,0,0,0,0,0,1.00272223735071,2.60413044859022,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800791974072025,0,1.32208974556972,0,1.1384259382189,1.76171156811282,1.91136614062614,0,1.12101712596307,0,5.31116379307349,3.53709686474248,2.46721798799411,8.19213827414323,12.3850461320764,10.4158517261641,7.79306913631645,4.12218690475142,2.94605907474837,3.32300841875432,6.22848886659536,3.5865569523189,5.85267064019452,3.4531959966772,4.97430032014527,5.21645554323094,12.307784742451,10.1665514674091,14.6349733326968,1.81294948316106,2.29932296161153,3.4362744548263,4.30133476433155,3.18565414324097,2.60433381542567,0.950452044448374,4.9689789295665,7.16725022464743,2.49861453104692,5.20909954496837,2.46338399076314,4.23374160771938,2.13952156626806,3.18613688542158,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0.174129737299267,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1365645613669,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,10.0485687702983,6.46882724578552,9.49738468470138,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,4.13536052245775,4.09856981555372,3.73546452312055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.02979043692868,4.58782324285425,5.69647187174163,6.67048971281809,4.11362273086194,1.94541993357815,2.16012574895246,3.96562588147135,0,0,0,1.67222857613147,0,3.77051769746595,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0.251932747854276,0,1.35393286007176,0,0,0,0,0,2.3948309234694,0,0,0.371072392647405,0,0.7812832832557,0.174919999992391,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0,0.295547618953547,0,0,0,0.615602068030377,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0.19566461893209,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.253243183823515,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0,0,0,0.164831716762333,0.0674035438541849,0,0,0,0.408610218334727,0,0,0,0,0,0.242998226632099,0,0,0.104909176269996,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0.213574825135389,0.628817220398664,0,2.97699613087171,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0.455324382702595,0,0.345701962667338,0,0,0,0,0,0.313972371402056,0.157115589916002,0,0.913158720509496,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0.470317296361523,0,0,0,0,0,0,0.845855261818682,2.44939974299593,0,0,0,0,0,0,0.143339583151451,0,0.407948941145488,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0,4.52322419781107,84.09476060648,110.927514446698,0,0.0636471582781649,0,0,0.342233301085281,1.68380132536469,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,13.2840703770077,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.382067028739756,0.0821005894499457,0.157421562627358,2.75354993794233,3.45446458287491,1.54816123316076,0,0,0,0,0,0,0,1.00272223735071,2.60413044859022,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800791974072025,0,1.32208974556972,0,1.1384259382189,1.76171156811282,1.91136614062614,0,1.12101712596307,0,5.31116379307349,3.53709686474248,2.46721798799411,8.19213827414323,12.3850461320764,10.4158517261641,7.79306913631645,4.12218690475142,2.94605907474837,3.32300841875432,6.22848886659536,3.5865569523189,5.85267064019452,3.4531959966772,4.97430032014527,5.21645554323094,12.307784742451,10.1665514674091,14.6349733326968,1.81294948316106,2.29932296161153,3.4362744548263,4.30133476433155,3.18565414324097,2.60433381542567,0.950452044448374,4.9689789295665,7.16725022464743,2.49861453104692,5.20909954496837,2.46338399076314,4.23374160771938,2.13952156626806,3.18613688542158,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0.174129737299267,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1365645613669,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,10.0485687702983,6.46882724578552,9.49738468470138,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,4.13536052245775,4.09856981555372,3.73546452312055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.02979043692868,4.58782324285425,5.69647187174163,6.67048971281809,4.11362273086194,1.94541993357815,2.16012574895246,3.96562588147135,0,0,0,1.67222857613147,0,3.77051769746595,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0.251932747854276,0,1.35393286007176,0,0,0,0,0,2.3948309234694,0,0,0.371072392647405,0,0.7812832832557,0.174919999992391,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0,0.295547618953547,0,0,0,0.615602068030377,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0.19566461893209,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.253243183823515,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0,0,0,0.164831716762333,0.0674035438541849,0,0,0,0.408610218334727,0,0,0,0,0,0.242998226632099,0,0,0.104909176269996,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0.213574825135389,0.628817220398664,0,2.97699613087171,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0.455324382702595,0,0.345701962667338,0,0,0,0,0,0.313972371402056,0.157115589916002,0,0.913158720509496,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0.470317296361523,0,0,0,0,0,0,0.845855261818682,2.44939974299593,0,0,0,0,0,0,0.143339583151451,0,0.407948941145488,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0,4.52322419781107,84.09476060648,110.927514446698,0,0.0636471582781649,0,0,0.342233301085281,1.68380132536469,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,13.2840703770077,0 | ||
|short_description=p3@PITPNM2 | |short_description=p3@PITPNM2 | ||
}} | }} |
Latest revision as of 01:19, 17 September 2015
Short description: | p3@PITPNM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PITPNM2_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 74bp_to_ENST00000541244_5end |
EntrezGene: | PITPNM2 |
HGNC: | 21044 |
UniProt: | F5H361 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.93e-37 | 18 |
alpha-beta T cell | 1.93e-37 | 18 |
immature T cell | 1.93e-37 | 18 |
mature T cell | 1.93e-37 | 18 |
immature alpha-beta T cell | 1.93e-37 | 18 |
lymphocyte | 1.74e-29 | 53 |
common lymphoid progenitor | 1.74e-29 | 53 |
T cell | 2.52e-29 | 25 |
pro-T cell | 2.52e-29 | 25 |
lymphoid lineage restricted progenitor cell | 8.60e-28 | 52 |
CD8-positive, alpha-beta T cell | 1.84e-24 | 11 |
CD4-positive, alpha-beta T cell | 3.93e-17 | 6 |
leukocyte | 2.67e-16 | 136 |
nongranular leukocyte | 2.22e-15 | 115 |
hematopoietic stem cell | 1.45e-11 | 168 |
hematopoietic cell | 1.48e-10 | 177 |
natural killer cell | 2.54e-10 | 3 |
pro-NK cell | 2.54e-10 | 3 |
hematopoietic lineage restricted progenitor cell | 4.36e-10 | 120 |
single nucleate cell | 1.48e-09 | 3 |
mononuclear cell | 1.48e-09 | 3 |
naive T cell | 1.98e-09 | 3 |
basophil | 6.92e-09 | 3 |
hematopoietic oligopotent progenitor cell | 9.11e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.11e-09 | 161 |
regulatory T cell | 4.38e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.38e-07 | 2 |
naive regulatory T cell | 4.38e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.65e-25 | 15 |
haemolymphatic fluid | 2.65e-25 | 15 |
organism substance | 2.65e-25 | 15 |
thymus | 1.29e-07 | 4 |
hemolymphoid system gland | 1.29e-07 | 4 |
thymic region | 1.29e-07 | 4 |
pharyngeal gland | 1.29e-07 | 4 |
thymus primordium | 1.29e-07 | 4 |
hemopoietic organ | 4.54e-07 | 7 |
immune organ | 4.54e-07 | 7 |