FFCP PHASE1:Hg19::chr10:73724222..73724254,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:73724222..73724254,+
|short_description=p4@CHST3
|description=CAGE_peak_4_at_CHST3_5end
|association_with_transcript=99bp_to_ENST00000373115_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9469 | |EntrezGene=9469 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1971 | |HGNC=1971 | ||
|TSSclassifier=strong | |||
|UniProt=Q7LGC8 | |UniProt=Q7LGC8 | ||
|association_with_transcript=99bp_to_ENST00000373115_5end | |||
|cluster_id=chr10:73724222..73724254,+ | |||
|description=CAGE_peak_4_at_CHST3_5end | |||
|id=chr10:73724222..73724254,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.23e-10!180;CL:0000077!7.91e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;3.35e-07;19!CL:0000136;3.37e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.84e-07,19;CL:0000136,4.04e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.64e-16!365;UBERON:0007023!1.17e-14!115;UBERON:0005743!2.17e-13!86;UBERON:0001049!5.01e-13!57;UBERON:0005068!5.01e-13!57;UBERON:0006241!5.01e-13!57;UBERON:0007135!5.01e-13!57;UBERON:0000468!8.77e-13!659;UBERON:0000073!1.56e-12!94;UBERON:0001016!1.56e-12!94;UBERON:0001017!4.81e-12!82;UBERON:0002616!1.21e-11!59;UBERON:0003075!5.38e-11!86;UBERON:0007284!5.38e-11!86;UBERON:0000481!6.22e-11!347;UBERON:0000955!2.32e-10!69;UBERON:0006238!2.32e-10!69;UBERON:0002346!2.57e-10!90;UBERON:0004121!5.40e-10!169;UBERON:0000477!5.42e-10!286;UBERON:0000483!1.22e-09!309;UBERON:0000924!1.28e-09!173;UBERON:0006601!1.28e-09!173;UBERON:0000119!2.50e-09!312;UBERON:0000467!2.62e-09!625;UBERON:0000480!4.00e-09!626;UBERON:0004111!1.06e-08!241;UBERON:0003080!2.20e-08!42;UBERON:0000062!2.39e-08!511;UBERON:0000033!2.43e-08!123;UBERON:0000153!6.17e-08!129;UBERON:0007811!6.17e-08!129;UBERON:0002780!7.03e-08!41;UBERON:0001890!7.03e-08!41;UBERON:0006240!7.03e-08!41;UBERON:0002050!2.08e-07!605;UBERON:0005423!2.08e-07!605;UBERON:0000922!2.42e-07!612;UBERON:0002020!3.20e-07!34;UBERON:0003528!3.20e-07!34;UBERON:0001893!3.39e-07!34;UBERON:0000923!3.56e-07!604;UBERON:0005291!3.56e-07!604;UBERON:0006598!3.56e-07!604;UBERON:0002532!3.56e-07!604;UBERON:0000025!5.30e-07!194;UBERON:0002791!6.05e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.95e-09;9!UBERON:0000042;4.95e-09;9!UBERON:0003688;7.26e-09;6!UBERON:0002358;7.26e-09;6!UBERON:0003684;7.26e-09;6!UBERON:0001178;7.26e-09;6!UBERON:0004732;2.35e-07;13!UBERON:0001893;2.59e-07;34!UBERON:0002298;2.94e-07;6!UBERON:0000073;3.65e-07;53!UBERON:0002616;3.65e-07;53!UBERON:0003528;5.95e-07;34!UBERON:0002020;5.95e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-15,114;UBERON:0001049,3.15e-14,56;UBERON:0005068,3.15e-14,56;UBERON:0006241,3.15e-14,56;UBERON:0007135,3.15e-14,56;UBERON:0003075,5.15e-12,82;UBERON:0007284,5.15e-12,82;UBERON:0000073,5.54e-12,53;UBERON:0002616,5.54e-12,53;UBERON:0001017,4.47e-11,81;UBERON:0002346,6.55e-11,86;UBERON:0010314,8.64e-11,132;UBERON:0010371,5.96e-10,104;UBERON:0001016,1.04e-09,89;UBERON:0003076,2.06e-09,15;UBERON:0003057,2.06e-09,15;UBERON:0003688,7.59e-09,6;UBERON:0002358,7.59e-09,6;UBERON:0003684,7.59e-09,6;UBERON:0001178,7.59e-09,6;UBERON:0000955,1.30e-08,68;UBERON:0006238,1.30e-08,68;UBERON:0003528,3.65e-08,34;UBERON:0002020,3.65e-08,34;UBERON:0001893,3.96e-08,34;UBERON:0004732,1.21e-07,13;UBERON:0002780,1.77e-07,41;UBERON:0001890,1.77e-07,41;UBERON:0003080,1.77e-07,41;UBERON:0006240,1.77e-07,41;UBERON:0002298,2.78e-07,6;UBERON:0002791,5.09e-07,32 | |||
|phase1_expression=6.35874327446948,2.78330681058278,6.48390258841467,5.00366491765652,2.68176656656373,6.97870819280295,0,0.631719873426831,2.08948502559871,0.491467873003018,0.697801167972428,0.218441372130172,0.263766978228454,0.247532705920093,1.65698687863958,0,0,1.46062018077475,0,1.84681587115182,1.42800483870977,1.56727360739044,3.43483184557268,2.32686522623903,1.50651167513763,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.01210257911091,2.30152611318355,3.2529523714611,1.00267582127178,1.44846518960824,0.795285947051099,0.973269740605272,0.283604451492204,0.221729397462564,0.087834785693126,1.24430121722827,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.694281003215189,1.13061588384802,0.419499436209906,0,0.835979866147242,0,0.35576626268671,0,0,0.760272105718513,0,0,0,0,0,0.563057402416611,0,0,0.183201743930407,0,0,0,0.993943903390637,1.2663051166458,0.132409180813219,2.0078563452417,0.709336764396714,0.560677600142307,1.06748995729705,0,0.933633106199299,0.942974704487816,0.980771418680752,0.454072282934794,0.576175924479999,0.70296429550139,0.312160076830321,0,0.149448680551801,0,0.323745888736263,0.280901613404497,0.408308342509787,0.122834317311768,0.309977343527296,1.18800285728205,0.247266929278557,0.910161361938026,0.718618141816238,0.336672227908132,0.125118519871964,0.554128230968366,0.438977620880838,0.30648779579902,1.65261864797256,0.794025282120147,1.97328599257748,1.70845911054854,0.423863802319124,2.70081986475962,0.206105058476878,0.515281080091258,1.30281799432113,4.72573730275545,2.33848812386877,1.00973509697646,0.276149695926898,1.2931684545505,2.84007674013291,1.71278566986988,1.01736355386293,0,0.545492241181669,0.286804595389004,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,1.28648187638577,1.38134921352481,1.85747171212792,0.721879481669586,0.473227200159376,0.337169380156203,0.482022059766964,0.772057809126758,0.653638332277218,0.71181185733329,0.134831308160164,0.392442930250692,0.38474715694639,0,0,1.6462960453256,0,0,0,0,0,0.245976877086227,0.171567810298526,0.109750285408626,1.1240175325762,0.201057944823262,0.0925884451585296,0,0,0,0,0.587043471179108,0.433099343283221,0,0.190254152234598,0,1.71697232418975,0,0,0,0,0.503946384596579,0.141775097242386,0.895585227028483,0.581267877027924,0.383382679165211,0,0,0,0,0.12624243342638,0.063497894292169,0.381988425558278,0,1.71072446022705,0.616964956219941,0.901029173531752,0.285826432630578,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,1.06375246633948,1.04007436911366,1.02882949704857,2.83698264046557,1.3321108950805,0.857867961948885,1.62786481617433,0,0,1.42156779497018,0,1.20575750823834,1.74306691720059,1.59956785891291,0,0,0,3.59437283237374,1.14861935834114,0,0.723906533337896,1.2328579353023,0.895304816199478,0,0,0,0,3.04913549066956,0,3.09315525111078,0.670065061337395,1.27587750330633,0,0,0,0.736148950314839,0.500170521059677,0.271265023699736,1.03985430765404,1.60586089917446,1.41932173530541,1.63997980989798,0.601892199455438,2.27407504055985,3.10419213877515,0,0.737476674166813,0.781952530212746,0.587403472388222,0.343143423810856,0,0,0,0.303127571446259,3.32870879020994,0,3.2254015016441,4.14347327877769,2.52594084989766,3.45975702990393,4.09365799253363,4.18220194973379,2.96836132889982,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0.120859449591622,0.40101294060657,0.460404944679482,0.459257792658427,0.546273504020151,1.70461739447251,0.902399225814824,0.15403067420883,0,0,0,1.13733384070897,0.170093705276516,0.647747748306418,0,0.270946437543853,1.00337954770971,0.509752546090077,0,0.671624264166535,0,0,1.02580050046556,3.28014645699706,3.90454073597164,0.721287081534056,0.457847324091717,0.247528499761764,0,0.650060246036521,1.6068392984416,0.580024309752732,0.308097234229289,0.614014698904518,0.275673144969061,0.429680979473094,0.290033387828457,0.255679882248303,0.178064071293475,0.330569830721956,0.768760269460425,0.510450849978337,0.50578890427775,0.464845549297286,0.94443704049192,0,0.308033580176089,2.12922412126809,0.869932992075073,0,0.715624433709956,0.372158369359667,0.316379424718726,0.953150969619124,0.767693373934002,0.855877976067841,0.318203247925937,0,0.359744915166629,0.823611089208164,0.471249609382746,1.01091240786658,4.75530963519025,0,0.975267478179181,0.243713489631284,1.05650146756755,0.682499557039929,0.707027159768564,0,0,1.32687795048244,0.876901770507525,0.578775534266688,0.655894752046633,0.405820753925408,0,0.845086807596724,0.143411352204052,0.491245205065606,0,0,1.47775344708365,2.30506425071931,0,0.349934720244983,0.577332676353072,0,0,0.470719003883896,0.43050537267123,1.68471475667626,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.42729628450989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| ||
|short_description=p4@CHST3 | |||
}} | }} |
Latest revision as of 04:48, 19 September 2015
Short description: | p4@CHST3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHST3_5end |
Coexpression cluster: | NA |
Association with transcript: | 99bp_to_ENST00000373115_5end |
EntrezGene: | CHST3 |
HGNC: | 1971 |
UniProt: | Q7LGC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.84e-07 | 19 |
fat cell | 4.04e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-15 | 114 |
neural tube | 3.15e-14 | 56 |
neural rod | 3.15e-14 | 56 |
future spinal cord | 3.15e-14 | 56 |
neural keel | 3.15e-14 | 56 |
neural plate | 5.15e-12 | 82 |
presumptive neural plate | 5.15e-12 | 82 |
regional part of nervous system | 5.54e-12 | 53 |
regional part of brain | 5.54e-12 | 53 |
central nervous system | 4.47e-11 | 81 |
neurectoderm | 6.55e-11 | 86 |
structure with developmental contribution from neural crest | 8.64e-11 | 132 |
ecto-epithelium | 5.96e-10 | 104 |
nervous system | 1.04e-09 | 89 |
posterior neural tube | 2.06e-09 | 15 |
chordal neural plate | 2.06e-09 | 15 |
omentum | 7.59e-09 | 6 |
peritoneum | 7.59e-09 | 6 |
abdominal cavity | 7.59e-09 | 6 |
visceral peritoneum | 7.59e-09 | 6 |
brain | 1.30e-08 | 68 |
future brain | 1.30e-08 | 68 |
brain grey matter | 3.65e-08 | 34 |
gray matter | 3.65e-08 | 34 |
telencephalon | 3.96e-08 | 34 |
segmental subdivision of nervous system | 1.21e-07 | 13 |
regional part of forebrain | 1.77e-07 | 41 |
forebrain | 1.77e-07 | 41 |
anterior neural tube | 1.77e-07 | 41 |
future forebrain | 1.77e-07 | 41 |
brainstem | 2.78e-07 | 6 |
regional part of telencephalon | 5.09e-07 | 32 |