Personal tools

FFCP PHASE1:Mm9::chrX:103338582..103338641,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=279572
|EntrezGene=279572
|HGNC=
|HGNC=
|MCL_coexpression_id=193
|TSSclassifier=NA
|UniProt=Q148Y7,Q6R5N8
|UniProt=Q148Y7,Q6R5N8
|association_with_transcript=0bp_to_NM_205820,uc009ubn.1_5end
|association_with_transcript=0bp_to_NM_205820,uc009ubn.1_5end
|cluster_id=chrX:103338582..103338641,+
|description=CAGE_peak_1_at_Tlr13_5end
|description=CAGE_peak_1_at_Tlr13_5end
|id=chrX:103338582..103338641,+
|id=chrX:103338582..103338641,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!8.65e-10!193;UBERON:0004120!8.65e-10!193;UBERON:0006603!8.65e-10!193;UBERON:0002204!3.66e-09!32;UBERON:0001474!2.38e-08!22;UBERON:0004765!2.38e-08!22;UBERON:0001434!2.38e-08!22;UBERON:0002371!3.99e-08!16
|ontology_enrichment_uberon=UBERON:0000926!8.65e-10!193;UBERON:0004120!8.65e-10!193;UBERON:0006603!8.65e-10!193;UBERON:0002204!3.66e-09!32;UBERON:0001474!2.38e-08!22;UBERON:0004765!2.38e-08!22;UBERON:0001434!2.38e-08!22;UBERON:0002371!3.99e-08!16
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.24e-11,32;UBERON:0001474,4.90e-09,22;UBERON:0004765,4.90e-09,22;UBERON:0001434,4.90e-09,22;UBERON:0002371,1.07e-08,16
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,7.08663435864391,4.89693314689703,6.78243655520211,5.21034847701807,5.51706547337439,2.46625541438102,0.595745707205312,0.261199789138935,0.319984845586813,0.91763712426868,0,0,0,0.190023419456374,0.252030129759931,1.10865255327652,0,0,0,0,0,0,233.540649951195,125.794990468332,136.116173433188,321.174392464934,284.829967227672,188.378016976088,0,0,0,0,0,0,0,0,0,0,0,0,3.34437266846731,11.4613375975503,6.18806510732931,0,1.05798195854407,0,0,0,27.8968912357234,32.6325899647102,26.2877642530057,5.69240209984969,3.07374644257244,0.207379224616955,0.135005938331691,0.210324961351382,0.571301968807607,0,0.61245399607477,0.0958454710182364,0,0,1.0214987046815,0.46081959976873,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,1.37518422999129,1.47314292736834,0.854230084794618,0.186399445825301,1.13589289999776,0.604572480854284,0.579728977403356,0,0.679971333707751,0,1.94932925234301,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,3.65388415100992,32.6261733395436,10.2425075954729,0.520455980298408,1.21786191324856,1.61430848079241,1.80867168663147,4.23319345688537,2.13633205260448,1.48316980640624,6.94076913215576,19.4614321428972,3.558870698843,4.63767188766826,4.363877278217,0,0.292780797011547,0.628340120440365,3.0654846625031,2.39630249011841,0.599902730993408,2.66847476853436,1.19832511523858,1.37250180845588,0,1.21677024134594,1.27857728665165,1.45451631191692,1.1356888414743,2.13862664085664,8.9573018839267,1.76905930903572,3.15662783829711,0,0.229902104433473,0.360124259610698,0.60281927134286,1.49680298132921,1.0249097622788,0.749613796477831,0.517406741478031,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,2.089512999133,1.4404749548556,0.995171334092466,0.702213187313235,1.54408744268829,3.12579849335152,0,0.938104239924385,1.08037236876609,0.710234206755631,1.57411385397923,1.07986979021165,1.39520366850245,0.268273401399619,1.5179494507732,1.6455984991348,1.64167464079095,1.78351381000883,1.31579988682799,2.41505126820156,3.75777972529041,1.89260953707715,0.411618449517138,0.330418782983798,1.58670339998127,0.426576501070468,1.39342003116263,0.902072229254653,0.403367049246685,0.667134131534611,2.28270751335071,1.89811624617805,1.31759163779209,2.5133520880027,2.38747766449381,0.58489226135736,2.69645822596266,1.29682829924817,3.98282546508734,0.189667900953082,0.228497025219458,0,0.610953983535943,0.387904974335251,0.771494018793504,1.13825766823663,0.738050739898011,0.627994911365499,1.1105744752962,0.889357881261447,0.667380422864376,0.982794975566015,0.899448449539415,2.43432145666204,2.894125917029,2.5462585178142,5.75392274901621,7.13394997810156,2.19649130550465,5.75072826109418,9.67566463938109,1.87222603868736,2.77836765741823,0.717589654087649,2.41221760681684,14.2259956428286,0.189491411770485,0.814824882210129,0.848725428875941,0.234690248288502,1.50755631697634,3.09456733151818,3.90267295715598,4.25614889086716,3.98636441367795,1.43509291791738,5.73521601505083,8.63424909329478,7.37710198765709,242.773967142228,176.769347241081,0.983528546038072,0.827810238914197,1.44495530989013,1.64096361229084,0,3.02965112645248,0,0,0,0.238968797952552,0,0,0,0,0,0,2.98074178937364,0.534196811001766,2.44330439030364,5.44401405809367,0,0.242780636154981,0.302323556964751,0.754420319023592,0.885905678642318,0.614870295887855,2.58428293168221,2.90826983582004,1.42598951353889,0.632073515871632,0,1.03135543248187,0.680879211507576,0,0,0.428674070063185,1.41872186913819,1.24858172321449,2.13913726782757,0.913394847343798,1.40803024838226,0.42366414172764,0.661585194164886,0.49465875882444,5.16686165426898,1.5078231232039,0.358117032009409,0.492422699235184,3.49777003955821,1.48340241608408,11.9609616558497,8.2554747185289,21.2973706475168,3.57900068308913,5.60446333656203,4.34678529092393,1.18984900995699,1.53946597556024,1.10559979043539,0,1.42351197111511,1.01659733563424,1.40406943068342,1.04544148007234,1.9652630737156,1.21377911746339,1.65306911450672,2.6175594198403,1.42576470620972,1.86401793926078,0,0.149516546043979,0.330916980914195,0.194451188344048,0.645799117388655,1.01373675294467,0.938857909166032,0.781226309063701,0.209718688851422,0.724752362478018,0.864090018773596,2.21207784439725,0.608175645870493,0.924398614483445,1.81889152168913,1.79026695667481,0.79472541912506,0.721172697119813,0.886137163047463,0.504832249740738,0.762068066549998,0.806609481094724,1.94915761479505,0.769694733122636,2.22066114144981,1.13365191807606,0,0,0,0.579568782096571,5.63047426353546,4.76194223094889,4.93047271881851,1.50471631210609,0,0,0.572895513439397,1.3748254587495,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0,0.682934423016537,1.45864030240976,0.838452650511929,0.551530525350042,0.666740183404846,1.85431551515005,0,1.01078884705519,1.01391719956096,0.754505365544305,1.68554713445788,1.15245274328765,1.32101578597911,1.42888107384922,1.15884325944855,1.54327376370964,1.23625770240992,1.61918812147837,2.40008476669791,1.24233064311536,1.66905332963125,2.18019624948493,1.50575008664529,1.26921911837515,1.46342378298218,0.789209134313529,0.679020569229309,1.12228454331548,0.830445126869219,1.18205378850676,1.22769312950907,1.54936841185966,1.35034627686799,0.999242311751784,1.87145286756327,4.94203424311086,4.20834330551455,1.32354851471709,1.85494268496337
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,7.08663435864391,4.89693314689703,6.78243655520211,5.21034847701807,5.51706547337439,2.46625541438102,0.595745707205312,0.261199789138935,0.319984845586813,0.91763712426868,0,0,0,0.190023419456374,0.252030129759931,1.10865255327652,0,0,0,0,0,0,233.540649951195,125.794990468332,136.116173433188,321.174392464934,284.829967227672,188.378016976088,0,0,0,0,0,0,0,0,0,0,0,0,3.34437266846731,11.4613375975503,6.18806510732931,0,1.05798195854407,0,0,0,27.8968912357234,32.6325899647102,26.2877642530057,5.69240209984969,3.07374644257244,0.207379224616955,0.135005938331691,0.210324961351382,0.571301968807607,0,0.61245399607477,0.0958454710182364,0,0,1.0214987046815,0.46081959976873,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,1.37518422999129,1.47314292736834,0.854230084794618,0.186399445825301,1.13589289999776,0.604572480854284,0.579728977403356,0,0.679971333707751,0,1.94932925234301,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,3.65388415100992,32.6261733395436,10.2425075954729,0.520455980298408,1.21786191324856,1.61430848079241,1.80867168663147,4.23319345688537,2.13633205260448,1.48316980640624,6.94076913215576,19.4614321428972,3.558870698843,4.63767188766826,4.363877278217,0,0.292780797011547,0.628340120440365,3.0654846625031,2.39630249011841,0.599902730993408,2.66847476853436,1.19832511523858,1.37250180845588,0,1.21677024134594,1.27857728665165,1.45451631191692,1.1356888414743,2.13862664085664,8.9573018839267,1.76905930903572,3.15662783829711,0,0.229902104433473,0.360124259610698,0.60281927134286,1.49680298132921,1.0249097622788,0.749613796477831,0.517406741478031,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,2.089512999133,1.4404749548556,0.995171334092466,0.702213187313235,1.54408744268829,3.12579849335152,0,0.938104239924385,1.08037236876609,0.710234206755631,1.57411385397923,1.07986979021165,1.39520366850245,0.268273401399619,1.5179494507732,1.6455984991348,1.64167464079095,1.78351381000883,1.31579988682799,2.41505126820156,3.75777972529041,1.89260953707715,0.411618449517138,0.330418782983798,1.58670339998127,0.426576501070468,1.39342003116263,0.902072229254653,0.403367049246685,0.667134131534611,2.28270751335071,1.89811624617805,1.31759163779209,2.5133520880027,2.38747766449381,0.58489226135736,2.69645822596266,1.29682829924817,3.98282546508734,0.189667900953082,0.228497025219458,0,0.610953983535943,0.387904974335251,0.771494018793504,1.13825766823663,0.738050739898011,0.627994911365499,1.1105744752962,0.889357881261447,0.667380422864376,0.982794975566015,0.899448449539415,2.43432145666204,2.894125917029,2.5462585178142,5.75392274901621,7.13394997810156,2.19649130550465,5.75072826109418,9.67566463938109,1.87222603868736,2.77836765741823,0.717589654087649,2.41221760681684,14.2259956428286,0.189491411770485,0.814824882210129,0.848725428875941,0.234690248288502,1.50755631697634,3.09456733151818,3.90267295715598,4.25614889086716,3.98636441367795,1.43509291791738,5.73521601505083,8.63424909329478,7.37710198765709,242.773967142228,176.769347241081,0.983528546038072,0.827810238914197,1.44495530989013,1.64096361229084,0,3.02965112645248,0,0,0,0.238968797952552,0,0,0,0,0,0,2.98074178937364,0.534196811001766,2.44330439030364,5.44401405809367,0,0.242780636154981,0.302323556964751,0.754420319023592,0.885905678642318,0.614870295887855,2.58428293168221,2.90826983582004,1.42598951353889,0.632073515871632,0,1.03135543248187,0.680879211507576,0,0,0.428674070063185,1.41872186913819,1.24858172321449,2.13913726782757,0.913394847343798,1.40803024838226,0.42366414172764,0.661585194164886,0.49465875882444,5.16686165426898,1.5078231232039,0.358117032009409,0.492422699235184,3.49777003955821,1.48340241608408,11.9609616558497,8.2554747185289,21.2973706475168,3.57900068308913,5.60446333656203,4.34678529092393,1.18984900995699,1.53946597556024,1.10559979043539,0,1.42351197111511,1.01659733563424,1.40406943068342,1.04544148007234,1.9652630737156,1.21377911746339,1.65306911450672,2.6175594198403,1.42576470620972,1.86401793926078,0,0.149516546043979,0.330916980914195,0.194451188344048,0.645799117388655,1.01373675294467,0.938857909166032,0.781226309063701,0.209718688851422,0.724752362478018,0.864090018773596,2.21207784439725,0.608175645870493,0.924398614483445,1.81889152168913,1.79026695667481,0.79472541912506,0.721172697119813,0.886137163047463,0.504832249740738,0.762068066549998,0.806609481094724,1.94915761479505,0.769694733122636,2.22066114144981,1.13365191807606,0,0,0,0.579568782096571,5.63047426353546,4.76194223094889,4.93047271881851,1.50471631210609,0,0,0.572895513439397,1.3748254587495,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0,0.682934423016537,1.45864030240976,0.838452650511929,0.551530525350042,0.666740183404846,1.85431551515005,0,1.01078884705519,1.01391719956096,0.754505365544305,1.68554713445788,1.15245274328765,1.32101578597911,1.42888107384922,1.15884325944855,1.54327376370964,1.23625770240992,1.61918812147837,2.40008476669791,1.24233064311536,1.66905332963125,2.18019624948493,1.50575008664529,1.26921911837515,1.46342378298218,0.789209134313529,0.679020569229309,1.12228454331548,0.830445126869219,1.18205378850676,1.22769312950907,1.54936841185966,1.35034627686799,0.999242311751784,1.87145286756327,4.94203424311086,4.20834330551455,1.32354851471709,1.85494268496337
|short_description=p1@Tlr13
|short_description=p1@Tlr13
}}
}}

Latest revision as of 12:31, 1 October 2015

Short description:p1@Tlr13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tlr13_5end
Coexpression cluster:MCL_coexpression_mm9:193
Association with transcript: 0bp_to_NM_205820, uc009ubn.1_5end
EntrezGene:Tlr13
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tlr13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.09
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.78
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.21
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8233.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1125.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3136.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9321.17
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2284.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4188.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C727.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E732.63
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D226.29
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.65
accessory axillary lymph node, adult.CNhs10475.1063-29H932.63
adrenal gland, adult.CNhs10508.49-24D710.24
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C14.23
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H16.94
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.67
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.96
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.78
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D23.76
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F47.13
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H29.68
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B114.23
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E54.26
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C78.63
lung, neonate N30.CNhs11133.1394-42H27.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1242.77
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1176.77
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G65.44
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G45.17
skin, neonate N03.CNhs11215.662-22H31.51
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G211.96
spleen, embryo E16.CNhs11035.461-43C18.26
spleen, embryo E18.CNhs11011.1271-21F221.30
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H15.60
spleen, neonate N25.CNhs11099.1354-25G34.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F55.63
uterus, adult.CNhs10509.92-27E54.76
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
musculoskeletal system7.24e-1132
bone element4.90e-0922
skeletal element4.90e-0922
skeletal system4.90e-0922
bone marrow1.07e-0816
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:103338582..103338641,%2B&oldid=4303352"