FFCP PHASE1:Hg19::chr10:72362487..72362507,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:72362487..72362507,-
|short_description=p2@PRF1
|description=CAGE_peak_2_at_PRF1_5end
|association_with_transcript=7bp_to_ENST00000373209_5end
|EntrezGen...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5551 | |EntrezGene=5551 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9360 | |HGNC=9360 | ||
|TSSclassifier=strong | |||
|UniProt=P14222 | |UniProt=P14222 | ||
|association_with_transcript=7bp_to_ENST00000373209_5end | |||
|cluster_id=chr10:72362487..72362507,- | |||
|coexpression_cluster_id=C1593 | |||
|description=CAGE_peak_2_at_PRF1_5end | |||
|id=chr10:72362487..72362507,- | |||
|ontology_enrichment_celltype=CL:0000037!2.68e-24!172;CL:0000566!2.68e-24!172;CL:0000988!1.73e-23!182;CL:0002032!7.00e-23!165;CL:0000837!7.00e-23!165;CL:0000738!2.62e-22!140;CL:0000084!4.98e-20!25;CL:0000827!4.98e-20!25;CL:0000838!2.30e-19!52;CL:0002087!5.40e-19!119;CL:0000542!1.03e-18!53;CL:0000051!1.03e-18!53;CL:0002031!4.03e-18!124;CL:0000791!2.76e-17!18;CL:0000789!2.76e-17!18;CL:0002420!2.76e-17!18;CL:0002419!2.76e-17!18;CL:0000790!2.76e-17!18;CL:0000625!1.68e-12!11;CL:0000763!9.13e-08!112;CL:0000049!9.13e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.75e-25;25!CL:0000791;1.97e-24;18!CL:0000789;1.97e-24;18!CL:0002419;1.97e-24;18!CL:0000625;9.00e-19;11!CL:0000542;1.26e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.22e-25,25;CL:0000827,1.22e-25,25;CL:0000791,1.91e-24,18;CL:0000789,1.91e-24,18;CL:0002420,1.91e-24,18;CL:0002419,1.91e-24,18;CL:0000790,1.91e-24,18;CL:0000625,9.28e-19,11;CL:0000037,1.30e-14,168;CL:0000988,1.47e-14,177;CL:0000738,6.44e-14,136;CL:0000838,9.26e-14,52;CL:0000542,2.37e-13,53;CL:0000051,2.37e-13,53;CL:0002032,2.54e-13,161;CL:0000837,2.54e-13,161;CL:0002087,1.99e-12,115;CL:0002031,6.50e-11,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.97e-24;18!CL:0000051;1.26e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-31!115;UBERON:0000178!2.12e-13!15;UBERON:0000179!2.12e-13!15;UBERON:0000463!2.12e-13!15;UBERON:0002390!1.12e-10!102;UBERON:0003061!1.12e-10!102;UBERON:0002193!1.15e-09!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.61e-20;15!UBERON:0000179;1.61e-20;15!UBERON:0000463;1.61e-20;15!UBERON:0002390;9.20e-12;32!UBERON:0002193;2.97e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.52e-20,15;UBERON:0000179,1.52e-20,15;UBERON:0000463,1.52e-20,15;UBERON:0007023,2.83e-14,114;UBERON:0002390,6.16e-11,98;UBERON:0003061,6.16e-11,98;UBERON:0002193,1.42e-10,108;UBERON:0004177,3.70e-08,7;UBERON:0005057,3.70e-08,7;UBERON:0002370,6.27e-07,4;UBERON:0005058,6.27e-07,4;UBERON:0009113,6.27e-07,4;UBERON:0003295,6.27e-07,4;UBERON:0005562,6.27e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.534893840235659,0.164201178899891,0.393553906568396,52.3174488209042,49.5139923545404,41.3359049253923,0,0,0,0.232401601740905,0,0,11.6339035791694,14.4392002178502,29.5134784173558,2.23915474239924,5.83008598834163,3.34848237924443,0.872389432677388,1.13362783106643,0,0.464858073811369,0.822335776043652,0,0.575384784644301,0,0.236482229888585,0.689491361473237,1.93645405075148,0,0.752969358170419,0,0.224723484445085,0.918251677112708,0.641858054152187,0.639337125799041,0.659702600373432,0.398927315243264,0,1.7412554317715,0,0,1.00499466102697,1.0429658368404,0.434377689410233,3.02699751316684,1.10483290796269,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0.382273228125229,0,7.28661131875997,0,0.196709770113833,3.14408610199332,2.87842098599313,8.86088425570594,1.62961133316795,1.89379122293893,1.94826728407911,4.56782873229212,2.06224135232386,3.32300841875432,5.41607727530031,5.63601806792971,6.50296737799391,27.9544437826249,29.2931018852999,8.40428948631652,1.03800594213442,1.33770414044857,1.04535523804977,11.6708622978493,18.3945836928922,8.93431358254838,10.3738073727996,42.0506346907808,42.9715079545236,54.1757665335573,69.4151298948533,85.4950562511515,48.7229833554149,61.5620855314444,69.795879738289,34.0715396049798,37.7090676054745,28.820056372677,0,0,0,0.361439152384566,0,0,0,0,0,0,0.43917392846563,3.79839318943367,0,0,0,0,0.132957960518865,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,1.67292024625129,1.03664057770386,0.432359860250884,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,148.06447521545,99.3035031417713,82.8009887460546,136.300304529093,0,0,0,0.335032530668698,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,20.0564985339201,35.8085573358904,38.6353759248468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57602529119306,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8589409885985,0,0,0,0,0,0.844430541190656,0,0,0,0,0.670302275535787,0,3.01260162485693,0,0,0,0,56.3266846247708,34.4086743214069,46.1414221611072,34.3053756659216,35.7885177584989,31.7751922484432,51.3029865376209,61.0706385746588,0,0,0,0,0,0.213425530045242,0.478278818186467,1.1974762285969,0.5745161103971,1.69338866179106,0,0,4.79292825969704,0,0,0.338583555603207,0.1605880751037,0,0,0,0,0,0,0,0,0,0.540911356951966,2.99764771198038,4.22961015263549,0,4.24873719888493,0,51.70973030475,0,0,0.593929361665277,0,0,0.281338832821026,0,211.443370632933,0,2.98871982376605,2.21027132424918,0,0,0.615424027305347,0,0,0,0,0.789147245095469,141.295024484694,0,0,0.278304294485554,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0,1.38510465306835,0,0,0,0,0.638002319463839,0,1.06606955203727,0,0.627921025580099,1.16348177330109,0.902382642468723,0.588187602953219,1.51039428278258,0,1.43042921082341,0,0,0,0,3.98104772431402,1.68069372556344,1.22206028986725,0,2.96553453471607,3.75919018219639,0.134802265961354,1.60515529459758,0,0,0,0,0.394584402849391,1.20990716048664,0,2.52746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,1.74580229679155,0,0.90392296312213,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,7.09795856554149,0.279282401272254,0.687481272035051,0,0.199679000498991,0.429226048136571,1.78537165953498,0.53746777989381,0,0,0.157566364614447,0.0824158583811665,0,0,0.169346664131569,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0.945668487590378,0.262272940674991,0,0,0,4.2881719582402,0,0,0,0,0,0,1.64185041498678,0,0,2.4913879725274,1.32506888912221,0,0,0,0,12.7077020955557,2.82967749179399,11.5986935497215,5.45782623993146,0,0,0,0,0.7520696820681,0,0,0,0,0,0.250381861413,0,0.332787154610557,1.17983165588629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0.163565394255844,0,0,0,1.9998739585493,0,0,0,0,0,1.24415452006595,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0.192687675289379,0,0.798169295285756,0.205116364240755,0,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,1.0529445968896,0,0.781514011233092,0,0,0,0,0,0.206686796501184,0.19024743058172,0,0.548257766857182,0.496211178389294,0,0,0,0.336283722218824,0.606965604236632,0.227662191351298,1.86274977341542,0.115233987555779,0,0.203909198930495,0.197318320688547,0,0,1.88383422841234,0.157115589916002,0,0,0,0,1.85839014859306,0,0,0,0,0,0,0,0.860454717640555,0,0,1.27016115057279,0,0,0,0,0,0,0,1.23195368227496,0,0,0,0,0,0,0,0,2.00652811080656,0.655678681511872,0,0.735444965261716,0,0,1.48523200163543,0,0,11.0901023216227,9.21747798022154,0,0,0,0,0.730336388246517,0,1.43339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,7.64916223064863,1.60330443159336,0.36757959813938,0,1.36401656792831,0.267964130156178,0,0.310298987585686,1.49263787330687,0.23806443146374,2.90650094262028,1.92431614317159,0,1.20929600728513,0,0.217716747896961,0.342233301085281,4.17582728690443,4.01644350198988,0.332660356546013,0,0,0,0,0,2.32258743947446,0.406896178315738,1.33151354837103,4.42802345900258,1.28227396921293 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.534893840235659,0.164201178899891,0.393553906568396,52.3174488209042,49.5139923545404,41.3359049253923,0,0,0,0.232401601740905,0,0,11.6339035791694,14.4392002178502,29.5134784173558,2.23915474239924,5.83008598834163,3.34848237924443,0.872389432677388,1.13362783106643,0,0.464858073811369,0.822335776043652,0,0.575384784644301,0,0.236482229888585,0.689491361473237,1.93645405075148,0,0.752969358170419,0,0.224723484445085,0.918251677112708,0.641858054152187,0.639337125799041,0.659702600373432,0.398927315243264,0,1.7412554317715,0,0,1.00499466102697,1.0429658368404,0.434377689410233,3.02699751316684,1.10483290796269,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0.382273228125229,0,7.28661131875997,0,0.196709770113833,3.14408610199332,2.87842098599313,8.86088425570594,1.62961133316795,1.89379122293893,1.94826728407911,4.56782873229212,2.06224135232386,3.32300841875432,5.41607727530031,5.63601806792971,6.50296737799391,27.9544437826249,29.2931018852999,8.40428948631652,1.03800594213442,1.33770414044857,1.04535523804977,11.6708622978493,18.3945836928922,8.93431358254838,10.3738073727996,42.0506346907808,42.9715079545236,54.1757665335573,69.4151298948533,85.4950562511515,48.7229833554149,61.5620855314444,69.795879738289,34.0715396049798,37.7090676054745,28.820056372677,0,0,0,0.361439152384566,0,0,0,0,0,0,0.43917392846563,3.79839318943367,0,0,0,0,0.132957960518865,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,1.67292024625129,1.03664057770386,0.432359860250884,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,148.06447521545,99.3035031417713,82.8009887460546,136.300304529093,0,0,0,0.335032530668698,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,20.0564985339201,35.8085573358904,38.6353759248468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57602529119306,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8589409885985,0,0,0,0,0,0.844430541190656,0,0,0,0,0.670302275535787,0,3.01260162485693,0,0,0,0,56.3266846247708,34.4086743214069,46.1414221611072,34.3053756659216,35.7885177584989,31.7751922484432,51.3029865376209,61.0706385746588,0,0,0,0,0,0.213425530045242,0.478278818186467,1.1974762285969,0.5745161103971,1.69338866179106,0,0,4.79292825969704,0,0,0.338583555603207,0.1605880751037,0,0,0,0,0,0,0,0,0,0.540911356951966,2.99764771198038,4.22961015263549,0,4.24873719888493,0,51.70973030475,0,0,0.593929361665277,0,0,0.281338832821026,0,211.443370632933,0,2.98871982376605,2.21027132424918,0,0,0.615424027305347,0,0,0,0,0.789147245095469,141.295024484694,0,0,0.278304294485554,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0,1.38510465306835,0,0,0,0,0.638002319463839,0,1.06606955203727,0,0.627921025580099,1.16348177330109,0.902382642468723,0.588187602953219,1.51039428278258,0,1.43042921082341,0,0,0,0,3.98104772431402,1.68069372556344,1.22206028986725,0,2.96553453471607,3.75919018219639,0.134802265961354,1.60515529459758,0,0,0,0,0.394584402849391,1.20990716048664,0,2.52746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,1.74580229679155,0,0.90392296312213,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,7.09795856554149,0.279282401272254,0.687481272035051,0,0.199679000498991,0.429226048136571,1.78537165953498,0.53746777989381,0,0,0.157566364614447,0.0824158583811665,0,0,0.169346664131569,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0.945668487590378,0.262272940674991,0,0,0,4.2881719582402,0,0,0,0,0,0,1.64185041498678,0,0,2.4913879725274,1.32506888912221,0,0,0,0,12.7077020955557,2.82967749179399,11.5986935497215,5.45782623993146,0,0,0,0,0.7520696820681,0,0,0,0,0,0.250381861413,0,0.332787154610557,1.17983165588629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0.163565394255844,0,0,0,1.9998739585493,0,0,0,0,0,1.24415452006595,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0.192687675289379,0,0.798169295285756,0.205116364240755,0,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,1.0529445968896,0,0.781514011233092,0,0,0,0,0,0.206686796501184,0.19024743058172,0,0.548257766857182,0.496211178389294,0,0,0,0.336283722218824,0.606965604236632,0.227662191351298,1.86274977341542,0.115233987555779,0,0.203909198930495,0.197318320688547,0,0,1.88383422841234,0.157115589916002,0,0,0,0,1.85839014859306,0,0,0,0,0,0,0,0.860454717640555,0,0,1.27016115057279,0,0,0,0,0,0,0,1.23195368227496,0,0,0,0,0,0,0,0,2.00652811080656,0.655678681511872,0,0.735444965261716,0,0,1.48523200163543,0,0,11.0901023216227,9.21747798022154,0,0,0,0,0.730336388246517,0,1.43339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,7.64916223064863,1.60330443159336,0.36757959813938,0,1.36401656792831,0.267964130156178,0,0.310298987585686,1.49263787330687,0.23806443146374,2.90650094262028,1.92431614317159,0,1.20929600728513,0,0.217716747896961,0.342233301085281,4.17582728690443,4.01644350198988,0.332660356546013,0,0,0,0,0,2.32258743947446,0.406896178315738,1.33151354837103,4.42802345900258,1.28227396921293 | ||
|short_description=p2@PRF1 | |||
}} | }} |
Latest revision as of 02:31, 19 September 2015
Short description: | p2@PRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRF1_5end |
Coexpression cluster: | C1593_anaplastic_NK_blood_Natural_CD8_Whole_adult |
Association with transcript: | 7bp_to_ENST00000373209_5end |
EntrezGene: | PRF1 |
HGNC: | 9360 |
UniProt: | P14222 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.22e-25 | 25 |
pro-T cell | 1.22e-25 | 25 |
mature alpha-beta T cell | 1.91e-24 | 18 |
alpha-beta T cell | 1.91e-24 | 18 |
immature T cell | 1.91e-24 | 18 |
mature T cell | 1.91e-24 | 18 |
immature alpha-beta T cell | 1.91e-24 | 18 |
CD8-positive, alpha-beta T cell | 9.28e-19 | 11 |
hematopoietic stem cell | 1.30e-14 | 168 |
hematopoietic cell | 1.47e-14 | 177 |
leukocyte | 6.44e-14 | 136 |
lymphoid lineage restricted progenitor cell | 9.26e-14 | 52 |
lymphocyte | 2.37e-13 | 53 |
common lymphoid progenitor | 2.37e-13 | 53 |
hematopoietic oligopotent progenitor cell | 2.54e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.54e-13 | 161 |
nongranular leukocyte | 1.99e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 6.50e-11 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 1.52e-20 | 15 |
haemolymphatic fluid | 1.52e-20 | 15 |
organism substance | 1.52e-20 | 15 |
adult organism | 2.83e-14 | 114 |
hematopoietic system | 6.16e-11 | 98 |
blood island | 6.16e-11 | 98 |
hemolymphoid system | 1.42e-10 | 108 |
hemopoietic organ | 3.70e-08 | 7 |
immune organ | 3.70e-08 | 7 |
thymus | 6.27e-07 | 4 |
hemolymphoid system gland | 6.27e-07 | 4 |
thymic region | 6.27e-07 | 4 |
pharyngeal gland | 6.27e-07 | 4 |
thymus primordium | 6.27e-07 | 4 |