FFCP PHASE1:Hg19::chr17:3572087..3572119,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83460 | |EntrezGene=83460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28430 | |HGNC=28430 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BV81 | |UniProt=Q9BV81 | ||
|association_with_transcript=0bp_to_ENST00000248378,ENST00000397133,NM_001014764,NM_031298,uc002fwf.1,uc002fwg.1_5end | |association_with_transcript=0bp_to_ENST00000248378,ENST00000397133,NM_001014764,NM_031298,uc002fwf.1,uc002fwg.1_5end | ||
|cluster_id=chr17:3572087..3572119,+ | |||
|coexpression_cluster_id=C3614 | |||
|description=CAGE_peak_1_at_TMEM93_5end | |description=CAGE_peak_1_at_TMEM93_5end | ||
|id=chr17:3572087..3572119,+ | |id=chr17:3572087..3572119,+ | ||
|ontology_enrichment_celltype=CL:0000012!2.87e-32!682;CL:0000548!1.30e-31!679;CL:0000004!1.30e-31!679;CL:0000255!1.30e-31!679;CL:0000144!3.85e-23!625;CL:0000003!5.75e-22!722;CL:0002321!1.32e-21!248;CL:0000220!6.30e-21!246;CL:0000066!1.30e-19!254;CL:0002371!3.80e-17!591;CL:0000222!1.59e-14!119;CL:0000055!2.55e-11!180;CL:0000063!4.19e-11!578;CL:0000183!1.36e-08!59;CL:0000213!1.59e-08!57;CL:0000215!1.59e-08!57;CL:1000449!9.16e-08!16;CL:0000393!9.37e-08!60;CL:0000211!9.37e-08!60;CL:0000076!1.74e-07!62;CL:0000192!2.23e-07!42;CL:0000514!2.23e-07!42;CL:0000221!3.60e-07!71;CL:1000497!5.63e-07!18;CL:0002518!5.63e-07!18 | |ontology_enrichment_celltype=CL:0000012!2.87e-32!682;CL:0000548!1.30e-31!679;CL:0000004!1.30e-31!679;CL:0000255!1.30e-31!679;CL:0000144!3.85e-23!625;CL:0000003!5.75e-22!722;CL:0002321!1.32e-21!248;CL:0000220!6.30e-21!246;CL:0000066!1.30e-19!254;CL:0002371!3.80e-17!591;CL:0000222!1.59e-14!119;CL:0000055!2.55e-11!180;CL:0000063!4.19e-11!578;CL:0000183!1.36e-08!59;CL:0000213!1.59e-08!57;CL:0000215!1.59e-08!57;CL:1000449!9.16e-08!16;CL:0000393!9.37e-08!60;CL:0000211!9.37e-08!60;CL:0000076!1.74e-07!62;CL:0000192!2.23e-07!42;CL:0000514!2.23e-07!42;CL:0000221!3.60e-07!71;CL:1000497!5.63e-07!18;CL:0002518!5.63e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.37e-08;15!CL:1000497;1.19e-07;17!CL:0002518;1.19e-07;17!CL:0002681;2.15e-07;12!CL:0002584;2.15e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.23e-21,250;CL:0000066,7.62e-20,253;CL:0000222,1.76e-14,121;CL:0000213,8.98e-09,58;CL:0000215,8.98e-09,58;CL:1000449,1.42e-08,15;CL:1000497,1.21e-07,17;CL:0002518,1.21e-07,17;CL:0000076,1.68e-07,63;CL:0000393,1.82e-07,61;CL:0000211,1.82e-07,61;CL:0002681,2.21e-07,12;CL:0002584,2.21e-07,12;CL:0000221,3.40e-07,72;CL:0000192,4.99e-07,43;CL:0000514,4.99e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.77e-10!143;UBERON:0003914!4.04e-09!118;UBERON:0000490!7.19e-09!138;UBERON:0000486!2.00e-08!82;UBERON:0003104!5.33e-08!238;UBERON:0009142!5.33e-08!238;UBERON:0004290!7.47e-08!70;UBERON:0004211!9.16e-08!16;UBERON:0001285!9.16e-08!16;UBERON:0007684!9.16e-08!16;UBERON:0003220!9.16e-08!16;UBERON:0004208!9.16e-08!16;UBERON:0000914!2.57e-07!83;UBERON:0002329!2.57e-07!83;UBERON:0003077!2.57e-07!83;UBERON:0003059!2.57e-07!83;UBERON:0007282!2.57e-07!83;UBERON:0009618!2.57e-07!83;UBERON:0007285!2.57e-07!83;UBERON:0001134!5.16e-07!61;UBERON:0002036!5.16e-07!61;UBERON:0003082!5.16e-07!61;UBERON:0001737!5.80e-07!9;UBERON:0002049!6.05e-07!79;UBERON:0007798!6.05e-07!79;UBERON:0002100!7.75e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.37e-08;15!UBERON:0004819;1.37e-08;15!UBERON:0001285;1.37e-08;15!UBERON:0007684;1.37e-08;15!UBERON:0000353;9.29e-08;15!UBERON:0001225;2.15e-07;12!UBERON:0008987;2.15e-07;12!UBERON:0001737;5.81e-07;9!UBERON:0001557;5.81e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,5.49e-10,78;UBERON:0000490,1.46e-09,148;UBERON:0003914,2.44e-09,117;UBERON:0003104,1.02e-08,160;UBERON:0009142,1.02e-08,160;UBERON:0004211,1.42e-08,15;UBERON:0009773,1.42e-08,15;UBERON:0001231,1.42e-08,15;UBERON:0001285,1.42e-08,15;UBERON:0007684,1.42e-08,15;UBERON:0004208,1.42e-08,15;UBERON:0005256,2.54e-08,122;UBERON:0000486,3.58e-08,83;UBERON:0000353,9.39e-08,15;UBERON:0002329,1.37e-07,71;UBERON:0003059,1.37e-07,71;UBERON:0007282,1.37e-07,71;UBERON:0004290,1.37e-07,71;UBERON:0009618,1.37e-07,71;UBERON:0002100,1.52e-07,199;UBERON:0001225,2.21e-07,12;UBERON:0008987,2.21e-07,12;UBERON:0006555,2.33e-07,16;UBERON:0004819,2.33e-07,16;UBERON:0002049,3.28e-07,78;UBERON:0007798,3.28e-07,78;UBERON:0007524,3.69e-07,73;UBERON:0003077,3.78e-07,72;UBERON:0007285,3.78e-07,72;UBERON:0001737,5.80e-07,9;UBERON:0006554,8.38e-07,47;UBERON:0001134,9.48e-07,62;UBERON:0002036,9.48e-07,62;UBERON:0003082,9.48e-07,62 | |||
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| ||
|short_description=p1@TMEM93 | |short_description=p1@TMEM93 | ||
}} | }} |
Latest revision as of 17:45, 19 September 2015
Short description: | p1@TMEM93 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM93_5end |
Coexpression cluster: | C3614_Alveolar_Mesenchymal_Renal_Placental_embryonic_Corneal_Smooth |
Association with transcript: | 0bp_to_ENST00000248378, ENST00000397133, NM_001014764, NM_031298, uc002fwf.1, uc002fwg.1_5end |
EntrezGene: | TMEM93 |
HGNC: | 28430 |
UniProt: | Q9BV81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.23e-21 | 250 |
epithelial cell | 7.62e-20 | 253 |
mesodermal cell | 1.76e-14 | 121 |
lining cell | 8.98e-09 | 58 |
barrier cell | 8.98e-09 | 58 |
epithelial cell of nephron | 1.42e-08 | 15 |
kidney cell | 1.21e-07 | 17 |
kidney epithelial cell | 1.21e-07 | 17 |
squamous epithelial cell | 1.68e-07 | 63 |
electrically responsive cell | 1.82e-07 | 61 |
electrically active cell | 1.82e-07 | 61 |
kidney cortical cell | 2.21e-07 | 12 |
renal cortical epithelial cell | 2.21e-07 | 12 |
ectodermal cell | 3.40e-07 | 72 |
smooth muscle cell | 4.99e-07 | 43 |
smooth muscle myoblast | 4.99e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 5.49e-10 | 78 |
unilaminar epithelium | 1.46e-09 | 148 |
epithelial tube | 2.44e-09 | 117 |
mesenchyme | 1.02e-08 | 160 |
entire embryonic mesenchyme | 1.02e-08 | 160 |
nephron epithelium | 1.42e-08 | 15 |
renal tubule | 1.42e-08 | 15 |
nephron tubule | 1.42e-08 | 15 |
nephron | 1.42e-08 | 15 |
uriniferous tubule | 1.42e-08 | 15 |
nephrogenic mesenchyme | 1.42e-08 | 15 |
trunk mesenchyme | 2.54e-08 | 122 |
multilaminar epithelium | 3.58e-08 | 83 |
parenchyma | 9.39e-08 | 15 |
somite | 1.37e-07 | 71 |
presomitic mesoderm | 1.37e-07 | 71 |
presumptive segmental plate | 1.37e-07 | 71 |
dermomyotome | 1.37e-07 | 71 |
trunk paraxial mesoderm | 1.37e-07 | 71 |
trunk | 1.52e-07 | 199 |
cortex of kidney | 2.21e-07 | 12 |
renal parenchyma | 2.21e-07 | 12 |
excretory tube | 2.33e-07 | 16 |
kidney epithelium | 2.33e-07 | 16 |
vasculature | 3.28e-07 | 78 |
vascular system | 3.28e-07 | 78 |
dense mesenchyme tissue | 3.69e-07 | 73 |
paraxial mesoderm | 3.78e-07 | 72 |
presumptive paraxial mesoderm | 3.78e-07 | 72 |
larynx | 5.80e-07 | 9 |
urinary system structure | 8.38e-07 | 47 |
skeletal muscle tissue | 9.48e-07 | 62 |
striated muscle tissue | 9.48e-07 | 62 |
myotome | 9.48e-07 | 62 |